Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTTCAGCAAGTGAGAAAGGGATCTATCCACTTGCAAAAGAAATTAAAGTCCCAAAATTATTCTTTGAAATTTTGAATTATGGAATCTCCCTTCAATCTTCTAATCAAATTATGTCACTAATCTCTCTCTCTCTTTCAAAGCAAAGAACCTCAACAAACACAGCTTATAAACATTATAAATCCAACTCAATTTCCTCTATGTTTCTTCATTCCATCCTTTTTTTTTTCTTCTTTTGCAATTGAATAAACAAAAATTCAACCAATCAATCAATTACCAAAGCTATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAGCTAGCTATAGCTTCTTTCCTCTCTATCTTTGAATTTTATCACTTTTTAAAAAAAAATTACGCAAGTGATGGTTCATTACTATGTGTTCATCTTCAAGTTCCACCATTTTAGGGTTTGGGATCCCATTTTTAATCTCTCA
mRNA sequence
GTCTTCAGCAAGTGAGAAAGGGATCTATCCACTTGCAAAAGAAATTAAAGTCCCAAAATTATTCTTTGAAATTTTGAATTATGGAATCTCCCTTCAATCTTCTAATCAAATTATGTCACTAATCTCTCTCTCTCTTTCAAAGCAAAGAACCTCAACAAACACAGCTTATAAACATTATAAATCCAACTCAATTTCCTCTATGTTTCTTCATTCCATCCTTTTTTTTTTCTTCTTTTGCAATTGAATAAACAAAAATTCAACCAATCAATCAATTACCAAAGCTATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAGCTAGCTATAGCTTCTTTCCTCTCTATCTTTGAATTTTATCACTTTTTAAAAAAAAATTACGCAAGTGATGGTTCATTACTATGTGTTCATCTTCAAGTTCCACCATTTTAGGGTTTGGGATCCCATTTTTAATCTCTCA
Coding sequence (CDS)
ATGATCGGTAAAGAATCAAGATCCACGGAATCGCTATGTGAGAAGTCCATGTTGTTGGTAGCGAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCTAGGACGGCGAATAATGAACCAACCGCTGGATCATCTACGACCACGCGACGGCGATCGGGAGGAAATCCAGCGGCGACGCCTCTAATTCCGGGAAGTAAACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATATACGTAACGAAGCCGGGCGGAGGTGGCTTCCAAATCGGACATGGATCGCCGTCGCCGAGGTATTCATCGTCGTCTTCTTCTTCTGTGATTTATGAAGAGAGTGATTTTGATGAGGGGAATGTGGATGGTTGGGCGTCTGAGTATATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACGATGAAGAAGCCAAAATCAATGGCTAAAAGTCGATTTCGTAGAACCAATTCCTCTGTTCTAAATTAG
Protein sequence
MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATPLIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN*
Homology
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match:
A0A0A0LTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1)
HSP 1 Score: 306.2 bits (783), Expect = 8.1e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP
Sbjct: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD
Sbjct: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match:
A0A5D3BLA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003300 PE=4 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 3.9e-74
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MI KESRSTESLCEKSMLLVANLIKLSSSISFA+TANNE TAG S TTRRRSGGNPAATP
Sbjct: 1 MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAG-SPTTRRRSGGNPAATP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYS+SSSSSVIYEESDFDE NVD
Sbjct: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVD 120
Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match:
A0A6J1GS37 (uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC111456949 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAG S R+S GNPA TP
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAG-SRAAGRQSRGNPATTP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSS----SSSSSVIYEESDFDE 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG SPRYSS S SS +I EESDF E
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSLPSPSSYLIREESDFVE 120
Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
NVDGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 159
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match:
A0A6J1JZU4 (uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 2.1e-51
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MI KE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS R+S GNPA TP
Sbjct: 1 MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPAKTP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS-VIYEESDFDEGNV 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG SPRYSS S SS +I EESDF E NV
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSPSSYLIREESDFIEANV 120
Query: 121 DGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
DGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 DGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 156
BLAST of CSPI01G08140 vs. ExPASy TrEMBL
Match:
A0A6J1KL49 (uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 125/167 (74.85%), Postives = 139/167 (83.23%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKE RS+ESLCEKSMLL+ANLIKLSSSISFA TA NE TAG+S TR+RSGGN AATP
Sbjct: 1 MIGKEGRSSESLCEKSMLLLANLIKLSSSISFANTA-NEATAGTS-ATRQRSGGNSAATP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHG----SPSPRYSSSSSSSVIYEESDFDE 120
LIPGS+RLQEPQSRAKPIYVTKPGG GFQI HG SPS SSSSSS+VI+ ESD DE
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGDGFQISHGSPRYSPSSSSSSSSSSNVIHGESDCDE 120
