CSPI01G09530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G09530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein At1g67340
Location	Chr1: 5968998 .. 5970640 (-)
RNA-Seq Expression	CSPI01G09530
Synteny	CSPI01G09530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGAACAGAAACCAGGGACCCACCCAAATCTGTCTCGACTCTTCCCAGCCGTTGCTGAATGGCTTAGAGATATAAATTCAACGTACTCGATTCGTTTTGCCGTCACTACATCCAATTCTCAATTCTGGCGTTATTTCATCCTCCATTAACGCACCTCCATTTTTGCTCTCCTCCCATGGCGCTTTCTTTTTCAACGTGAACGTCACTACATCCAATTCTCAATTTCGGAATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTTTGGACCTCGTCAATGTTATGATAACGTAAGAATTGCTTTCCGTGTGATTCGCCTAATTTGTCGAGTTTGTTGTAATTTTCTGTTTAATTTGTTTTGTTGGCTTATTGTAGATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGGTTCGTGTAATTGGTTGAGTTTTTCTCTCTTCAATTTTAACCTGATTTTATTTTTAATGTTAAATCTGTTTTGTTTCTTTTTTTCAGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGATGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAGGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAAGCTTAGGTCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTTATTTTCTCGTCTTTTTTTAACATGTAGATGAGGTTTTTGTCTACAACTTTTTCTTTTCTTTTCTTTTTAAATTTTAGAGGGAAAACTACCTAAATTTTG

mRNA sequence

GACTGAACAGAAACCAGGGACCCACCCAAATCTGTCTCGACTCTTCCCAGCCGTTGCTGAATGGCTTAGAGATATAAATTCAACGTACTCGATTCGTTTTGCCGTCACTACATCCAATTCTCAATTCTGGCGTTATTTCATCCTCCATTAACGCACCTCCATTTTTGCTCTCCTCCCATGGCGCTTTCTTTTTCAACGTGAACGTCACTACATCCAATTCTCAATTTCGGAATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTTTGGACCTCGTCAATGTTATGATAACATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGATGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAGGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAAGCTTAGGTCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTTATTTTCTCGTCTTTTTTTAACATGTAGATGAGGTTTTTGTCTACAACTTTTTCTTTTCTTTTCTTTTTAAATTTTAGAGGGAAAACTACCTAAATTTTG

Coding sequence (CDS)

ATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTTTGGACCTCGTCAATGTTATGATAACATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGATGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAGGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAA

Protein sequence

MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE*

Homology

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BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.7e-122
Identity = 213/322 (66.15%), Postives = 251/322 (77.95%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQNVSEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASGRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA   G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEEDELEGD 331
           RHK +CAP  RWL E D  EG+
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGN 362

[Close]

BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.8e-116
Identity = 203/339 (59.88%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 4   NKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSP D + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++VSEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIE 341
           QALDW+ +HK EC P D W+    E+ GDD   V   I+
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAVAVEID 330

[Close]

BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04
Identity = 28/95 (29.47%), Postives = 43/95 (45.26%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECA------- 322
           +  G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA       
Sbjct: 128 LKSGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTDNLDN 187

Query: 323 --PFDRWLIEEDELEGDDDGGVVNRIEQFDDGENV 349
             P   +L  E E+  + +  ++  + + DD   +
Sbjct: 188 IVPDHNFLFPEFEIVIETEDEIMPEVVERDDESEI 215

[Close]

BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 315
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot
Match: Q16342 (Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 6.8e-04
Identity = 23/56 (41.07%), Postives = 27/56 (48.21%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           +  G  LC   GC  P+T       CS C    YCS+  Q LDW+L HK  CA  D
Sbjct: 128 LKSGAHLCRVCGCLGPKT-------CSRCHKAYYCSKEHQTLDWRLGHKQACAQPD 176

[Close]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 8.6e-204
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 7.8e-197
Identity = 341/351 (97.15%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE++ELEGD+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 7.8e-197
Identity = 341/351 (97.15%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE++ELEGD+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL
Match: A0A6J1EA77 (F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 317/351 (90.31%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVLGKLSA ASSP D+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   +  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ +DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL
Match: A0A6J1KQ99 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.7e-180
Identity = 315/351 (89.74%), Postives = 322/351 (91.74%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFD LPDDLVVVVLGKLSA ASSP D+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSES+HRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLGDGEDVESE 350

[Close]

BLAST of CSPI01G09530 vs. NCBI nr
Match: XP_004154118.1 (F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_013400 [Cucumis sativus])

HSP 1 Score: 719.2 bits (1855), Expect = 1.8e-203
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of CSPI01G09530 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [Cucumis melo var. makuwa] >TYJ99256.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 696.0 bits (1795), Expect = 1.6e-196
Identity = 341/351 (97.15%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE++ELEGD+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of CSPI01G09530 vs. NCBI nr
Match: XP_038894785.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 665.2 bits (1715), Expect = 3.1e-187
Identity = 328/351 (93.45%), Postives = 334/351 (95.16%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAA GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANAREL  ITNSSLRRLHCS    SA DSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDD+G  VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGD-VNRIEQFGDGENVESE 350

[Close]

BLAST of CSPI01G09530 vs. NCBI nr
Match: KAG6584151.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 646.0 bits (1665), Expect = 1.9e-181
Identity = 318/351 (90.60%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVLGKLSA ASSP D+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ +DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of CSPI01G09530 vs. NCBI nr
Match: XP_022923648.1 (F-box protein At5g50450-like [Cucurbita moschata])

HSP 1 Score: 644.4 bits (1661), Expect = 5.6e-181
Identity = 317/351 (90.31%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVLGKLSA ASSP D+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   +  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ +DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of CSPI01G09530 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 439.9 bits (1130), Expect = 1.9e-123
Identity = 213/322 (66.15%), Postives = 251/322 (77.95%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQNVSEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASGRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA   G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEEDELEGD 331
           RHK +CAP  RWL E D  EG+
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGN 362

[Close]

BLAST of CSPI01G09530 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 419.5 bits (1077), Expect = 2.7e-117
Identity = 203/339 (59.88%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 4   NKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSP D + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++VSEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIE 341
           QALDW+ +HK EC P D W+    E+ GDD   V   I+
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAVAVEID 330

[Close]

BLAST of CSPI01G09530 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF 318
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGF 104

[Close]

BLAST of CSPI01G09530 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CSPI01G09530 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of CSPI01G09530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	2.7e-122	66.15	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	3.8e-116	59.88	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	1.8e-04	29.47	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q09415	3.0e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
Q16342	6.8e-04	41.07	Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2	[more]

BLAST of CSPI01G09530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV0	8.6e-204	100.00	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A5A7UP50	7.8e-197	97.15	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	7.8e-197	97.15	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A6J1EA77	2.7e-181	90.31	F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 ...	[more]
A0A6J1KQ99	8.7e-180	89.74	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV...	[more]

BLAST of CSPI01G09530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154118.1	1.8e-203	100.00	F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_0...	[more]
XP_008439699.1	1.6e-196	97.15	PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [C...	[more]
XP_038894785.1	3.1e-187	93.45	F-box protein At1g67340 [Benincasa hispida]	[more]
KAG6584151.1	1.9e-181	90.60	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923648.1	5.6e-181	90.31	F-box protein At5g50450-like [Cucurbita moschata]	[more]

BLAST of CSPI01G09530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	1.9e-123	66.15	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	2.7e-117	59.88	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	6.3e-05	44.44	ubiquitin-specific protease 19	[more]
AT1G17110.1	1.1e-04	50.00	ubiquitin-specific protease 15	[more]
AT1G17110.2	1.1e-04	50.00	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 274..314 e-value: 2.9E-8 score: 33.7
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 272..314 score: 11.205131
None	No IPR available	GENE3D	6.10.140.2220		coord: 262..317 e-value: 4.0E-11 score: 44.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..351
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..343
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 86..200
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 270..319
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 73..223 e-value: 2.6E-16 score: 62.0
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..343
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G09530.1	CSPI01G09530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding