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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGGAGGAGGAAGAGGAGGAGGAAGAGAAAGCCCGCAAATCGCTAGAGATGAATGGGTGTTATTGCTTGAGCACTAATTTTGCGTATCTCTCTCTGTGTGTTGGATTCAACTCCAGGCCAGCCGGGACTTTTCCCCCTTTTCCTTCTCTTCTTCTCACTGCCCTCTCTCTCTCTCGCTCGCTCGCTCCCTCGCTCGCGGACCAGAACAAACACACCATCACCTTCCTTCTTTTCGTGCGTTCGCCGCCTCCTAAACACACTTTTGGACCCTCCCATAATAAACCTCGGCCCAATAAGAATCCCCTACTCCTCAATTCTTTTCTTAGGCCCAAGCCCAAGACGAACTAA mRNA sequence ATGAAGGAGGAGGAAGAGGAGGAGGAAGAGAAAGCCCGCAAATCGCTAGAGATGAATGGGTGTTATTGCTTGAGCACTAATTTTGCGTATCTCTCTCTGTGTGTTGGATTCAACTCCAGGCCAGCCGGGACTTTTCCCCCTTTTCCTTCTCTTCTTCTCACTGCCCTCTCTCTCTCTCGCTCGCTCGCTCCCTCGCTCGCGGACCAGAACAAACACACCATCACCTTCCTTCTTTTCGTGCGTTCGCCGCCTCCTAAACACACTTTTGGACCCTCCCATAATAAACCTCGGCCCAATAAGAATCCCCTACTCCTCAATTCTTTTCTTAGGCCCAAGCCCAAGACGAACTAA Coding sequence (CDS) ATGAAGGAGGAGGAAGAGGAGGAGGAAGAGAAAGCCCGCAAATCGCTAGAGATGAATGGGTGTTATTGCTTGAGCACTAATTTTGCGTATCTCTCTCTGTGTGTTGGATTCAACTCCAGGCCAGCCGGGACTTTTCCCCCTTTTCCTTCTCTTCTTCTCACTGCCCTCTCTCTCTCTCGCTCGCTCGCTCCCTCGCTCGCGGACCAGAACAAACACACCATCACCTTCCTTCTTTTCGTGCGTTCGCCGCCTCCTAAACACACTTTTGGACCCTCCCATAATAAACCTCGGCCCAATAAGAATCCCCTACTCCTCAATTCTTTTCTTAGGCCCAAGCCCAAGACGAACTAA Protein sequence MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSRSLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN*
Homology
BLAST of CSPI01G11300 vs. ExPASy TrEMBL
Match: A0A0A0LRQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066540 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query: 1 MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR 60
MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR
Sbjct: 1 MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR 60
Query: 61 SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN 117
SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN
Sbjct: 61 SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN 116
BLAST of CSPI01G11300 vs. NCBI nr
Match: KGN64585.1 (hypothetical protein Csa_014372 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 4.4e-58 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query: 1 MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR 60
MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR
Sbjct: 1 MKEEEEEEEEKARKSLEMNGCYCLSTNFAYLSLCVGFNSRPAGTFPPFPSLLLTALSLSR 60
Query: 61 SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN 117
SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN
Sbjct: 61 SLAPSLADQNKHTITFLLFVRSPPPKHTFGPSHNKPRPNKNPLLLNSFLRPKPKTN 116
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0LRQ4 | 2.1e-58 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066540 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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| KGN64585.1 | 4.4e-58 | 100.00 | hypothetical protein Csa_014372 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 83..116 |
Relationships
The following mRNA feature(s) are a part of this gene:
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