Query: 121 GNVDGWASEYIEKVHKNRKDFEQ-STMKKPKSMAKSRFRRTNSSVLN 163
NVDGWA +YIE+VH+NRKDF+Q T +KP SM K+R RR +SVLN
Sbjct: 121 ANVDGWAYKYIERVHRNRKDFDQYPTNEKPYSMGKNRHRRV-TSVLN 164
BLAST of CSPI01G08140 vs. NCBI nr
Match:
KGN64274.1 (hypothetical protein Csa_013446 [Cucumis sativus])
HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP
Sbjct: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD
Sbjct: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162
BLAST of CSPI01G08140 vs. NCBI nr
Match:
TYJ99125.1 (hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa])
HSP 1 Score: 287.3 bits (734), Expect = 8.0e-74
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MI KESRSTESLCEKSMLLVANLIKLSSSISFA+TANNE TAG S TTRRRSGGNPAATP
Sbjct: 1 MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAG-SPTTRRRSGGNPAATP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120
LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYS+SSSSSVIYEESDFDE NVD
Sbjct: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVD 120
Query: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 163
GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161
BLAST of CSPI01G08140 vs. NCBI nr
Match:
XP_022954798.1 (uncharacterized protein LOC111456949 [Cucurbita moschata])
HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAG S R+S GNPA TP
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAG-SRAAGRQSRGNPATTP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSS----SSSSSVIYEESDFDE 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG SPRYSS S SS +I EESDF E
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSLPSPSSYLIREESDFVE 120
Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
NVDGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 159
BLAST of CSPI01G08140 vs. NCBI nr
Match:
XP_022994676.1 (uncharacterized protein LOC111490318 [Cucurbita maxima])
HSP 1 Score: 211.8 bits (538), Expect = 4.3e-51
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MI KE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS R+S GNPA TP
Sbjct: 1 MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPAKTP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS-VIYEESDFDEGNV 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG SPRYSS S SS +I EESDF E NV
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSPSSYLIREESDFIEANV 120
Query: 121 DGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
DGWASEYIEKVHKNRK+ ++ST KKP S+A+SR RR +S+
Sbjct: 121 DGWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSA 156
BLAST of CSPI01G08140 vs. NCBI nr
Match:
XP_023541667.1 (uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 211.5 bits (537), Expect = 5.6e-51
Identity = 124/163 (76.07%), Postives = 136/163 (83.44%), Query Frame = 0
Query: 1 MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60
MIGKE RS+ESLCEKSMLLVANLIKLSSSISFA+TA NE TAGS R+S GNPA TP
Sbjct: 1 MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTA-NEVTAGSRAAV-RQSRGNPATTP 60
Query: 61 LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSS----VIYEESDFDE 120
LIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG SPRYSS SS S +I EESDF E
Sbjct: 61 LIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSSPSSPSPSSYLIREESDFIE 120
Query: 121 GNVDGWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSS 160
NVDGWASEYIEKVHKNRK+ ++ST KKP +A+SR RR +S+
Sbjct: 121 ANVDGWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSA 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LTD3 | 8.1e-80 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1 | [more] |
A0A5D3BLA2 | 3.9e-74 | 95.68 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1GS37 | 1.2e-51 | 76.69 | uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC1114569... | [more] |
A0A6J1JZU4 | 2.1e-51 | 77.50 | uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318... | [more] |
A0A6J1KL49 | 2.3e-50 | 74.85 | uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176... | [more] |
Match Name | E-value | Identity | Description | |
KGN64274.1 | 1.7e-79 | 100.00 | hypothetical protein Csa_013446 [Cucumis sativus] | [more] |
TYJ99125.1 | 8.0e-74 | 95.68 | hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa] | [more] |
XP_022954798.1 | 2.5e-51 | 76.69 | uncharacterized protein LOC111456949 [Cucurbita moschata] | [more] |
XP_022994676.1 | 4.3e-51 | 77.50 | uncharacterized protein LOC111490318 [Cucurbita maxima] | [more] |
XP_023541667.1 | 5.6e-51 | 76.07 | uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |