CSPI01G13920 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G13920
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pheophorbide a oxygenase family protein with Rieske domain
Location	Chr1: 9521569 .. 9524095 (-)
RNA-Seq Expression	CSPI01G13920
Synteny	CSPI01G13920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGGTAAGGGAGGGCCAATGTGAAAGAACTTGTTTCAATTAAACTTGAAATTTGCACCAGTGGTTTAGTTATTGATTGAATCGTTATGCTTGTTTGTGTTTCTGTTCTTTCTGTTTCTGATGGATGCCTAGTGAAAGAAATGTGTCACATATAAAGAACCAAAAAACTTCAATGGTACCTGCTGGGTGCTGTTAAATATCTACTATGATTTAGAAGAGATTGTGTTTTCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATATGGCAGTACTGTACTTCGAGTACAGTAGTAAACTTGGTCTAGAAAATCACATTTGTTTTTTGTTGAACATCTCAATGTCTTGCTTCTGAAAAGGAACATCGTCACAGGTGACAGGGAGGCGAGACTGGGCTTAACCTTTACCTTTCAAGTTGAATTCTAATGGTTCCTGTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTGCTGTATTCACATTTGAATAATGTATAGCTTAAGATTGTTGGAACCATCCCTTGCATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGTGATTAGGTACCTCATGCATTAAGCGAAACATTTGTGGTAGCTTAGTATAATGGCTGACAGAATGATAGTTTATTGACAGTGAGCTCTCTCTCTCAATTCTATCCCAAATTTGACCTGCCTTCTCTTGCATCTCTGTCTTCCTTTTAAACATCTCACTACTAACAACCTAACTATTTCACTTGCTTTTCCCAAACATATGCATAGAAAGTTTCTTTTCAATGATTATTTTACCCCTTGATCCTAACGTATGACCAAGTGGGCATGGGCATAAGCTTCAGTCGCTACCAAGTGTCAGTTTGTGTTATACATGCAAGGAAAAGAAAAAAAAAATCATTTCTCACTCTTTCTTTTTGGAAGCATTCCTGGATGCAAATTTTAATAACTTTAGTATGAGGAGGTAAGTATTATTCTTAAGAAAATTTTTAATATTTGAAGCAAAGTATTTCTATTAATACTGTAGAGTTGGAAACGGTAGTTAATAATAAGTGACCAGAGGAACCCAAGCACGTGAGACTTGAGACTTGAGTGTATTTGACCTCTTTTAGGTTTCGGAATTTTTATAATATTTCCTCTACGAGAAAGACAATATGTGCCATTTGAAATTATAGCTCTAGGAAATGGAATGCAAAAGGAAATTAGAAAACTTTGGTAGGAAAGGTAACGTTGATGTTAGGAAAATTGCAAGTGCATTTGCTGTGCATCTTTGATAAAAGGAATGTGTCATCAGTTATGGAGGTGAGAGGATACTGAGAGGACGGCAATTGAACCATAGCTCCAAGTTAGATGCAATGAGCATGGGGTACGAAATGAATAACGGAGTAGTCTGAAATAAGTGTTCCAAGTAAGAGTACACGGGATTTATTAATTGCCAAAGTAGGTTTGGACTGGGTGAGCTTTTTGGAATGTACATCCTCATTCCATCTTACGCATTCAAGAAAGAAGGCAAGTCAAGGCTGATAGTTAACTGTTGTGTGGTTTAAGGAAAGGAGAATTGAATAGTAAGAACTAACTAGAGGTTCTATAGCAACACCCTACTGAATTTATAGGCAACTGTTTCTACATTCTATTCCTTTTGTCTAAGTGTTAAACATTACGAATCCCTTATAAACAAATTCTTATAGGTTTGAACTTTTAATGTAAACTTTTCTTCAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTAAGCAGTCCGTGTTAATTAAATCTCTTTCTTATTTTTACGATATATTATCATCTCATTCCCTACCGTTATTGACCATTCAATATGCAACAATACGTTGTGATATTACAGTGTTTGACTTCCTAGTTTGCTTTTTCTAGTAGGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGTTCGACAAAATGTAAATAAGAATGCACTAAAATAACGTTTACATCAACACAAGCGGATTGTTTGGTGCTAGCATTTCAAAATTGGCTGAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

mRNA sequence

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Coding sequence (CDS)

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Protein sequence

MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLVRNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDERHHGKGQPKWFKACSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF*

Homology

[Close]

BLAST of CSPI01G13920 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 94/232 (40.52%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 225 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGPWGFQG 284

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R+T  F+                        + I  F   M       +V   R
Sbjct: 285 ANDDSPRITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSAR 344

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+ +             
Sbjct: 345 NFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQ-EKVFLAKSMESPDYDVNKQY 404

[Close]

BLAST of CSPI01G13920 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.8e-30
Identity = 87/230 (37.83%), Postives = 104/230 (45.22%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           P FS+V I+ DL+YG DTLMENVSDPSHI+ AHH+                    W    
Sbjct: 219 PAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHKVTGRRDRARPLPFKMESSGAWGYSG 278

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++ +F+                        + I  F   M       +V   R
Sbjct: 279 SNSGNPRISATFVAPCYALNKIEIDTKLPIFGDQKWVIWICSFNIPMAPGKTRSIVCSAR 338

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFSMPG AWWQ+VPRW+ HWTSN VYDGDMIVLQG  E IF+               
Sbjct: 339 NFFQFSMPGKAWWQLVPRWYEHWTSNLVYDGDMIVLQGQ-EKIFLSASKESSADINQQYT 398

[Close]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL
Match: A0A0A0LST3 (PaO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.7e-67
Identity = 134/173 (77.46%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWL 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFID--- 120
           LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQGSGEDIFID   
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF 165
           E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYP------------TIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL
Match: A0A6J1DFC6 (pheophorbide a oxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020548 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.0e-37
Identity = 102/230 (44.35%), Postives = 113/230 (49.13%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 237 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSG 296

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 297 ANKGNPRISAKFVAPCYYINKVEIDTKLPVLGDQKWVIWICSFNVPMGPGKTRSIVCSAR 356

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+ +             
Sbjct: 357 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKAMEDSTDVNKEYT 416

[Close]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL
Match: A0A6P3Z915 (pheophorbide a oxygenase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107410684 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 98/230 (42.61%), Postives = 110/230 (47.83%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 252 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGFAG 311

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 312 ANEGNPRISAEFVAPCYYMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 371

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E             
Sbjct: 372 NFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSESMEGSTDVNKEYT 431

[Close]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL
Match: A0A6P3Z2T8 (pheophorbide a oxygenase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107405855 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 98/230 (42.61%), Postives = 110/230 (47.83%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 250 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGFAG 309

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 310 ANEGNPRISAEFVAPCYYMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 369

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E             
Sbjct: 370 NFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSESMEGSTDVNKEYT 429

[Close]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL
Match: A0A2P6QGN9 (Putative pheophorbide a oxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0056561 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.6e-35
Identity = 96/230 (41.74%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 236 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEDSGPWGFSG 295

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R+T  F+                        + I  F   M       +V   R
Sbjct: 296 ANEGNPRITAKFIAPCYYLNKIEIDTKLPLVGDQKWVIWICSFNVPMAPGKTRSIVCSAR 355

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFSMPGPAWWQV+PRWH HWTSNKVYDGDMIVLQG  E IF+ +             
Sbjct: 356 NFFQFSMPGPAWWQVIPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKSKEEFGDVNKQYT 415

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: KGN64853.1 (hypothetical protein Csa_022799 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 9.6e-67
Identity = 134/173 (77.46%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWL 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFID--- 120
           LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQGSGEDIFID   
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF 165
           E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYP------------TIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: XP_022152935.1 (pheophorbide a oxygenase, chloroplastic [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 102/230 (44.35%), Postives = 113/230 (49.13%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 237 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSG 296

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 297 ANKGNPRISAKFVAPCYYINKVEIDTKLPVLGDQKWVIWICSFNVPMGPGKTRSIVCSAR 356

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+ +             
Sbjct: 357 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKAMEDSTDVNKEYT 416

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: XP_015873629.1 (pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 98/230 (42.61%), Postives = 110/230 (47.83%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 252 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGFAG 311

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 312 ANEGNPRISAEFVAPCYYMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 371

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E             
Sbjct: 372 NFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSESMEGSTDVNKEYT 431

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: XP_015868436.1 (pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 98/230 (42.61%), Postives = 110/230 (47.83%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 250 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGFAG 309

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R++  F+                        + I  F   M       +V   R
Sbjct: 310 ANEGNPRISAEFVAPCYYMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 369

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E             
Sbjct: 370 NFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSESMEGSTDVNKEYT 429

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: XP_024156933.1 (pheophorbide a oxygenase, chloroplastic [Rosa chinensis] >PRQ33345.1 putative pheophorbide a oxygenase [Rosa chinensis])

HSP 1 Score: 157.9 bits (398), Expect = 7.4e-35
Identity = 96/230 (41.74%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 236 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEDSGPWGFSG 295

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R+T  F+                        + I  F   M       +V   R
Sbjct: 296 ANEGNPRITAKFIAPCYYLNKIEIDTKLPLVGDQKWVIWICSFNVPMAPGKTRSIVCSAR 355

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFSMPGPAWWQV+PRWH HWTSNKVYDGDMIVLQG  E IF+ +             
Sbjct: 356 NFFQFSMPGPAWWQVIPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKSKEEFGDVNKQYT 415

[Close]

BLAST of CSPI01G13920 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35
Identity = 94/232 (40.52%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 225 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGPWGFQG 284

Query: 62  ------RLTQSFL-----------------------YLAINGFAPSMCQWLLEKLV---R 121
                 R+T  F+                        + I  F   M       +V   R
Sbjct: 285 ANDDSPRITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSAR 344

Query: 122 NFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------- 144
           NFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+ +             
Sbjct: 345 NFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQ-EKVFLAKSMESPDYDVNKQY 404

The following BLAST results are available for this feature:

BLAST of CSPI01G13920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYC2	3.8e-34	40.52	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
Q0DV66	9.8e-30	37.83	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CSPI01G13920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LST3	4.7e-67	77.46	PaO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV...	[more]
A0A6J1DFC6	5.0e-37	44.35	pheophorbide a oxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6P3Z915	1.6e-35	42.61	pheophorbide a oxygenase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC...	[more]
A0A6P3Z2T8	1.6e-35	42.61	pheophorbide a oxygenase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC...	[more]
A0A2P6QGN9	3.6e-35	41.74	Putative pheophorbide a oxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g00...	[more]

BLAST of CSPI01G13920 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64853.1	9.6e-67	77.46	hypothetical protein Csa_022799 [Cucumis sativus]	[more]
XP_022152935.1	1.0e-36	44.35	pheophorbide a oxygenase, chloroplastic [Momordica charantia]	[more]
XP_015873629.1	3.3e-35	42.61	pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba]	[more]
XP_015868436.1	3.3e-35	42.61	pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba]	[more]
XP_024156933.1	7.4e-35	41.74	pheophorbide a oxygenase, chloroplastic [Rosa chinensis] >PRQ33345.1 putative ph...	[more]

BLAST of CSPI01G13920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44880.1	2.7e-35	40.52	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 57..105 e-value: 1.2E-7 score: 31.7
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 65..113 coord: 114..144
None	No IPR available	PANTHER	PTHR21266:SF24	PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC	coord: 114..144
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 2..36
None	No IPR available	PANTHER	PTHR21266:SF24	PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC	coord: 2..36 coord: 65..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13920.1	CSPI01G13920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0032441	pheophorbide a oxygenase activity