CSPI01G13990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G13990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Chr1: 9554922 .. 9555975 (+)
RNA-Seq Expression	CSPI01G13990
Synteny	CSPI01G13990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATGAGAGAAAAGAGAATACAAGGCAAGTTTTATTAGTTAAATCATTCCACATCCAAACTTCCAAAACCTCTCTTATATATTAATCCATTCTCAGTTCCTTCTTTTTGTAGTACTCTTCTTAAAGCAAAGCCTCTTCAATCAAAGTTGGCTTCTTTTCCTTAGCAGAGAACTATCCATCCTTGAGCATGGCAGGTCCTCCGCAGCCACTGTCACGATCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTGTTAGGCCGAAACGACTGAGCTACACGGTGGAAAGCGCTGAGGTCCATAACTTCGACATGACCGACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACTGCCACAGTTGGGTTCGGTGATCAAGACTTGTCTTTCGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGACTCTGTGTCGAAGGAATTGGCACTTGAAAGGTCAGCTGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAAGGTTATGGAATTTGGTTTTTTGCTTTTATCAAAAGTGTTTTTCTTTTTTCCTTCTTACTTTCTGAAAAAATTGTATTGTTGGTGTGGTTGTTGGGTTAATCTTTCAAGTGTTTAATTTGTGAGCTGTGATTGTTGCTTGGGTTTTTAATATGTATATGCTCTTTTTGATCACTTTTTTTTTGTTCAGTACAAATGTCAGTCCATTCTTTAACAAATAAGTGCAACCATTTGTAATTTGACTTGATTTAAATAATTGAAATTTTTTATGTA

mRNA sequence

AAATAATGAGAGAAAAGAGAATACAAGGCAAGTTTTATTAGTTAAATCATTCCACATCCAAACTTCCAAAACCTCTCTTATATATTAATCCATTCTCAGTTCCTTCTTTTTGTAGTACTCTTCTTAAAGCAAAGCCTCTTCAATCAAAGTTGGCTTCTTTTCCTTAGCAGAGAACTATCCATCCTTGAGCATGGCAGGTCCTCCGCAGCCACTGTCACGATCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTGTTAGGCCGAAACGACTGAGCTACACGGTGGAAAGCGCTGAGGTCCATAACTTCGACATGACCGACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACTGCCACAGTTGGGTTCGGTGATCAAGACTTGTCTTTCGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGACTCTGTGTCGAAGGAATTGGCACTTGAAAGGTCAGCTGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAAGGTTATGGAATTTGGTTTTTTGCTTTTATCAAAAGTGTTTTTCTTTTTTCCTTCTTACTTTCTGAAAAAATTGTATTGTTGGTGTGGTTGTTGGGTTAATCTTTCAAGTGTTTAATTTGTGAGCTGTGATTGTTGCTTGGGTTTTTAATATGTATATGCTCTTTTTGATCACTTTTTTTTTGTTCAGTACAAATGTCAGTCCATTCTTTAACAAATAAGTGCAACCATTTGTAATTTGACTTGATTTAAATAATTGAAATTTTTTATGTA

Coding sequence (CDS)

ATGGCAGGTCCTCCGCAGCCACTGTCACGATCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTGTTAGGCCGAAACGACTGAGCTACACGGTGGAAAGCGCTGAGGTCCATAACTTCGACATGACCGACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACTGCCACAGTTGGGTTCGGTGATCAAGACTTGTCTTTCGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGACTCTGTGTCGAAGGAATTGGCACTTGAAAGGTCAGCTGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAA

Protein sequence

MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDMTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLNIHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKTFKKTTCFTEV*

Homology

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BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 73/199 (36.68%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 6   QPLSRSGPSRILRFVIIFLVALI---ILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDM- 65
           QP ++  P R +  V+  +VAL+   +LVGLA+LI +LT+RPKRL YTVE+A V  F + 
Sbjct: 23  QPRAQPLPGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIG 82

Query: 66  -TDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 125
             D  +NA FS+ +++YNP K VSV Y S+  +    +Q ++   +SPF Q  KNE  + 
Sbjct: 83  NNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIE 142

Query: 126 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 185
             L + N  L    +++L  E+S G ++++++I AR+ +K  +++S  RTL+  C+PV++
Sbjct: 143 TQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMI 202

Query: 186 YLSKSKT--FKKTTCFTEV 198
            ++ S    F++  C T +
Sbjct: 203 NVTSSSLDGFQRVLCKTRL 221

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BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 4   PPQPLS--RSGPSR-----ILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEV 63
           PP P    R G  R     +L   +  +++LI+++G+A LI WL VRP+ + + V  A +
Sbjct: 18  PPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASL 77

Query: 64  HNFDMT--DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHK 123
             FD T  D  L  + +  V   NPNKR+ +YYD I A   +  +  S   L+PFYQ HK
Sbjct: 78  TRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHK 137

Query: 124 NEQWLNIHLNAQNFLLHDS-VSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRI 183
           N   L      QN ++ ++  S+ L  ER +G  ++++  + R+RFK+G  K      ++
Sbjct: 138 NTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKV 197

Query: 184 RCSPVIVYLSKS 186
            C  + + LS S
Sbjct: 198 DCDDLRLPLSTS 209

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BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 40/153 (26.14%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 33  LAVLIIWLTVRPKRLSYTVESAEVHNFDMTDTQ---LNASFSFGVRAYNPNKRVSVYYDS 92
           L + ++WL + P+R  +++  A++++ ++T +    LN+S    + + NPNK+V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  ITATVGF-GDQDLSFGVLSPFYQPHKNEQWLNIHLNAQNFLLHDSVSKELALERSAGEMD 152
           +     + G Q  S   L PFYQ H+    L   L      +  S   +++ ERS G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W S      + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

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BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.7e-15
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 16  ILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDMTDT---QLNASFSF 75
           IL  +   L+ + +L+G+A LIIWL  RP  + + V  A++  F +  T   + N   +F
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVRAYNPNKRVSVYYDSITATVGFGDQDLSFGV---LSPFYQPHKNEQWLNIHLNAQNFL 135
            +R  NPN+R+ VYYD I     +GDQ   FG+   +S FYQ HKN   +   L  Q  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT- 194
           L D    K+L  + ++    +D  ++ +IRFK G+ KS     +I+C   +   S S + 
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

[Close]

BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 16  ILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDM-TDTQLNASFSFGV 75
           IL  +   L+A+ +++G+A LI+WL  RP  + + V  A ++ F    +  L+ S     
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNF 110

Query: 76  RAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLNIHLNAQNF-LLHDS 135
              NPN+RV VYYD  + +  +GDQ      +S FYQ HKN   +   +  QN  +L D 
Sbjct: 111 TIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDG 170

Query: 136 VSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT 188
              +L  +  +G   ++  ++  +RFK    KS     +I+C  + + L  S +
Sbjct: 171 ARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNS 224

[Close]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL
Match: A0A0A0LVK3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.0e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL
Match: A0A5D3DBK2 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00070 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.4e-102
Identity = 190/197 (96.45%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQP SR+GPSRILRFVIIFLVALIILVGLAVLIIWLT+RPKRLSYTVESAEVHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MT+TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDL+FGVLSPFYQPHK+EQWLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSK+LALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL
Match: A0A1S3CLP6 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.4e-102
Identity = 190/197 (96.45%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQP SR+GPSRILRFVIIFLVALIILVGLAVLIIWLT+RPKRLSYTVESAEVHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MT+TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDL+FGVLSPFYQPHK+EQWLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSK+LALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL
Match: A0A6J1FH28 (uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 158/197 (80.20%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL
Match: A0A6J1I194 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82
Identity = 154/197 (78.17%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQ   R     ILR+VI+ LVALI+LVGL VLIIWLTVRPKRL YTVESA VHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIR+KVGVWK  HRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of CSPI01G13990 vs. NCBI nr
Match: KAE8652783.1 (hypothetical protein Csa_022856 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 8.2e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD
Sbjct: 27  MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 86

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN
Sbjct: 87  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 146

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 147 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 206

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 207 YLSKSKTFKKTTCFTEV 223

[Close]

BLAST of CSPI01G13990 vs. NCBI nr
Match: XP_011654115.1 (uncharacterized protein At1g08160 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 8.2e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 uncharacterized protein E6C27_scaffold43053G00810 [Cucumis melo var. makuwa] >TYK20878.1 uncharacterized protein E5676_scaffold284G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 190/197 (96.45%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQP SR+GPSRILRFVIIFLVALIILVGLAVLIIWLT+RPKRLSYTVESAEVHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MT+TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDL+FGVLSPFYQPHK+EQWLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHLNAQNFLLHDSVSK+LALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. NCBI nr
Match: XP_038894942.1 (uncharacterized protein At1g08160-like [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 179/197 (90.86%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQP  R+GPSRILRFV++F+VALIILVGLAVLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPPRAGPSRILRFVLMFIVALIILVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           MT TQLNASFSFGVRAYNPNKRV++YYDSITATVGFGDQDL+FGVLSPFYQPHK+E+WLN
Sbjct: 61  MTSTQLNASFSFGVRAYNPNKRVAIYYDSITATVGFGDQDLAFGVLSPFYQPHKDERWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IHL+AQNFLLHDSVSK+LALER+AGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLDAQNFLLHDSVSKDLALERAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKS+TFKKTTCFTEV
Sbjct: 181 YLSKSQTFKKTTCFTEV 197

[Close]

BLAST of CSPI01G13990 vs. NCBI nr
Match: KAG7020792.1 (hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 158/197 (80.20%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60
           MAGPPQ  SR   S ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSK K FK+T CFTE+
Sbjct: 181 YLSKDKEFKRTACFTEI 197

[Close]

BLAST of CSPI01G13990 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 79/195 (40.51%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 4   PPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDMT- 63
           P QPL R  PS ++ ++ + ++ LI +  +  LI WL  +PK+L YTVE+A V NF++T 
Sbjct: 16  PAQPLRR--PS-LICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTN 75

Query: 64  DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLNIH 123
           D  ++A+F F ++++NPN R+SVYY S+   V F DQ L+F  + PF+QP  N + ++  
Sbjct: 76  DNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDET 135

Query: 124 LNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYL 183
           L A+N  +  S  K+L  + S G++  ++++KAR+RFKVG+WKS+HRT +I+CS V V L
Sbjct: 136 LIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSL 195

Query: 184 SKSKTFKKTTCFTEV 198
           S+    + ++C  ++
Sbjct: 196 SQPNKSQNSSCDADI 207

[Close]

BLAST of CSPI01G13990 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 73/199 (36.68%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 6   QPLSRSGPSRILRFVIIFLVALI---ILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDM- 65
           QP ++  P R +  V+  +VAL+   +LVGLA+LI +LT+RPKRL YTVE+A V  F + 
Sbjct: 23  QPRAQPLPGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIG 82

Query: 66  -TDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 125
             D  +NA FS+ +++YNP K VSV Y S+  +    +Q ++   +SPF Q  KNE  + 
Sbjct: 83  NNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIE 142

Query: 126 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 185
             L + N  L    +++L  E+S G ++++++I AR+ +K  +++S  RTL+  C+PV++
Sbjct: 143 TQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMI 202

Query: 186 YLSKSKT--FKKTTCFTEV 198
            ++ S    F++  C T +
Sbjct: 203 NVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CSPI01G13990 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 4   PPQPLS--RSGPSR-----ILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEV 63
           PP P    R G  R     +L   +  +++LI+++G+A LI WL VRP+ + + V  A +
Sbjct: 18  PPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASL 77

Query: 64  HNFDMT--DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHK 123
             FD T  D  L  + +  V   NPNKR+ +YYD I A   +  +  S   L+PFYQ HK
Sbjct: 78  TRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHK 137

Query: 124 NEQWLNIHLNAQNFLLHDS-VSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRI 183
           N   L      QN ++ ++  S+ L  ER +G  ++++  + R+RFK+G  K      ++
Sbjct: 138 NTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKV 197

Query: 184 RCSPVIVYLSKS 186
            C  + + LS S
Sbjct: 198 DCDDLRLPLSTS 209

[Close]

BLAST of CSPI01G13990 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 40/153 (26.14%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 33  LAVLIIWLTVRPKRLSYTVESAEVHNFDMTDTQ---LNASFSFGVRAYNPNKRVSVYYDS 92
           L + ++WL + P+R  +++  A++++ ++T +    LN+S    + + NPNK+V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  ITATVGF-GDQDLSFGVLSPFYQPHKNEQWLNIHLNAQNFLLHDSVSKELALERSAGEMD 152
           +     + G Q  S   L PFYQ H+    L   L      +  S   +++ ERS G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W S      + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of CSPI01G13990 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 16  ILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDMTDT---QLNASFSF 75
           IL  +   L+ + +L+G+A LIIWL  RP  + + V  A++  F +  T   + N   +F
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVRAYNPNKRVSVYYDSITATVGFGDQDLSFGV---LSPFYQPHKNEQWLNIHLNAQNFL 135
            +R  NPN+R+ VYYD I     +GDQ   FG+   +S FYQ HKN   +   L  Q  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT- 194
           L D    K+L  + ++    +D  ++ +IRFK G+ KS     +I+C   +   S S + 
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

The following BLAST results are available for this feature:

BLAST of CSPI01G13990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	1.7e-28	36.68	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	2.1e-18	32.81	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FI03	2.1e-15	26.14	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9FNH6	3.7e-15	32.98	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	1.8e-14	29.31	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]

BLAST of CSPI01G13990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVK3	4.0e-105	100.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 ...	[more]
A0A5D3DBK2	5.4e-102	96.45	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CLP6	5.4e-102	96.45	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S...	[more]
A0A6J1FH28	1.7e-84	80.20	uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 ...	[more]
A0A6J1I194	2.8e-82	78.17	uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE...	[more]

BLAST of CSPI01G13990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652783.1	8.2e-105	100.00	hypothetical protein Csa_022856 [Cucumis sativus]	[more]
XP_011654115.1	8.2e-105	100.00	uncharacterized protein At1g08160 [Cucumis sativus]	[more]
XP_008464346.1	1.1e-101	96.45	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 unchar...	[more]
XP_038894942.1	2.8e-97	90.86	uncharacterized protein At1g08160-like [Benincasa hispida]	[more]
KAG7020792.1	1.2e-84	80.20	hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CSPI01G13990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	1.9e-38	40.51	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	1.2e-29	36.68	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	1.5e-19	32.81	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G53730.1	1.5e-16	26.14	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	2.6e-16	32.98	NDR1/HIN1-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 74..175 e-value: 3.5E-14 score: 53.2
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 11..196
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 11..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13990.1	CSPI01G13990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma