CSPI01G12300 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G12300
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ethylene-responsive transcription factor 12
Location	Chr1: 7772131 .. 7773050 (+)
RNA-Seq Expression	CSPI01G12300
Synteny	CSPI01G12300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTTGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACGTCTCCGGACCTTGGCCCACACCTACCTCTGCACAACAATTTTAAATGGTTAGAATAACAAAACATAAAAATTAGACAAATAAATAAATGAAACAATTCCTCAAATGCCCTTATCCAATATGAAAAAAAAAACAATTGTTAACTTAAACTCGACATACATTATAATTGAAATAATATATGCTACATAAAAATTTCCCAAAAATGTAAAGATTATAAAAGTTGTCGTTAATGGAAAAAACTTCATTTGTTCATCCTCCTCCTCCTCCCCCTCCCCCTCCCCCTCCTCCACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGATTCATTCAACAAACCAACCGGCGTTTTTTACGGACATCATTTTCTCATTTTCCCTTTTCATTTTTCATTTTTATTATTAACCGTCTTCTGTATCCACTTTTTCCACCCCCCAGATTTAAAGATAAAATATATAATATATATATGTGTAAATACAAGTTTTGGTGGATATTATTGATTGGTCTCTTCCACACTTTCTTTTTTTTTTATTTTATT

mRNA sequence

ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTTGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACATTATAAAAGTTGTCGTTAATGGAAAAAACTTCATTTGTTCATCCTCCTCCTCCTCCCCCTCCCCCTCCCCCTCCTCCACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGATTCATTCAACAAACCAACCGGCGTTTTTTACGGACATCATTTTCTCATTTTCCCTTTTCATTTTTCATTTTTATTATTAACCGTCTTCTGTATCCACTTTTTCCACCCCCCAGATTTAAAGATAAAATATATAATATATATATGTGTAAATACAAGTTTTGGTGGATATTATTGATTGGTCTCTTCCACACTTTCTTTTTTTTTTATTTTATT

Coding sequence (CDS)

ATGGCTTCCACTCGCGAAGGTCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAAATACGCGACCCTTGGAAGAAAACCCGTGTTTGGTTAGGCACTTTTGATACTCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCCGTTCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCCTCCCTGGTCTCTCCCTCGACCTCAACATTATAAAAGTTGTCGTTAATGGAAAAAACTTCATTTGTTCATCCTCCTCCTCCTCCCCCTCCCCCTCCCCCTCCTCCACTCGTTTTCTCCTCGGCGATTTCCTCCGTCACGGCGTCAGAAACGATATATGTAATCTCAATGTGGATGCCTCTCCGGTTCTTGTGGACTCAAGCGCTTCGGGTTCTTCCACCGCTTCGGCGTCGTTTATTGGTCACGTCCGACGTGGCCTCCCTTTTGATCTCAACGAGCCTCCACCGGTGTGGCTATGA

Protein sequence

MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDICNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL*

Homology

[Close]

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-38
Identity = 99/192 (51.56%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 1   MAST---REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSS--------SSPSPSPSSTRFLLGD 120
            KAKTNFP P   LSLDLN +    +      ++          ++P P P S+      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 ---FLRHGVRNDICNLNVDASPVLVDSSASGSSTASASF--IGH-----------VRRGL 166
              FLR GV ND  +        L  +S+  ++T+S  +  +G            VRRGL
Sbjct: 121 HRIFLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVTVRRGL 180

[Close]

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-25
Identity = 78/192 (40.62%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 4   TREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           ++E  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPLPG--------------------LSLDLNIIKVVVNGKNFICS-SSSSSPSPSPSS 123
           FP P                          D  II       +   +  S S P P P+ 
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRPPPAP 142

Query: 124 TRFLLGDFLRH----GVRNDICNLNVDASPVLVD-------SSASGSSTASASFIGHVRR 164
            +       ++     V  D C+ + D+S  +VD       +     + AS+SF    R+
Sbjct: 143 RQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSF----RK 202

[Close]

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-25
Identity = 57/72 (79.17%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 5  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPPLPGLSLDLN 77
            PLPG S  +N
Sbjct: 89 --PLPGESTTVN 98

[Close]

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-24
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3  STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP-----PPLPGL 72
          NFP     PP P L
Sbjct: 82 NFPIDSSSPPPPNL 95

[Close]

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 5  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPP 68
          P P
Sbjct: 83 PSP 85

[Close]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS SPSPSSTRFLLGDFLRHGVRNDIC
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS-SPSPSSTRFLLGDFLRHGVRNDIC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.3e-72
Identity = 143/166 (86.14%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS   S SS RFLLGDFLRHGVRND+C
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS---SSSSARFLLGDFLRHGVRNDMC 120

Query: 121 NLNVD-ASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLNVD ASPVLVD+SAS SSTASASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.3e-72
Identity = 143/166 (86.14%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS   S SS RFLLGDFLRHGVRND+C
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS---SSSSARFLLGDFLRHGVRNDMC 120

Query: 121 NLNVD-ASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLNVD ASPVLVD+SAS SSTASASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL
Match: A0A6J1KJH9 (ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111495799 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.4e-63
Identity = 127/165 (76.97%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPP   LSLDLN+        N+  SS++ S S S SS R LLGDFLRHG RND+C
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTT-CNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           N+NV+ASP LVDS     +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVNVEASPGLVDSRDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL
Match: A0A6J1EKE1 (ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111434133 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.0e-63
Identity = 129/171 (75.44%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSST------RFLLGDFLRHG 120
           KTNFPPP   LSLDLN+        N+  SSSSS+ + +PSS+      R LLGDFLRHG
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTT-CNWPSSSSSSAAAAAPSSSSSSSAARLLLGDFLRHG 120

Query: 121 VRNDICNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
            RND+CN+NV+ASP LVDSS    +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 ARNDLCNVNVEASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 166

[Close]

BLAST of CSPI01G12300 vs. NCBI nr
Match: XP_004146616.1 (ethylene-responsive transcription factor 12 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77
Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS SPSPSSTRFLLGDFLRHGVRNDIC
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS-SPSPSSTRFLLGDFLRHGVRNDIC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of CSPI01G12300 vs. NCBI nr
Match: KAE8652722.1 (hypothetical protein Csa_014191 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 5.7e-75
Identity = 147/162 (90.74%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS SPSPSSTRFLLGDFLRHGVRNDIC
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS-SPSPSSTRFLLGDFLRHGVRNDIC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 163
           NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP
Sbjct: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPP 161

[Close]

BLAST of CSPI01G12300 vs. NCBI nr
Match: XP_008442801.1 (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA0057008.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa] >TYK26435.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 143/166 (86.14%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPPLPGLSLDLN+        +    SSSSS   S SS RFLLGDFLRHGVRND+C
Sbjct: 61  KTNFPPPLPGLSLDLNVSGPWPTPTSAPPCSSSSS---SSSSARFLLGDFLRHGVRNDMC 120

Query: 121 NLNVD-ASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLNVD ASPVLVD+SAS SSTASASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of CSPI01G12300 vs. NCBI nr
Match: XP_038895107.1 (ethylene-responsive transcription factor 12 [Benincasa hispida])

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-68
Identity = 132/165 (80.00%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPP+PGLSLDLN     V+      +S++++PS   SS RFLLGDFLRHG RND+C
Sbjct: 61  KTNFPPPVPGLSLDLN-----VSSPWPTVTSAAAAPS---SSARFLLGDFLRHGARNDMC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           NLN +ASPVL+DSSA+ ++TA+ SFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNAEASPVLLDSSAASTATATTSFIGHVRRGLPFDLNEPPPVWL 157

[Close]

BLAST of CSPI01G12300 vs. NCBI nr
Match: XP_023001756.1 (ethylene-responsive transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62
Identity = 127/165 (76.97%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 120
           KTNFPPP   LSLDLN+        N+  SS++ S S S SS R LLGDFLRHG RND+C
Sbjct: 61  KTNFPPP---LSLDLNVSSTPTT-CNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLC 120

Query: 121 NLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 166
           N+NV+ASP LVDS     +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVNVEASPGLVDSRDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of CSPI01G12300 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-39
Identity = 99/192 (51.56%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 1   MAST---REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSS--------SSPSPSPSSTRFLLGD 120
            KAKTNFP P   LSLDLN +    +      ++          ++P P P S+      
Sbjct: 61  IKAKTNFPSP---LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQH 120

Query: 121 ---FLRHGVRNDICNLNVDASPVLVDSSASGSSTASASF--IGH-----------VRRGL 166
              FLR GV ND  +        L  +S+  ++T+S  +  +G            VRRGL
Sbjct: 121 HRIFLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVTVRRGL 180

[Close]

BLAST of CSPI01G12300 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 115.2 bits (287), Expect = 5.2e-26
Identity = 57/72 (79.17%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 5  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPPLPGLSLDLN 77
            PLPG S  +N
Sbjct: 89 --PLPGESTTVN 98

[Close]

BLAST of CSPI01G12300 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-25
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3  STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP-----PPLPGL 72
          NFP     PP P L
Sbjct: 82 NFPIDSSSPPPPNL 95

[Close]

BLAST of CSPI01G12300 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-24
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 3  STREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19 NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63 NFP 66
          NFP
Sbjct: 79 NFP 81

[Close]

BLAST of CSPI01G12300 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-23
Identity = 74/165 (44.85%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 4   TREGH---YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 63
           T EG+   YRGVRKRPWGRYAAEIRDP+KK+RVWLGTFDTPEEAA AYD  A   RG+KA
Sbjct: 12  TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKA 71

Query: 64  KTNFPPPLPGLSLDLNIIKVVVNGKNFICSSSSSSPSPSPSSTRFLLGDFLRHGVRNDIC 123
           KTNFP              +  +  +   S S SS   S      L  D +    R    
Sbjct: 72  KTNFP-----------CYNINAHCLSLTQSLSQSSTVESSFPNLNLGSDSV--SSRFPFP 131

Query: 124 NLNVDASPVLVDS-SASGSSTASASFIGHVRRG--LPFDLNEPPP 163
            + V A  ++ D  S S SS+     + +  R   L  DLN PPP
Sbjct: 132 KIQVKAGMMVFDERSESDSSSVVMDVVRYEGRRVVLDLDLNFPPP 163

The following BLAST results are available for this feature:

BLAST of CSPI01G12300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID6	3.4e-38	51.56	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9SXS8	3.3e-25	40.63	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q9FE67	7.3e-25	79.17	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
O80339	4.7e-24	72.97	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	1.1e-23	82.54	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]

BLAST of CSPI01G12300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSE4	1.7e-77	90.91	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=...	[more]
A0A5D3DSV2	8.3e-72	86.14	Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B631	8.3e-72	86.14	ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
A0A6J1KJH9	5.4e-63	76.97	ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EKE1	7.0e-63	75.44	ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of CSPI01G12300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146616.1	3.5e-77	90.91	ethylene-responsive transcription factor 12 [Cucumis sativus]	[more]
KAE8652722.1	5.7e-75	90.74	hypothetical protein Csa_014191 [Cucumis sativus]	[more]
XP_008442801.1	1.7e-71	86.14	PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA005700...	[more]
XP_038895107.1	1.8e-68	80.00	ethylene-responsive transcription factor 12 [Benincasa hispida]	[more]
XP_023001756.1	1.1e-62	76.97	ethylene-responsive transcription factor 12 [Cucurbita maxima]	[more]

BLAST of CSPI01G12300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28360.1	2.4e-39	51.56	ERF domain protein 12	[more]
AT5G44210.1	5.2e-26	79.17	erf domain protein 9	[more]
AT1G50640.1	3.4e-25	72.97	ethylene responsive element binding factor 3	[more]
AT3G15210.1	4.8e-24	80.95	ethylene responsive element binding factor 4	[more]
AT1G28370.1	3.1e-23	44.85	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 31..47 score: 70.59 coord: 9..20 score: 66.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 8..71 e-value: 3.3E-37 score: 139.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..57 e-value: 1.7E-14 score: 53.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 8..65 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 8..65 e-value: 6.81291E-32 score: 106.972
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 8..66 e-value: 2.5E-27 score: 96.8
None	No IPR available	PANTHER	PTHR31677:SF116	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE	coord: 1..152
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..152
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G12300.1	CSPI01G12300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity