CSPI01G09290 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G09290
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr1: 5817780 .. 5818405 (-)
RNA-Seq Expression	CSPI01G09290
Synteny	CSPI01G09290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAAATTCCCATCTTTCCATCCTTTCCTTAAAAACATCTTTGCTTAGCTTCCTAATTCATTTTTTTTAAAAAAATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAATTTTTAGCCACGGACCCGTCATTCGAGATTTATGGAGGAGGGATTAGCTGTTGTTCTCTTGACACCGGTCGTCGGAGGCCACTTCCGGTAGCTAATTATGAGTACATAAATATTAATGGTCGTCGTAGTTTTTCTCTGATTTAGAAGTGATTATTAGATCGATAAGATATATATATTCTTTATTTCTATTTTTATTTTCCCTTAATTAGTTTTTTCTTTTTCGCGTTATTAATTTTGCACTTTTTGAAAATTATTTCTTAGTATAAATATATTTTGTTTTCTGTTTAATATTTATTTTGTTGCATCTTTTATATATAAAGAGATGGCTTTTGTTT

mRNA sequence

AATCAAATTCCCATCTTTCCATCCTTTCCTTAAAAACATCTTTGCTTAGCTTCCTAATTCATTTTTTTTAAAAAAATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAATTTTTAGCCACGGACCCGTCATTCGAGATTTATGGAGGAGGGATTAGCTGTTGTTCTCTTGACACCGGTCGTCGGAGGCCACTTCCGGTAGCTAATTATGAGTACATAAATATTAATGGTCGTCGTAGTTTTTCTCTGATTTAGAAGTGATTATTAGATCGATAAGATATATATATTCTTTATTTCTATTTTTATTTTCCCTTAATTAGTTTTTTCTTTTTCGCGTTATTAATTTTGCACTTTTTGAAAATTATTTCTTAGTATAAATATATTTTGTTTTCTGTTTAATATTTATTTTGTTGCATCTTTTATATATAAAGAGATGGCTTTTGTTT

Coding sequence (CDS)

ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAA

Protein sequence

MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSAMLLLACIAFAS*

Homology

[Close]

BLAST of CSPI01G09290 vs. ExPASy TrEMBL
Match: A0A0A0LTS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-28
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFAS 72
          MLLLACIAFAS
Sbjct: 61 MLLLACIAFAS 71

[Close]

BLAST of CSPI01G09290 vs. ExPASy TrEMBL
Match: A0A7J0FYN8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.1e-10
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++++ QQ    Q            KQ+QCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ-----------QKQMQCNKGKASKFKRSSSNLEEDGASSA 59

Query: 61 MLLLACIAFA 71
          +LLLACIAFA
Sbjct: 61 ILLLACIAFA 59

[Close]

BLAST of CSPI01G09290 vs. ExPASy TrEMBL
Match: A0A061FZA4 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014581 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R+ Q                  KQIQCNK K PKFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIA 69
          +LLLACIA
Sbjct: 61 ILLLACIA 68

[Close]

BLAST of CSPI01G09290 vs. ExPASy TrEMBL
Match: A0A6J5V3H1 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS33415 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R+ QQ    Q            KQIQCNK+K  KFKRS+SNVEEDGAS+A
Sbjct: 1  MVSKVEEAMKRRQQQQEQKQQYHHQQQQQQQQKQIQCNKSKVCKFKRSTSNVEEDGASTA 60

Query: 61 MLLLACIAFA 71
          +LLLACI  A
Sbjct: 61 ILLLACIVCA 70

[Close]

BLAST of CSPI01G09290 vs. ExPASy TrEMBL
Match: A0A4D6KYW9 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-09
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++RK Q     Q     V      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRKKQMQQEGQNQQQQV-----QKQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA A
Sbjct: 61 ILFLACIACA 65

[Close]

BLAST of CSPI01G09290 vs. NCBI nr
Match: KGN64384.1 (hypothetical protein Csa_013100 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFAS 72
          MLLLACIAFAS
Sbjct: 61 MLLLACIAFAS 71

[Close]

BLAST of CSPI01G09290 vs. NCBI nr
Match: KAG6584135.1 (hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019725.1 hypothetical protein SDJN02_18688, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20
Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEETLR K+QQV PPQ    A  AAATAKQIQCNKAKYPKFKRS SNVEEDGASSA
Sbjct: 1  MVSKVEETLRMKHQQVQPPQ----AAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSA 60

Query: 61 MLLLACIAFA 71
          MLLLACIAFA
Sbjct: 61 MLLLACIAFA 66

[Close]

BLAST of CSPI01G09290 vs. NCBI nr
Match: KAG7012298.1 (hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14
Identity = 51/70 (72.86%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE LRRK QQV  P       AA A AKQIQ NKAKYPKFKRSSS+V +DGASSA
Sbjct: 1  MVSKVEEALRRKQQQVQTPH-----AAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSA 60

Query: 61 MLLLACIAFA 71
          +LLLACIAF+
Sbjct: 61 ILLLACIAFS 65

[Close]

BLAST of CSPI01G09290 vs. NCBI nr
Match: GFZ03822.1 (hypothetical protein Acr_16g0004460 [Actinidia rufa])

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++++ QQ    Q            KQ+QCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ-----------QKQMQCNKGKASKFKRSSSNLEEDGASSA 59

Query: 61 MLLLACIAFA 71
          +LLLACIAFA
Sbjct: 61 ILLLACIAFA 59

[Close]

BLAST of CSPI01G09290 vs. NCBI nr
Match: XP_007037902.1 (PREDICTED: uncharacterized protein LOC18605055 [Theobroma cacao] >EOY22403.1 Uncharacterized protein TCM_014581 [Theobroma cacao])

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R+ Q                  KQIQCNK K PKFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIA 69
          +LLLACIA
Sbjct: 61 ILLLACIA 68

[Close]

BLAST of CSPI01G09290 vs. TAIR 10
Match: AT5G50335.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 4.4e-06
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 37 CNKAKYPKFKRSSSNVEEDGASSAMLLLACIAFAS 72
          CNK K  +FKRS+SN++ DGASSA+ LLACIA +S
Sbjct: 35 CNKEKSCRFKRSTSNLDNDGASSAIFLLACIACSS 69

The following BLAST results are available for this feature:

BLAST of CSPI01G09290 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G09290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTS0	1.9e-28	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1	[more]
A0A7J0FYN8	5.1e-10	60.00	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1	[more]
A0A061FZA4	1.5e-09	60.29	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014581 PE=4 SV=1	[more]
A0A6J5V3H1	2.5e-09	58.57	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS33415 PE=4 S...	[more]
A0A4D6KYW9	3.3e-09	61.43	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1	[more]

BLAST of CSPI01G09290 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64384.1	3.8e-28	100.00	hypothetical protein Csa_013100 [Cucumis sativus]	[more]
KAG6584135.1	2.9e-20	85.71	hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7012298.1	2.4e-14	72.86	hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyro...	[more]
GFZ03822.1	1.1e-09	60.00	hypothetical protein Acr_16g0004460 [Actinidia rufa]	[more]
XP_007037902.1	3.1e-09	60.29	PREDICTED: uncharacterized protein LOC18605055 [Theobroma cacao] >EOY22403.1 Unc...	[more]

BLAST of CSPI01G09290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50335.1	4.4e-06	65.71	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38398:SF1	EXPRESSED PROTEIN	coord: 1..71
None	No IPR available	PANTHER	PTHR38398	EXPRESSED PROTEIN	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G09290.1	CSPI01G09290.1	mRNA