CSPI01G12180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G12180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionnon-classical arabinogalactan protein 31
LocationChr1: 7692014 .. 7693195 (+)
RNA-Seq ExpressionCSPI01G12180
SyntenyCSPI01G12180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCAATGCTTCAATAGTCTCTCTCTCGTATCATTACCAAATGGCTTCTCTTACTGCCAATGCTTCTTTCCTTCTCCTCCTCCTCTGCTGCACCCTCCTCAATGCCTTCCAAGCCGCTGCATATTCCTCCACCCCAGCCCCGGCTCCCACTCACCACAACGCCCACCACCCTGTAGCTGCCCCAACTCCAAGCTTCCACCACCGCGCCCACCACCACCACCACCACTCCCCTTCCCAGTCTCCGACTTCCCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACTTCACCCTCCGGCTCACTACGCCCCTGTTCCCTCACCCGCTCATTCACCTAAACCGTCCACCAACATCCCAAGAAGCTTCGTTCAAGTCCAAGGCGTTGTTTATTGCAAGTCTTGCAAGTACCCCGACGTCGATACTCTTCTCGGAGCTAAACCACTTTCCGGTAAGTTCCAAGATCGATTTTTTACATAAAAATAACCATCTTTACTGTAAACTCACATAAGATTTAGCGGTAATTTTACTAATTTTTTAAACAATTTAAAATGGGTAGTTTTTTATATCGCCCCCACTGCCCGAAATGGCCTTGGTTGCTTTGTTTTTTTTTTTTTTTCTTTCAGGCGCTACAGTGAAGTTGTCATGCAAGAACACCAAGTACGCTCCGGCGGTGGAAACAGCCACCAGCGACGAGAATGGGTACTTCCGTCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGATGCAAGGTGTATTTAGTGAAGTCGCCGGATAGCAAATGCGAAAAAGCGTCGAAAATGAACGGGGGAGTGGATGGAGCGGAGTTAAAGCCGGCGAGAGCATTCACGGACGAGGAGAAGAAGCCGGTTGTGCTTTACAACGTTGGGCCATTGGCATTTGAACCCACCTGTAGTCGTTGAAGTGAAAGTGGGGGAGAGGAGAGGGGTAGTTAAGTAATATTTTGGGGGTTTTGTATTGGTAATGACTATGATATATGGCTTTGGATTCCTGCACCTTTTCTAGGGTATTGTGACATTGTTGTTTTTATGATATCCTTTATATGGACTCGAGTTTCTATTTTATTTCCTACCCCTTCTTTCTAAAACAAAAAATTAATCTTTAACATAAAAATATTTATAATAATAATCTCAACTTTTATTA

mRNA sequence

TCCCAATGCTTCAATAGTCTCTCTCTCGTATCATTACCAAATGGCTTCTCTTACTGCCAATGCTTCTTTCCTTCTCCTCCTCCTCTGCTGCACCCTCCTCAATGCCTTCCAAGCCGCTGCATATTCCTCCACCCCAGCCCCGGCTCCCACTCACCACAACGCCCACCACCCTGTAGCTGCCCCAACTCCAAGCTTCCACCACCGCGCCCACCACCACCACCACCACTCCCCTTCCCAGTCTCCGACTTCCCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACTTCACCCTCCGGCTCACTACGCCCCTGTTCCCTCACCCGCTCATTCACCTAAACCGTCCACCAACATCCCAAGAAGCTTCGTTCAAGTCCAAGGCGTTGTTTATTGCAAGTCTTGCAAGTACCCCGACGTCGATACTCTTCTCGGAGCTAAACCACTTTCCGGCGCTACAGTGAAGTTGTCATGCAAGAACACCAAGTACGCTCCGGCGGTGGAAACAGCCACCAGCGACGAGAATGGGTACTTCCGTCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGATGCAAGGTGTATTTAGTGAAGTCGCCGGATAGCAAATGCGAAAAAGCGTCGAAAATGAACGGGGGAGTGGATGGAGCGGAGTTAAAGCCGGCGAGAGCATTCACGGACGAGGAGAAGAAGCCGGTTGTGCTTTACAACGTTGGGCCATTGGCATTTGAACCCACCTGTAGTCGTTGAAGTGAAAGTGGGGGAGAGGAGAGGGGTAGTTAAGTAATATTTTGGGGGTTTTGTATTGGTAATGACTATGATATATGGCTTTGGATTCCTGCACCTTTTCTAGGGTATTGTGACATTGTTGTTTTTATGATATCCTTTATATGGACTCGAGTTTCTATTTTATTTCCTACCCCTTCTTTCTAAAACAAAAAATTAATCTTTAACATAAAAATATTTATAATAATAATCTCAACTTTTATTA

Coding sequence (CDS)

ATGGCTTCTCTTACTGCCAATGCTTCTTTCCTTCTCCTCCTCCTCTGCTGCACCCTCCTCAATGCCTTCCAAGCCGCTGCATATTCCTCCACCCCAGCCCCGGCTCCCACTCACCACAACGCCCACCACCCTGTAGCTGCCCCAACTCCAAGCTTCCACCACCGCGCCCACCACCACCACCACCACTCCCCTTCCCAGTCTCCGACTTCCCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACTTCACCCTCCGGCTCACTACGCCCCTGTTCCCTCACCCGCTCATTCACCTAAACCGTCCACCAACATCCCAAGAAGCTTCGTTCAAGTCCAAGGCGTTGTTTATTGCAAGTCTTGCAAGTACCCCGACGTCGATACTCTTCTCGGAGCTAAACCACTTTCCGGCGCTACAGTGAAGTTGTCATGCAAGAACACCAAGTACGCTCCGGCGGTGGAAACAGCCACCAGCGACGAGAATGGGTACTTCCGTCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGATGCAAGGTGTATTTAGTGAAGTCGCCGGATAGCAAATGCGAAAAAGCGTCGAAAATGAACGGGGGAGTGGATGGAGCGGAGTTAAAGCCGGCGAGAGCATTCACGGACGAGGAGAAGAAGCCGGTTGTGCTTTACAACGTTGGGCCATTGGCATTTGAACCCACCTGTAGTCGTTGA

Protein sequence

MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHHHHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCSR*
Homology
BLAST of CSPI01G12180 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.9e-28
Identity = 98/224 (43.75%), Postives = 118/224 (52.68%), Query Frame = 0

Query: 32  PAPAPTHHNAHHPVAAPTPSFHHRAHHHHHHSPSQSPTSH--HHPHSPSPAPSPVYPLHP 91
           P   P +     PV  PT        +    +P + PT      P SP   P    P++P
Sbjct: 139 PVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYP 198

Query: 92  PAHYAPVPSPAHSP-KPSTNIP-------RSFVQVQGVVYCKSCKYPDVDTLLGAKPLSG 151
           P   APV  P   P KP    P       RS V V+G VYCKSCKY   +TLLGAKP+ G
Sbjct: 199 PTK-APVKPPVSPPTKPPVTPPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEG 258

Query: 152 ATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYAFHRCKVYLVKSPDSKCEKASK 211
           ATVKL CK+ K   A    T+D+NGYF L APK VT++ F  C+VYLVKS D KC K SK
Sbjct: 259 ATVKLVCKSKKNITA--ETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSK 318

Query: 212 MNGGVDGAELKPARAFTDE----EKKPVVLYNVGPLAFEPTCSR 242
           + GG  GAELKP +          K    L+NVGP AF P+C +
Sbjct: 319 LFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of CSPI01G12180 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 91/249 (36.55%), Postives = 126/249 (50.60%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAY---SSTPAPAPTHHNAHHPVAAPTPSFHHRAH 60
           M  +  + S  L  L C   + F        SS P  +   H    P+  PT        
Sbjct: 1   MGIIGKSVSLTLFALLCFTSSVFTLGVNQPGSSDPFHSLPQHLPLPPIKLPTLPPAKAPI 60

Query: 61  HHHHHSPSQSPTSHHHPHSPSPAPSPV-YPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQV 120
               + P+++P     P  P PA +P+  P  PP    PV  P + PK +    ++ V V
Sbjct: 61  KLPAYPPAKAPIK--LPTLP-PAKAPIKLPTLPPIK-PPVLPPVYPPKYN----KTLVAV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           +GVVYCK+CKY  V+ + GAKP+  A V+L CKN K   ++    +D+NGYF L APK V
Sbjct: 121 RGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKTV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPAR----AFTDEEKKPVVLYNVGP 240
           T+Y    C+ +LVKSPD+KC K S ++ G  G+ LKP      + T        +YNVGP
Sbjct: 181 TNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGP 239

Query: 241 LAFEPTCSR 242
            AFEPTC +
Sbjct: 241 FAFEPTCPK 239

BLAST of CSPI01G12180 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17
Identity = 88/242 (36.36%), Postives = 104/242 (42.98%), Query Frame = 0

Query: 31  TPAPAPTHHNAHHPVAAPTPSFHHRAHHHHHHSPSQSPTSHHHPHSPSPAPSPVYPLHPP 90
           +P+PA        PV AP+P            SP+  P +   P  P    SP+ P  PP
Sbjct: 190 SPSPAKQPPPPPPPVKAPSP------------SPATQPPTKQPPPPPRAKKSPLLPPPPP 249

Query: 91  AHYAPV----PSPAHS-------PKPSTN---IPRSFVQ--------------VQGVVYC 150
             Y PV    PSPA         P P  N   IPR                  V G+VYC
Sbjct: 250 VAYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSGLVYC 309

Query: 151 KSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYAFH 210
           KSC    V TLL A  L GA VKL C   K    V+ AT+D  G FR+  PK++T+    
Sbjct: 310 KSCNSYGVPTLLNASLLQGAVVKLICYGKK--TMVQWATTDNKGEFRI-MPKSLTTADVG 369

Query: 211 RCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVV--------LYNVGPLA 237
           +CKVYLVKSP+  C   +  NGG  G  LKP           VV        LY VGP  
Sbjct: 370 KCKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQPPMSDLYGVGPFI 416

BLAST of CSPI01G12180 vs. ExPASy TrEMBL
Match: A0A0A0LXF0 (Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHR HHHH
Sbjct: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRGHHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HHSP+QSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV
Sbjct: 61  HHSPTQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS
Sbjct: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240

Query: 241 R 242
           R
Sbjct: 241 R 241

BLAST of CSPI01G12180 vs. ExPASy TrEMBL
Match: A0A5A7URZ5 (Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00870 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 218/244 (89.34%), Postives = 225/244 (92.21%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MASLTANASFL+LLL C  LNAFQAAAYSSTPAPAPTHHNAHHPVAAP PSFHH  HHHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHNAHHPVAAPAPSFHHHGHHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYA----PVPSPAHSPKPSTNIPRSFVQV 120
           HHSPSQSPTSHHHPHSPSPAPSPVYP  P AHYA    PVPSP HSPKPST +PRSFV+V
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           QGVVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240
           TSYAFHRCKVYLV+SPDS C+KASK+NGG DGAELKPARAFTDEEKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of CSPI01G12180 vs. ExPASy TrEMBL
Match: A0A1S3B5Q3 (non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 218/244 (89.34%), Postives = 225/244 (92.21%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MASLTANASFL+LLL C  LNAFQAAAYSSTPAPAPTHHNAHHPVAAP PSFHH  HHHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHNAHHPVAAPAPSFHHHGHHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYA----PVPSPAHSPKPSTNIPRSFVQV 120
           HHSPSQSPTSHHHPHSPSPAPSPVYP  P AHYA    PVPSP HSPKPST +PRSFV+V
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           QGVVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240
           TSYAFHRCKVYLV+SPDS C+KASK+NGG DGAELKPARAFTDEEKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of CSPI01G12180 vs. ExPASy TrEMBL
Match: A0A6J1EHN2 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111434378 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.0e-88
Identity = 181/241 (75.10%), Postives = 193/241 (80.08%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           M S+   A  +LLL C   LNAFQAAA   +P  AP   + H+PV    PS HH  HHHH
Sbjct: 1   MGSVATGAVIVLLLGCA--LNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HH PSQSP  HHH H  SPAPSPVY   PPAHYAPVPSP   PK ST IPRSFV+VQGVV
Sbjct: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSC YP VDTLLGAKPL+GATVKLSCKNTKYAP +ETAT+D+NGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKVYLVKSPDS C K SKMNGG DGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 FHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 236

Query: 241 R 242
           R
Sbjct: 241 R 236

BLAST of CSPI01G12180 vs. ExPASy TrEMBL
Match: A0A6J1KM21 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111495792 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.2e-82
Identity = 175/240 (72.92%), Postives = 188/240 (78.33%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           M S+   A  +LLL C   LNAFQAAA   +P PAP   + H+PV    PS     HHHH
Sbjct: 1   MGSVATCAVIVLLLGCA--LNAFQAAANHGSPTPAPRPDDRHYPVPVAAPSH----HHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HH PSQSP  HHH H  SPAPSPVY   PPAHYAPV      PK ST IPRSFV+VQGVV
Sbjct: 61  HHPPSQSPIYHHHAH--SPAPSPVYAPPPPAHYAPV----QPPKRSTYIPRSFVEVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSC YP VDTLLGAKPL+GA VKLSCKNTKYAP VETAT+D+NGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCHYPGVDTLLGAKPLNGAAVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKV+LVKSPDS C K SKMNGGVDGAELKPA+AFTD EKKPVVLYNVGPLAFEP+C+
Sbjct: 181 FHRCKVHLVKSPDSSCSKMSKMNGGVDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPSCA 228

BLAST of CSPI01G12180 vs. NCBI nr
Match: XP_004146606.2 (non-classical arabinogalactan protein 31 [Cucumis sativus] >KGN64686.1 hypothetical protein Csa_013639 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 4.0e-130
Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHR HHHH
Sbjct: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRGHHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HHSP+QSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV
Sbjct: 61  HHSPTQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS
Sbjct: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240

Query: 241 R 242
           R
Sbjct: 241 R 241

BLAST of CSPI01G12180 vs. NCBI nr
Match: XP_008442660.1 (PREDICTED: non-classical arabinogalactan protein 31 [Cucumis melo] >KAA0056996.1 non-classical arabinogalactan protein 31 [Cucumis melo var. makuwa] >TYK26423.1 non-classical arabinogalactan protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115
Identity = 218/244 (89.34%), Postives = 225/244 (92.21%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MASLTANASFL+LLL C  LNAFQAAAYSSTPAPAPTHHNAHHPVAAP PSFHH  HHHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHNAHHPVAAPAPSFHHHGHHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYA----PVPSPAHSPKPSTNIPRSFVQV 120
           HHSPSQSPTSHHHPHSPSPAPSPVYP  P AHYA    PVPSP HSPKPST +PRSFV+V
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           QGVVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240
           TSYAFHRCKVYLV+SPDS C+KASK+NGG DGAELKPARAFTDEEKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of CSPI01G12180 vs. NCBI nr
Match: XP_038876988.1 (non-classical arabinogalactan protein 31 [Benincasa hispida])

HSP 1 Score: 387.5 bits (994), Expect = 8.5e-104
Identity = 204/245 (83.27%), Postives = 215/245 (87.76%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           MAS+TANASFL+LLLCC+ +NAFQ AAY  TPAPAP+HH  HHPVAAPTPSFHH   HH 
Sbjct: 1   MASVTANASFLVLLLCCS-INAFQTAAYHGTPAPAPSHHGGHHPVAAPTPSFHHH-RHHR 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSP----KPSTNIPRSFVQV 120
           HH+PS SP SHHHPH  SPAPSPVYP  P AHYAPVPSP  SP    KPST +PRSFV+V
Sbjct: 61  HHAPSPSPISHHHPH--SPAPSPVYPSPPTAHYAPVPSPVPSPVPPSKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           QGVVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240
           TSYAFHRCKVYLVKSPDS C KASK+NGG DGAELKPARAFTD+EKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFE 240

Query: 241 PTCSR 242
           PTC R
Sbjct: 241 PTCGR 241

BLAST of CSPI01G12180 vs. NCBI nr
Match: KAG7019613.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.7 bits (857), Expect = 6.5e-88
Identity = 182/241 (75.52%), Postives = 193/241 (80.08%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           M S+   A  +LLL C   LNAFQAAA   +P  AP   + H+PV    PS HH  HHHH
Sbjct: 1   MGSVATGAVIVLLLGCA--LNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HH PSQSP  HHH H  SPAPSPVY   PPAHYAPVPSP   PK ST IPRSFV+VQGVV
Sbjct: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSC YP VDTLLGAKPL+GATVKLSCKNTKYAP VETAT+D+NGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKVYLVKSPDS C K SKMNGG DGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 FHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 236

Query: 241 R 242
           R
Sbjct: 241 R 236

BLAST of CSPI01G12180 vs. NCBI nr
Match: XP_022927607.1 (non-classical arabinogalactan protein 31-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87
Identity = 181/241 (75.10%), Postives = 193/241 (80.08%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRAHHHH 60
           M S+   A  +LLL C   LNAFQAAA   +P  AP   + H+PV    PS HH  HHHH
Sbjct: 1   MGSVATGAVIVLLLGCA--LNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60

Query: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120
           HH PSQSP  HHH H  SPAPSPVY   PPAHYAPVPSP   PK ST IPRSFV+VQGVV
Sbjct: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVV 120

Query: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180
           YCKSC YP VDTLLGAKPL+GATVKLSCKNTKYAP +ETAT+D+NGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240
           FHRCKVYLVKSPDS C K SKMNGG DGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 FHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 236

Query: 241 R 242
           R
Sbjct: 241 R 236

BLAST of CSPI01G12180 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-32
Identity = 109/287 (37.98%), Postives = 128/287 (44.60%), Query Frame = 0

Query: 29  SSTPAPAPTHHNAHHPVAAPTPSFHHRAH-HHHHHSPSQSPT------------------ 88
           S  PAPAP HH  HH    P P  HH  H H H H P++SP                   
Sbjct: 35  SLAPAPAPYHHGHHH----PHPPHHHHPHPHPHPHPPAKSPVKPPVKAPVSPPAKPPVKP 94

Query: 89  ---------------------------------------SHHHPHSPSPAPSPVYPLHPP 148
                                                  +   P +  P   PVYP   P
Sbjct: 95  PVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKP 154

Query: 149 AHYAPVPSPAHSP-----KPSTNIP-------RSFVQVQGVVYCKSCKYPDVDTLLGAKP 208
             Y P  +P   P     KP    P       RS V V+G VYCKSCKY   +TLLGAKP
Sbjct: 155 PVYPPTKAPVKPPVSPPTKPPVTPPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKP 214

Query: 209 LSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYAFHRCKVYLVKSPDSKCEK 242
           + GATVKL CK+ K   A    T+D+NGYF L APK VT++ F  C+VYLVKS D KC K
Sbjct: 215 IEGATVKLVCKSKKNITA--ETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSK 274

BLAST of CSPI01G12180 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 136.0 bits (341), Expect = 4.1e-32
Identity = 71/147 (48.30%), Postives = 90/147 (61.22%), Query Frame = 0

Query: 98  SPAHSPKPSTNIPRSFVQVQGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAV 157
           SP   P     + R  V V+G+VYCKSCKY  VDTLL A PL GATVKL+C NTK    +
Sbjct: 30  SPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQGATVKLACNNTKRGVTM 89

Query: 158 ETATSDENGYFRLAAPKNVTSYAFHRCKVYLVK----SPDSKCEKASKMNGGVDGAELKP 217
           ET T D+NGYF + APK +T+YAFH C+ +       +    C   SK+N G+ GA LKP
Sbjct: 90  ETKT-DKNGYFFMLAPKKLTTYAFHTCRAWPTNPGPTTATMTCTVPSKLNNGITGAMLKP 149

Query: 218 ARAFTDEEKKPVVLYNVGPLAFEPTCS 241
           ++     E    VL++VGP AFEP C+
Sbjct: 150 SKTINIGE-HDYVLFSVGPFAFEPACA 174

BLAST of CSPI01G12180 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 125.6 bits (314), Expect = 5.6e-29
Identity = 98/224 (43.75%), Postives = 118/224 (52.68%), Query Frame = 0

Query: 32  PAPAPTHHNAHHPVAAPTPSFHHRAHHHHHHSPSQSPTSH--HHPHSPSPAPSPVYPLHP 91
           P   P +     PV  PT        +    +P + PT      P SP   P    P++P
Sbjct: 139 PVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYP 198

Query: 92  PAHYAPVPSPAHSP-KPSTNIP-------RSFVQVQGVVYCKSCKYPDVDTLLGAKPLSG 151
           P   APV  P   P KP    P       RS V V+G VYCKSCKY   +TLLGAKP+ G
Sbjct: 199 PTK-APVKPPVSPPTKPPVTPPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEG 258

Query: 152 ATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYAFHRCKVYLVKSPDSKCEKASK 211
           ATVKL CK+ K   A    T+D+NGYF L APK VT++ F  C+VYLVKS D KC K SK
Sbjct: 259 ATVKLVCKSKKNITA--ETTTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSK 318

Query: 212 MNGGVDGAELKPARAFTDE----EKKPVVLYNVGPLAFEPTCSR 242
           + GG  GAELKP +          K    L+NVGP AF P+C +
Sbjct: 319 LFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of CSPI01G12180 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 101.7 bits (252), Expect = 8.6e-22
Identity = 91/249 (36.55%), Postives = 126/249 (50.60%), Query Frame = 0

Query: 1   MASLTANASFLLLLLCCTLLNAFQAAAY---SSTPAPAPTHHNAHHPVAAPTPSFHHRAH 60
           M  +  + S  L  L C   + F        SS P  +   H    P+  PT        
Sbjct: 1   MGIIGKSVSLTLFALLCFTSSVFTLGVNQPGSSDPFHSLPQHLPLPPIKLPTLPPAKAPI 60

Query: 61  HHHHHSPSQSPTSHHHPHSPSPAPSPV-YPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQV 120
               + P+++P     P  P PA +P+  P  PP    PV  P + PK +    ++ V V
Sbjct: 61  KLPAYPPAKAPIK--LPTLP-PAKAPIKLPTLPPIK-PPVLPPVYPPKYN----KTLVAV 120

Query: 121 QGVVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNV 180
           +GVVYCK+CKY  V+ + GAKP+  A V+L CKN K   ++    +D+NGYF L APK V
Sbjct: 121 RGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKTV 180

Query: 181 TSYAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPAR----AFTDEEKKPVVLYNVGP 240
           T+Y    C+ +LVKSPD+KC K S ++ G  G+ LKP      + T        +YNVGP
Sbjct: 181 TNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGP 239

Query: 241 LAFEPTCSR 242
            AFEPTC +
Sbjct: 241 FAFEPTCPK 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FZA27.9e-2843.75Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
P930131.2e-2036.55Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
Q032114.8e-1736.36Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LXF02.0e-13099.17Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 P... [more]
A0A5A7URZ51.4e-11589.34Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B5Q31.4e-11589.34non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459... [more]
A0A6J1EHN27.0e-8875.10non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1KM211.2e-8272.92non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
Match NameE-valueIdentityDescription
XP_004146606.24.0e-13099.17non-classical arabinogalactan protein 31 [Cucumis sativus] >KGN64686.1 hypotheti... [more]
XP_008442660.12.8e-11589.34PREDICTED: non-classical arabinogalactan protein 31 [Cucumis melo] >KAA0056996.1... [more]
XP_038876988.18.5e-10483.27non-classical arabinogalactan protein 31 [Benincasa hispida][more]
KAG7019613.16.5e-8875.52Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp.... [more]
XP_022927607.11.4e-8775.10non-classical arabinogalactan protein 31-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G28290.21.9e-3237.98arabinogalactan protein 31 [more]
AT2G34700.14.1e-3248.30Pollen Ole e 1 allergen and extensin family protein [more]
AT1G28290.15.6e-2943.75arabinogalactan protein 31 [more]
AT2G33790.18.6e-2236.55arabinogalactan protein 30 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003882Pistil-specific extensin-like proteinPRINTSPR01218PSTLEXTENSINcoord: 64..87
score: 27.08
coord: 125..149
score: 52.0
coord: 226..241
score: 33.33
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_1coord: 116..208
e-value: 3.5E-25
score: 88.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..109
NoneNo IPR availablePANTHERPTHR33470:SF22POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 10..239
NoneNo IPR availablePANTHERPTHR33470OS01G0164075 PROTEINcoord: 10..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G12180.1CSPI01G12180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071944 cell periphery