CSPI01G07860 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G07860
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	BHLH domain-containing protein
Location	Chr1: 4962521 .. 4962912 (+)
RNA-Seq Expression	CSPI01G07860
Synteny	CSPI01G07860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTAGATCTCGTTCAAGACAATCAAGTAGTGTAAGAATCAGTGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCCTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTGCATGTATTATCAAAATCTAAAAACTTAATGTGGTATTGAGCTTACCGCTTGAGTTTTTCTTTTTTTCTTCTGTTGAGGTTTATTGAAAGATTTTTCCTCTTCTTAATTGTGTATAGGTTTCAGCAGCAAAGGTCTTGCAAGAGACATGCAATTACATTAGAAGCTTACATAGAGAAGTGGATGATCTGAGTGAAAGACTGTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

mRNA sequence

ATGTCTGGTAGATCTCGTTCAAGACAATCAAGTAGTGTAAGAATCAGTGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCCTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTTTCAGCAGCAAAGGTCTTGCAAGAGACATGCAATTACATTAGAAGCTTACATAGAGAAGTGGATGATCTGAGTGAAAGACTGTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Coding sequence (CDS)

ATGTCTGGTAGATCTCGTTCAAGACAATCAAGTAGTGTAAGAATCAGTGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCCTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTTTCAGCAGCAAAGGTCTTGCAAGAGACATGCAATTACATTAGAAGCTTACATAGAGAAGTGGATGATCTGAGTGAAAGACTGTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Protein sequence

MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ*

Homology

[Close]

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-29
Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MSG-RSRSRQSSSV-RISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQSS   RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-27
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MSGR--SRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQS S RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 89
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-27
Identity = 69/89 (77.53%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 2  SGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHRE 61
          S RSRSRQS S RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSLH+E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-27
Identity = 69/89 (77.53%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 2  SGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHRE 61
          S RSRSRQS S RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSLH+E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-26
Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MS RSRSR SS+ RI+DEQI DLV KLQ LLPE R R +D+V +A+VLQETC+YIRSLHR
Sbjct: 1  MSSRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHR 60

Query: 61 EVDDLSERLSELLATSD--TAQAAIIRSLL 89
          EVDDLSERL+ELLA +D  TAQAA+IR LL
Sbjct: 61 EVDDLSERLAELLAAADVSTAQAAVIRGLL 90

[Close]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL
Match: A0A0A0LQQ1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.3e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL
Match: A0A6J1GU92 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.3e-38
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS+VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL
Match: A0A1S4DU40 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.5e-38
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL
Match: A0A6J1K5U5 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSG SRSRQSS+VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGISRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL
Match: A0A5D3BJ22 (Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003000 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 5  SRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD 64
          SRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD
Sbjct: 6  SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD 65

Query: 65 LSERLSELLATSDTAQAAIIRSLLTQ 91
          LSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 66 LSERLSELLATSDTAQAAIIRSLLTQ 91

[Close]

BLAST of CSPI01G07860 vs. NCBI nr
Match: XP_004152438.1 (transcription factor PRE3 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 6.8e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. NCBI nr
Match: KAG6573012.1 (putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS+VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. NCBI nr
Match: XP_022955105.1 (transcription factor PRE3-like [Cucurbita moschata])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS+VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. NCBI nr
Match: XP_023542851.1 (transcription factor PRE3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS++RISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAIRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. NCBI nr
Match: XP_016899225.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of CSPI01G07860 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 129.0 bits (323), Expect = 1.9e-30
Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MSG-RSRSRQSSSV-RISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQSS   RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CSPI01G07860 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 8.0e-29
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MSGR--SRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQS S RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 89
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CSPI01G07860 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 59/90 (65.56%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 2  SGRSRSRQSSSVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLHR 61
          S +SRSRQ+ +  I+DEQI DLV +L +LLPE+  NR S KVSA++VLQETC+YIR+L +
Sbjct: 3  SRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSK 62

Query: 62 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLS+LL ++D+AQAA+IRSLL Q
Sbjct: 63 EVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of CSPI01G07860 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 )

HSP 1 Score: 102.1 bits (253), Expect = 2.5e-22
Identity = 60/92 (65.22%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MSGRSRSRQ-SSSVRISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRSL 60
          MS   RSRQ SSS RISD+QITDL+ KL+Q +PEIR NR S+ VSA+KVLQETCNYIR+L
Sbjct: 1  MSSSRRSRQASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 89
          ++E DDLS+RL++LL + D  + QAA+IRSL+
Sbjct: 61 NKEADDLSDRLTQLLESIDPNSPQAAVIRSLI 92

[Close]

BLAST of CSPI01G07860 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.2e-22
Identity = 63/92 (68.48%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MSGRSRSRQSSSV-RISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSL 60
          MS R RSRQSSS  RISD Q+ DLV KL+Q+LPEI + R SDK SA+KVLQETCNYIR+L
Sbjct: 1  MSNR-RSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLAT--SDTAQAAIIRSLL 89
          +REVD+LSERLS+LL +   D+ +AA+IRSLL
Sbjct: 61 NREVDNLSERLSQLLESVDEDSPEAAVIRSLL 91

The following BLAST results are available for this feature:

BLAST of CSPI01G07860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	2.7e-29	80.65	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q8GW32	1.1e-27	76.09	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	4.3e-27	77.53	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	4.3e-27	77.53	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
A2Z730	4.7e-26	73.33	Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV...	[more]

BLAST of CSPI01G07860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQQ1	3.3e-38	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 S...	[more]
A0A6J1GU92	7.3e-38	98.89	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=...	[more]
A0A1S4DU40	9.5e-38	98.89	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1	[more]
A0A6J1K5U5	6.2e-37	97.78	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 ...	[more]
A0A5D3BJ22	1.5e-35	98.84	Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CSPI01G07860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152438.1	6.8e-38	100.00	transcription factor PRE3 [Cucumis sativus]	[more]
KAG6573012.1	1.5e-37	98.89	putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma s...	[more]
XP_022955105.1	1.5e-37	98.89	transcription factor PRE3-like [Cucurbita moschata]	[more]
XP_023542851.1	2.0e-37	97.78	transcription factor PRE3-like [Cucurbita pepo subsp. pepo]	[more]
XP_016899225.1	2.0e-37	98.89	PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcr...	[more]

BLAST of CSPI01G07860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	1.9e-30	80.65	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	8.0e-29	76.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	1.0e-23	65.56	BANQUO 3	[more]
AT5G15160.1	2.5e-22	65.22	BANQUO 2	[more]
AT5G39860.1	3.2e-22	68.48	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 2..88
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 17..75 e-value: 1.35442E-19 score: 73.1063
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 14..86 e-value: 2.3E-9 score: 39.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..76
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..59 e-value: 2.1E-5 score: 24.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 4..58 score: 11.11527
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G07860.1	CSPI01G07860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity