CSPI01G12310 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G12310
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 7778756 .. 7779039 (-)
RNA-Seq ExpressionCSPI01G12310
SyntenyCSPI01G12310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGTGTAGAAGCTGATGATTAGGTTTATGGAGGGGCCAGAGATGGCCCACAGGGGCTGTGATTGCCTGGAATTTGACGTGCAGAGCCGTAGTATTGAGTAATATATAAGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

mRNA sequence

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

Coding sequence (CDS)

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

Protein sequence

MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALIRLGCLAVRQTPAVHDEWDCGRLLI*
Homology
[Close]
BLAST of CSPI01G12310 vs. ExPASy TrEMBL
Match: A0A0A0LUM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075040 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.0e-25
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALIRLGCLAVRQTPAVHDEWDCGRLLI 59
          MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAAL RLGCLAVRQTPAVHDEWDCGRLLI
Sbjct: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 58

The following BLAST results are available for this feature:
BLAST of CSPI01G12310 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G12310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUM66.0e-2598.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075040 PE=4 SV=1[more]
BLAST of CSPI01G12310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI01G12310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G12310.1CSPI01G12310.1mRNA