CSPI01G09590 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G09590
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 6002697 .. 6003077 (-)
RNA-Seq ExpressionCSPI01G09590
SyntenyCSPI01G09590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAGTTCTTCAACGGAGTACTAGACGAAAATGCCGTATATCTTGAAAACTTTTCAAGCGAGTCTGATGTTTTTCTAATATTCCAATAACTTTGCAGATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

mRNA sequence

ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

Coding sequence (CDS)

ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

Protein sequence

MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGKTRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG*
Homology
[Close]
BLAST of CSPI01G09590 vs. ExPASy TrEMBL
Match: A0A0A0LWP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050550 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60
          MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK
Sbjct: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60

Query: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 96
          TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG
Sbjct: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 95

[Close]
BLAST of CSPI01G09590 vs. ExPASy TrEMBL
Match: A0A5D3BHN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004740 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.1e-11
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 48 MFERFLLLVNMGKTRRNESSCALLSMIMPYQELFLPMIL 87
          MFERFLLLVNMGKTRRNESSCALLS+IMPYQEL LPMIL
Sbjct: 6  MFERFLLLVNMGKTRRNESSCALLSVIMPYQELLLPMIL 44

[Close]
BLAST of CSPI01G09590 vs. NCBI nr
Match: KGN64416.1 (hypothetical protein Csa_013683 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 3.8e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60
          MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK
Sbjct: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60

Query: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 96
          TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG
Sbjct: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 95

[Close]
BLAST of CSPI01G09590 vs. NCBI nr
Match: TYJ99262.1 (hypothetical protein E5676_scaffold248G004740 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 48 MFERFLLLVNMGKTRRNESSCALLSMIMPYQELFLPMIL 87
          MFERFLLLVNMGKTRRNESSCALLS+IMPYQEL LPMIL
Sbjct: 6  MFERFLLLVNMGKTRRNESSCALLSVIMPYQELLLPMIL 44

The following BLAST results are available for this feature:
BLAST of CSPI01G09590 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G09590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWP71.8e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050550 PE=4 SV=1[more]
A0A5D3BHN96.1e-1194.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI01G09590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64416.13.8e-47100.00hypothetical protein Csa_013683 [Cucumis sativus][more]
TYJ99262.11.3e-1094.87hypothetical protein E5676_scaffold248G004740 [Cucumis melo var. makuwa][more]
BLAST of CSPI01G09590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G09590.1CSPI01G09590.1mRNA