CSPI01G08140 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G08140
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 5129296 .. 5130206 (+)
RNA-Seq ExpressionCSPI01G08140
SyntenyCSPI01G08140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTTCAGCAAGTGAGAAAGGGATCTATCCACTTGCAAAAGAAATTAAAGTCCCAAAATTATTCTTTGAAATTTTGAATTATGGAATCTCCCTTCAATCTTCTAATCAAATTATGTCACTAATCTCTCTCTCTCTTTCAAAGCAAAGAACCTCAACAAACACAGCTTATAAACATTATAAATCCAACTCAATTTCCTCTATGTTTCTTCATTCCATCCTTTTTTTTTTCTTCTTTTGCAATTGAATAAACAAAAATTCAACCAATCAATCAATTACCAAAGCTATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAGCTAGCTATAGCTTCTTTCCTCTCTATCTTTGAATTTTATCACTTTTTAAAAAAAAATTACGCAAGTGATGGTTCATTACTATGTGTTCATCTTCAAGTTCCACCATTTTAGGGTTTGGGATCCCATTTTTAATCTCTCA

mRNA sequence

GTCTTCAGCAAGTGAGAAAGGGATCTATCCACTTGCAAAAGAAATTAAAGTCCCAAAATTATTCTTTGAAATTTTGAATTATGGAATCTCCCTTCAATCTTCTAATCAAATTATGTCACTAATCTCTCTCTCTCTTTCAAAGCAAAGAACCTCAACAAACACAGCTTATAAACATTATAAATCCAACTCAATTTCCTCTATGTTTCTTCATTCCATCCTTTTTTTTTTCTTCTTTTGCAATTGAATAAACAAAAATTCAACCAATCAATCAATTACCAAAGCTATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAGCTAGCTATAGCTTCTTTCCTCTCTATCTTTGAATTTTATCACTTTTTAAAAAAAAATTACGCAAGTGATGGTTCATTACTATGTGTTCATCTTCAAGTTCCACCATTTTAGGGTTTGGGATCCCATTTTTAATCTCTCA

Coding sequence (CDS)

ATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAG

Protein sequence

MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATPLIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN*
Homology
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match: A0A0A0LTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.1e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP
Sbjct: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
           LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120

Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
           GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162

BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match: A0A5D3BLA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003300 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.9e-74
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MI KESRSTESLCEKSMLLVANLIKLSSSISFA+TANNE TAG S TTRRRSGGNPAATP
Sbjct: 1   MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAG-SPTTRRRSGGNPAATP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
           LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYS+SSSSSVIYEESDFDE NVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVD 120

Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
           GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161

BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match: A0A6J1GS37 (uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC111456949 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAG S    R+S GNPA TP
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAG-SRAAGRQSRGNPATTP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSS----SSSSSVIYEESDFDE 120
           LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYSS    S SS +I EESDF E
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSLPSPSSYLIREESDFVE 120

Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
            NVDGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 159

BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match: A0A6J1JZU4 (uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.1e-51
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MI KE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS     R+S GNPA TP
Sbjct: 1   MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPAKTP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS-VIYEESDFDEGNV 120
           LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYSS S SS +I EESDF E NV
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSPSSYLIREESDFIEANV 120

Query: 121 DGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
           DGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 DGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 156

BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match: A0A6J1KL49 (uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 125/167 (74.85%), Postives = 139/167 (83.23%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKE RS+ESLCEKSMLL+ANLIKLSSSISFA TA NE TAG+S  TR+RSGGN AATP
Sbjct: 1   MIGKEGRSSESLCEKSMLLLANLIKLSSSISFANTA-NEATAGTS-ATRQRSGGNSAATP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHG----SPSPRYSSSSSSSVIYEESDFDE 120
           LIPGS+RLQEPQSRAKPIYVTKPGG GFQI HG    SPS   SSSSSS+VI+ ESD DE
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGDGFQISHGSPRYSPSSSSSSSSSSNVIHGESDCDE 120

Query: 121 GNVDGWASEYIEKVHKNRKDFEQ-STMKKPKSMAKSRFRRTNSSVLN 163
            NVDGWA +YIE+VH+NRKDF+Q  T +KP SM K+R RR  +SVLN
Sbjct: 121 ANVDGWAYKYIERVHRNRKDFDQYPTNEKPYSMGKNRHRRV-TSVLN 164

BLAST of CSPI01G08140 vs. NCBI nr
Match: KGN64274.1 (hypothetical protein Csa_013446 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP
Sbjct: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
           LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120

Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
           GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162

BLAST of CSPI01G08140 vs. NCBI nr
Match: TYJ99125.1 (hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 8.0e-74
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MI KESRSTESLCEKSMLLVANLIKLSSSISFA+TANNE TAG S TTRRRSGGNPAATP
Sbjct: 1   MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAG-SPTTRRRSGGNPAATP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
           LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYS+SSSSSVIYEESDFDE NVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVD 120

Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
           GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161

BLAST of CSPI01G08140 vs. NCBI nr
Match: XP_022954798.1 (uncharacterized protein LOC111456949 [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAG S    R+S GNPA TP
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAG-SRAAGRQSRGNPATTP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSS----SSSSSVIYEESDFDE 120
           LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYSS    S SS +I EESDF E
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSLPSPSSYLIREESDFVE 120

Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
            NVDGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 159

BLAST of CSPI01G08140 vs. NCBI nr
Match: XP_022994676.1 (uncharacterized protein LOC111490318 [Cucurbita maxima])

HSP 1 Score: 211.8 bits (538), Expect = 4.3e-51
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MI KE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS     R+S GNPA TP
Sbjct: 1   MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPAKTP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS-VIYEESDFDEGNV 120
           LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYSS S SS +I EESDF E NV
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSPSSYLIREESDFIEANV 120

Query: 121 DGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
           DGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 DGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 156

BLAST of CSPI01G08140 vs. NCBI nr
Match: XP_023541667.1 (uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 5.6e-51
Identity = 124/163 (76.07%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
           MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS     R+S GNPA TP
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPATTP 60

Query: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS----VIYEESDFDE 120
           LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYSS SS S    +I EESDF E
Sbjct: 61  LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSSPSPSSYLIREESDFIE 120

Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
            NVDGWASEYIEKVHKNRK+ ++ST KKP  +A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSA 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LTD38.1e-80100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1[more]
A0A5D3BLA23.9e-7495.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1GS371.2e-5176.69uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC1114569... [more]
A0A6J1JZU42.1e-5177.50uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318... [more]
A0A6J1KL492.3e-5074.85uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176... [more]
Match NameE-valueIdentityDescription
KGN64274.11.7e-79100.00hypothetical protein Csa_013446 [Cucumis sativus][more]
TYJ99125.18.0e-7495.68hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa][more]
XP_022954798.12.5e-5176.69uncharacterized protein LOC111456949 [Cucurbita moschata][more]
XP_022994676.14.3e-5177.50uncharacterized protein LOC111490318 [Cucurbita maxima][more]
XP_023541667.15.6e-5176.07uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G08140.1CSPI01G08140.1mRNA