CSPI01G07440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G07440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	zinc-finger homeodomain protein 9-like
Location	Chr1: 4716135 .. 4716934 (+)
RNA-Seq Expression	CSPI01G07440
Synteny	CSPI01G07440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTATGTATACATACATGCATGTATATCTTTGTATTATGTGAGCTTGATATAATATATACACACACATACATAAAAGTGAATCACTTTTAATCAAAACTTGAGTACCCTCTCTCATTAGGGCTTGTTTGGCATCCCAAAAAAAAGCACCATATCTCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAAATTTTATTTTTCAAAGAAAAAGAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGTCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGGGGGAGGAAAAAAAGGGTCCGGACGGGGGAGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

mRNA sequence

ATGCATGTATGTATACATACATGCATGTATATCTTTGTATTATGTGAGCTTGATATAATATATACACACACATACATAAAAGTGAATCACTTTTAATCAAAACTTGAGTACCCTCTCTCATTAGGGCTTGTTTGGCATCCCAAAAAAAAGCACCATATCTCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAAATTTTATTTTTCAAAGAAAAAGAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGTCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGGGGGAGGAAAAAAAGGGTCCGGACGGGGGAGGCGGAATTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Coding sequence (CDS)

ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGTCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGGGGGAGGAAAAAAAGGGTCCGGACGGGGGAGGCGGAATTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ*

Homology

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BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 79/178 (44.38%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYDRHAVVEY-----------AAADTE-----RSGGGRKKRVR 122
            GG      T  +     +     +             A+ D E      S GG  KR R
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 165
           T   +FTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 T---KFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

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BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot
Match: A2XLF4 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-32
Identity = 84/186 (45.16%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-----VTYIAG 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK         A 
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGRSSAATATDDDL--------MDYDRHAVVEYAAAD----TERSGGGRKKRVRTGEAEF 129
           GG   A       L          Y   A +  A           G G ++R RT   +F
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRT---KF 131

Query: 130 TADQKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSS 174
           T +QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK     
Sbjct: 132 TEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGG 191

[Close]

BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot
Match: Q10DV5 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-32
Identity = 84/186 (45.16%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-----VTYIAG 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK         A 
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGRSSAATATDDDL--------MDYDRHAVVEYAAAD----TERSGGGRKKRVRTGEAEF 129
           GG   A       L          Y   A +  A           G G ++R RT   +F
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRT---KF 131

Query: 130 TADQKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSS 174
           T +QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK     
Sbjct: 132 TEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGG 191

[Close]

BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot
Match: Q9FKP8 (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  -----------------------IAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSG 122
                                  ++     S A      L    R    +     +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGRKKRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWM 169
           GG +KR RT   +FTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+
Sbjct: 188 GGIRKRHRT---KFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWL 247

[Close]

BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 82/218 (37.61%), Postives = 116/218 (53.21%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPAN--LLHCAACGCHRNFHRKVT-- 64
           N+   Y+ECL+NHAA++G +A DGCGEF    SS+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  YIAGGGRSSAATATDDDLMDYDRH------------------------------------ 124
             A    S   ++T    ++Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYAAADTERSG-GGRKKRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDL 173
                  + + +AAA    S   G +KR RT   +F+++QKEKM  FA+++GWK+Q++D 
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRT---KFSSNQKEKMHEFADRIGWKIQKRD- 226

[Close]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGG KKR RT   +FTADQKEKM
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRT---KFTADQKEKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 180
           LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 173/182 (95.05%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDLMDYDRHAVVEYAAADTERS-GGGRKKRVRTGEAEFTADQKE 120
           YIA GGGRSSAATATDDDLMDYDRHAVVEYAAADTERS GGG KKR RT   +FT DQKE
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRT---KFTVDQKE 120

Query: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 180
           KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL
Sbjct: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 179

[Close]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL
Match: A0A6J1KHP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495841 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.6e-81
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YIAGGGRSSAATA  DDLMDYD+      AA DTERSGGG KKR RT   +FTADQ+EKM
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRT---KFTADQREKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 180
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL
Match: A0A6J1EDP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111431593 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.6e-81
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YIAGGGRSSAATA  DDLMDYD+      AA DTERSGGG KKR RT   +FTADQ+EKM
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRT---KFTADQREKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 180
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL
Match: A0A6J1K6H9 (zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490534 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.9e-78
Identity = 147/179 (82.12%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YI G GR S+A  T D+LMDYDRHA+VEYAA DT    GG KKR RT   +FT DQKEKM
Sbjct: 61  YIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGSKKRFRT---KFTTDQKEKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 180
           LAFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 LAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]

BLAST of CSPI01G07440 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGG KKR RT   +FTADQKEKM
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRT---KFTADQKEKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 180
           LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of CSPI01G07440 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 6.1e-91
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERS--GGGRKKRVRTGEAEFTADQKE 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERS  GGG KKR RT   +FTADQKE
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGGSKKRFRT---KFTADQKE 120

Query: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 180
           KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL
Sbjct: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 179

[Close]

BLAST of CSPI01G07440 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 5.2e-90
Identity = 173/182 (95.05%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDLMDYDRHAVVEYAAADTERS-GGGRKKRVRTGEAEFTADQKE 120
           YIA GGGRSSAATATDDDLMDYDRHAVVEYAAADTERS GGG KKR RT   +FT DQKE
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRT---KFTVDQKE 120

Query: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 180
           KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL
Sbjct: 121 KMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSL 179

[Close]

BLAST of CSPI01G07440 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo] >KAG6584298.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019891.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 7.5e-81
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YIAGGGRSSAATA  DDLMDYD+      AA DTERSGGG KKR RT   +FTADQ+EKM
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRT---KFTADQREKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 180
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of CSPI01G07440 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 7.0e-79
Identity = 149/179 (83.24%), Postives = 161/179 (89.94%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRKKRVRTGEAEFTADQKEKM 120
           YI GGGR S+A  T D+LMDYDRHA+VEYAAADT    GG KKR RT   +FT DQKEKM
Sbjct: 61  YIGGGGRFSSAAPTADNLMDYDRHAIVEYAAADT----GGSKKRFRT---KFTTDQKEKM 120

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 180
           LAFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 LAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]

BLAST of CSPI01G07440 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 79/178 (44.38%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYDRHAVVEY-----------AAADTE-----RSGGGRKKRVR 122
            GG      T  +     +     +             A+ D E      S GG  KR R
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 165
           T   +FTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 T---KFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of CSPI01G07440 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  -----------------------IAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSG 122
                                  ++     S A      L    R    +     +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGRKKRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWM 169
           GG +KR RT   +FTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+
Sbjct: 188 GGIRKRHRT---KFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWL 247

[Close]

BLAST of CSPI01G07440 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 82/218 (37.61%), Postives = 116/218 (53.21%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPAN--LLHCAACGCHRNFHRKVT-- 64
           N+   Y+ECL+NHAA++G +A DGCGEF    SS+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  YIAGGGRSSAATATDDDLMDYDRH------------------------------------ 124
             A    S   ++T    ++Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYAAADTERSG-GGRKKRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDL 173
                  + + +AAA    S   G +KR RT   +F+++QKEKM  FA+++GWK+Q++D 
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRT---KFSSNQKEKMHEFADRIGWKIQKRD- 226

[Close]

BLAST of CSPI01G07440 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 73/182 (40.11%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF           L CAAC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ----------------VTYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGRK 129
                           +    GGG   AA ++ +DL  +  H        D +      K
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKF--HQSFSGYGVD-QFHHYQPK 201

Query: 130 KRVRTGEAEFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHK 165
           KR RT   +F  +QKEKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K
Sbjct: 202 KRFRT---KFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNK 256

[Close]

BLAST of CSPI01G07440 vs. TAIR 10
Match: AT1G75240.1 (homeobox protein 33 )

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-27
Identity = 80/227 (35.24%), Postives = 101/227 (44.49%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV---------- 69
           YRECL+NHAAS+G    DGCGEF           L CAAC CHRNFHRK           
Sbjct: 76  YRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLI 135

Query: 70  -----------TYIAGGGR----------------------------------------- 129
                       Y  GGGR                                         
Sbjct: 136 SHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGMSPPGGGGMVTP 195

Query: 130 --------SSAATATDDDLMDYDRHA--VVEYAAADTERSGGGRKKRVRTGEAEFTADQK 165
                      A ++ +DL  Y + +      AA     S    KKR RT   +FT DQK
Sbjct: 196 MSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRT---KFTTDQK 255

The following BLAST results are available for this feature:

BLAST of CSPI01G07440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB61	1.8e-32	44.38	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
A2XLF4	6.7e-32	45.16	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD...	[more]
Q10DV5	6.7e-32	45.16	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Z...	[more]
Q9FKP8	5.3e-29	38.95	Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
Q9LHF0	1.5e-28	37.61	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]

BLAST of CSPI01G07440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQK4	1.4e-93	96.67	Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430...	[more]
A0A1S3CU70	2.5e-90	95.05	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P...	[more]
A0A6J1KHP1	3.6e-81	87.22	zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A6J1EDP1	3.6e-81	87.22	zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1K6H9	4.9e-78	82.12	zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490...	[more]

BLAST of CSPI01G07440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137520.1	2.9e-93	96.67	zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro...	[more]
XP_038895089.1	6.1e-91	94.51	zinc-finger homeodomain protein 9-like [Benincasa hispida]	[more]
XP_008467173.1	5.2e-90	95.05	PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo]	[more]
XP_022924045.1	7.5e-81	87.22	zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc...	[more]
XP_023542338.1	7.0e-79	83.24	zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI01G07440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	1.3e-33	44.38	homeobox protein 22	[more]
AT5G65410.1	3.8e-30	38.95	homeobox protein 25	[more]
AT3G28920.1	1.1e-29	37.61	homeobox protein 34	[more]
AT2G18350.1	1.6e-28	40.11	homeobox protein 24	[more]
AT1G75240.1	1.0e-27	35.24	homeobox protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 8..60 e-value: 9.0E-25 score: 86.8
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 9..58 e-value: 1.4E-22 score: 77.8
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 10..59 score: 23.35898
None	No IPR available	GENE3D	1.10.10.60		coord: 88..169 e-value: 4.2E-30 score: 105.4
None	No IPR available	PANTHER	PTHR31948:SF16	ZINC-FINGER HOMEODOMAIN PROTEIN 11	coord: 5..171
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 5..171
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 103..163 e-value: 1.3E-25 score: 87.1
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 95..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G07440.1	CSPI01G07440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding