CSPI01G05290 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G05290
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pectate lyase
Location	Chr1: 3442733 .. 3444078 (+)
RNA-Seq Expression	CSPI01G05290
Synteny	CSPI01G05290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTCGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTTAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGTTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGTATAATTTATTTAAATATCATTTATGAAATTAATCAATTAATTAAAACTAAACTAACATTCCTAAGCATTTCATAATATTAATATTTTTTAGGTAACCATATGTGTAGGATTCGATATGGGTATGCACATGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGGTAACAATAATAATAGAGTTTGGATTTTATAAATAGTTCTACAATATACAGTATTGATTTTGTGCTTTTTTGTTAATGGCAGGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

mRNA sequence

ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTCGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTTAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGTTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGATTCGATATGGGTATGCACATGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

Coding sequence (CDS)

ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTCGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTTAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGTTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGATTCGATATGGGTATGCACATGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA

Protein sequence

MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC*

Homology

[Close]

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-90
Identity = 174/385 (45.19%), Postives = 235/385 (61.04%), Query Frame = 0


Query: 9   LSVLSLISFILLISTAVSYSEAHGLNM-----NAIDRCWRSNPYWRKNRQQLATCSVGFA 68
           L+++SL+ F    S+ V  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF 
Sbjct: 6   LTIISLL-FAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFG 65

Query: 69  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 128
                  G+    Y VT+PSDDP NPRPGTLRY     K  +WITF +DM IVL+  L++
Sbjct: 66  KSAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSK-PLWITFARDMVIVLRNELIM 125

Query: 129 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 188
           +S+  IDGRG+ V I    C+ +   +++IIHG+ IH CK   +G+V      V S    
Sbjct: 126 NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGS 185

Query: 189 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 248
           DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V
Sbjct: 186 DGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNV 245

Query: 249 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 308
            D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F
Sbjct: 246 EDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYF 305

Query: 309 IASKSKQVIWSTGKVEEA----KWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFP 368
           +AS        T +++      +WK+ + +D F+NGA F  +  G G V P Y   +RFP
Sbjct: 306 VASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFP 365

Query: 369 VADAKWIRALTSSSGALRCTSNSKC 385
           V+    +  LTSS+G L C S   C
Sbjct: 366 VSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-85
Identity = 174/386 (45.08%), Postives = 234/386 (60.62%), Query Frame = 0


Query: 10  SVLSLISFIL------LISTAVSYS-EAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGF 69
           S++ ++S +L      L+ TA SY+  A  +++N ID CWR NP W  NRQ LA C+VG+
Sbjct: 3   SLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY 62

Query: 70  AGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLL 129
            GK     G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM IVL+  L+
Sbjct: 63  -GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLM 122

Query: 130 VSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGN 189
           ++S+  IDGRG+ V I    CL + +  ++IIHG+ IH CK+   G              
Sbjct: 123 INSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG-------------- 182

Query: 190 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 249
           +DGD IR+  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y
Sbjct: 183 MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSY 242

Query: 250 VRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 309
           + D+ MRVT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N 
Sbjct: 243 MGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNY 302

Query: 310 FIASKSKQVIWSTGKV----EEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRF 369
           F+A + +     T ++    +  +WK+ + RD F NGA F   GV    V+P Y   + F
Sbjct: 303 FVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGF 362

Query: 370 PVADAKWIRALTSSSGALRCTSNSKC 385
            VA    + +LTSS+G LRC     C
Sbjct: 363 RVAHGSLVPSLTSSAGPLRCYVGRIC 368

[Close]

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot
Match: O65456 (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-84
Identity = 163/353 (46.18%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L+  L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK    G V      V      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK+V     K     W++ + +D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot
Match: O65457 (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.9e-84
Identity = 163/353 (46.18%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L   L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK   +G+V      V      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK+V     K     W++ +  D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot
Match: Q9LRM5 (Probable pectate lyase 9 OS=Arabidopsis thaliana OX=3702 GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.7e-83
Identity = 161/357 (45.10%), Postives = 209/357 (58.54%), Query Frame = 0


Query: 34  NMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDP-INPRPG 93
           N N ID CWR +  W KNR+ LA C +GF  K     GRN  +Y VTD SDD  +NP+PG
Sbjct: 102 NGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFG--GRNGSYYVVTDHSDDDVVNPKPG 161

Query: 94  TLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNI 153
           TLR+    ++  +WI FK+DM I L++ L+++SF  ID RG+ VHI   AC+ +   TN+
Sbjct: 162 TLRHAVIQVE-PLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNV 221

Query: 154 IIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLD 213
           I+HGL IH CK      V    ++    G  DGDAI +  +S +WIDHN+L  C DGL+D
Sbjct: 222 IVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVD 281

Query: 214 VTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGY 273
           V  GST ITISNN F   D+V+LLGH+D Y RD+ M+VTV YNHFG    QRMPR R+GY
Sbjct: 282 VVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGY 341

Query: 274 AHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKV-----EEAKWKFHS 333
            HV NN Y  W  YAIGGS NP++ S+ N F A K+      T ++     E  +W + S
Sbjct: 342 FHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRS 401

Query: 334 VRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
            +D   NGA F   G G        +     P   A  + A+T+S+GAL C     C
Sbjct: 402 EKDLLVNGAFFTPSGEGASGDSQTLS----LPAKPASMVDAITASAGALSCRRGKPC 451

[Close]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL
Match: A0A0A0LPZ1 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 5.7e-225
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60
           MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120
           GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180
           LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360
           NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWIRALTSSSGALRCTSNSKC 385
           ADAKWIRALTSSSGALRCTSNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL
Match: A0A1S3AY18 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 1.9e-212
Identity = 357/381 (93.70%), Postives = 372/381 (97.64%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLSVLSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+VTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL
Match: A0A5D3BIF3 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 PE=3 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 1.8e-199
Identity = 345/381 (90.55%), Postives = 359/381 (94.23%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLSVLSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL
Match: A0A5A7T3T4 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00520 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.4e-199
Identity = 344/381 (90.29%), Postives = 358/381 (93.96%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLS LSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSALSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL
Match: A0A6J1E7R9 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.2e-193
Identity = 322/377 (85.41%), Postives = 356/377 (94.43%), Query Frame = 0


Query: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67
           QL VLSLIS  LL  +AVSYSE +GL MNAIDRCWRSNPYWR+NRQQL  CSVGF GKMT
Sbjct: 5   QLFVLSLISLTLL--SAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 64

Query: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127
           NN+GRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDMHI+L KPLL+SS+T
Sbjct: 65  NNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 124

Query: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187
           AIDGRG++VHI+GNACL+V +ATNIIIHGLIIHHCK+Q AGQVMGPN+K++SLG+VDGDA
Sbjct: 125 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 184

Query: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247
           IRLV+ASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD++
Sbjct: 185 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 244

Query: 248 MRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307
           MRVTV+YNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK
Sbjct: 245 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 304

Query: 308 SKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIR 367
           SKQ++WSTGKVE AKWKFHSVRD FENGASF +IGVG+G VKPNY+ QQRFPVADAKW+R
Sbjct: 305 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 364

Query: 368 ALTSSSGALRCTSNSKC 385
           +LTSSSGALRC+S S+C
Sbjct: 365 SLTSSSGALRCSSKSRC 379

[Close]

BLAST of CSPI01G05290 vs. NCBI nr
Match: KGN63970.1 (hypothetical protein Csa_014255 [Cucumis sativus])

HSP 1 Score: 789.6 bits (2038), Expect = 1.2e-224
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60
           MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV
Sbjct: 1   MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSV 60

Query: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120
           GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP
Sbjct: 61  GFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKP 120

Query: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180
           LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL
Sbjct: 121 LLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISL 180

Query: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240
           GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD
Sbjct: 181 GNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDD 240

Query: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300
           GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA
Sbjct: 241 GYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEA 300

Query: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360
           NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV
Sbjct: 301 NLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPV 360

Query: 361 ADAKWIRALTSSSGALRCTSNSKC 385
           ADAKWIRALTSSSGALRCTSNSKC
Sbjct: 361 ADAKWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of CSPI01G05290 vs. NCBI nr
Match: XP_008439120.1 (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 748.0 bits (1930), Expect = 3.9e-212
Identity = 357/381 (93.70%), Postives = 372/381 (97.64%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLSVLSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+VTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of CSPI01G05290 vs. NCBI nr
Match: XP_004137574.3 (putative pectate lyase 2 [Cucumis sativus])

HSP 1 Score: 733.0 bits (1891), Expect = 1.3e-207
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL
Sbjct: 1   MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 60

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII
Sbjct: 61  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 120

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT
Sbjct: 121 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 180

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
           RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH
Sbjct: 181 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 240

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFEN 334
           VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFEN
Sbjct: 241 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFEN 300

Query: 335 GASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           GASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC
Sbjct: 301 GASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 350

[Close]

BLAST of CSPI01G05290 vs. NCBI nr
Match: TYJ98866.1 (putative pectate lyase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 704.9 bits (1818), Expect = 3.8e-199
Identity = 345/381 (90.55%), Postives = 359/381 (94.23%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLSVLSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of CSPI01G05290 vs. NCBI nr
Match: KAA0036059.1 (putative pectate lyase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 703.4 bits (1814), Expect = 1.1e-198
Identity = 344/381 (90.29%), Postives = 358/381 (93.96%), Query Frame = 0


Query: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63
           T TQQLS LSLISFI LIS  VS SEAHGL+MNAIDRCWRSNPYWR+NRQQLATCSVGFA
Sbjct: 2   TITQQLSALSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFA 61

Query: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123
           GKMTNNMGRNL+HYQVTDPSDDPINPRPGTLRYGATMIKHKVWITF+KDMHIVLQKPLL+
Sbjct: 62  GKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLI 121

Query: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183
           SSFTAIDGRG+TVHITGNACLMV+RATNIIIHGLIIHHC+SQAAG+VMGPN+KVISLG+V
Sbjct: 122 SSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHV 181

Query: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243
           DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 182 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241

Query: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303
           RDR+M+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 242 RDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301

Query: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363
           IASKSKQVIWSTG VEEAKWKFHSVRD FENGA F EIGVG+GRVKPNYNPQQRFPVADA
Sbjct: 302 IASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADA 361

Query: 364 KWIRALTSSSGALRCTSNSKC 385
           KWIRALTSSSGALRCTSNSKC
Sbjct: 362 KWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of CSPI01G05290 vs. TAIR 10
Match: AT5G09280.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-112
Identity = 182/255 (71.37%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 66  MTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSS 125
           MT N+G+ +  Y+VTDPSDDP+NP+PGTLRYGAT++K K WITFK++M I L KPLL+SS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 126 FTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDG 185
           FTA+DGRG++VHI+G ACL+V RAT++IIHGL IH CK+     VMGP++K+I LG++DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 186 DAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 245
           DAIRLVTA KVWIDHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGHDDGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 246 RSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 305
           + MRVTV++NHFGPNCNQRMPR+R+GYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 306 SK--SKQVIWSTGKV 319
            K  SK+V+   G +
Sbjct: 241 PKSGSKEVLEKHGPI 255

[Close]

BLAST of CSPI01G05290 vs. TAIR 10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 334.7 bits (857), Expect = 9.6e-92
Identity = 174/385 (45.19%), Postives = 235/385 (61.04%), Query Frame = 0


Query: 9   LSVLSLISFILLISTAVSYSEAHGLNM-----NAIDRCWRSNPYWRKNRQQLATCSVGFA 68
           L+++SL+ F    S+ V  + ++G  +     N ID CWR NPYW  NR+ LA C+VGF 
Sbjct: 6   LTIISLL-FAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFG 65

Query: 69  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 128
                  G+    Y VT+PSDDP NPRPGTLRY     K  +WITF +DM IVL+  L++
Sbjct: 66  KSAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSK-PLWITFARDMVIVLRNELIM 125

Query: 129 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 188
           +S+  IDGRG+ V I    C+ +   +++IIHG+ IH CK   +G+V      V S    
Sbjct: 126 NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGS 185

Query: 189 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 248
           DGDAI +  +S +WIDH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V
Sbjct: 186 DGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNV 245

Query: 249 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 308
            D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F
Sbjct: 246 EDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYF 305

Query: 309 IASKSKQVIWSTGKVEEA----KWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFP 368
           +AS        T +++      +WK+ + +D F+NGA F  +  G G V P Y   +RFP
Sbjct: 306 VASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFP 365

Query: 369 VADAKWIRALTSSSGALRCTSNSKC 385
           V+    +  LTSS+G L C S   C
Sbjct: 366 VSHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of CSPI01G05290 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 1.6e-86
Identity = 174/386 (45.08%), Postives = 234/386 (60.62%), Query Frame = 0


Query: 10  SVLSLISFIL------LISTAVSYS-EAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGF 69
           S++ ++S +L      L+ TA SY+  A  +++N ID CWR NP W  NRQ LA C+VG+
Sbjct: 3   SLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY 62

Query: 70  AGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLL 129
            GK     G+N   Y VT+PSD+P  P PGTLRY  +  K  +WITF +DM IVL+  L+
Sbjct: 63  -GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPK-PLWITFARDMVIVLKSQLM 122

Query: 130 VSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGN 189
           ++S+  IDGRG+ V I    CL + +  ++IIHG+ IH CK+   G              
Sbjct: 123 INSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG-------------- 182

Query: 190 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 249
           +DGD IR+  ++ VWIDH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y
Sbjct: 183 MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSY 242

Query: 250 VRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 309
           + D+ MRVT+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N 
Sbjct: 243 MGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNY 302

Query: 310 FIASKSKQVIWSTGKV----EEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRF 369
           F+A + +     T ++    +  +WK+ + RD F NGA F   GV    V+P Y   + F
Sbjct: 303 FVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGF 362

Query: 370 PVADAKWIRALTSSSGALRCTSNSKC 385
            VA    + +LTSS+G LRC     C
Sbjct: 363 RVAHGSLVPSLTSSAGPLRCYVGRIC 368

[Close]

BLAST of CSPI01G05290 vs. TAIR 10
Match: AT4G22080.1 (root hair specific 14 )

HSP 1 Score: 315.1 bits (806), Expect = 7.9e-86
Identity = 163/353 (46.18%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L+  L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK    G V      V      DGDAI +  +S +WIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK+V     K     W++ + +D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of CSPI01G05290 vs. TAIR 10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-85
Identity = 163/353 (46.18%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 35  MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL 94
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 95  RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII 154
           RYG    K  +WITF KDM I L   L+V+S+  IDGRG+ V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAK-PLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 155 HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT 214
           HG+ IH CK   +G+V      V      DGDAI +  +S VWIDH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 215 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH 274
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 275 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQVIWSTGKVEEAKWKFHSVRDA 334
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK+V     K     W++ +  D 
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 335 FENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC 385
           F+NGA F  +  G G +   Y+  QRF VA    + +LT+ +G L C  N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

The following BLAST results are available for this feature:

BLAST of CSPI01G05290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65388	1.4e-90	45.19	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
Q9C8G4	2.2e-85	45.08	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
O65456	1.1e-84	46.18	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
O65457	1.9e-84	46.18	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
Q9LRM5	2.7e-83	45.10	Probable pectate lyase 9 OS=Arabidopsis thaliana OX=3702 GN=At3g24230 PE=2 SV=1	[more]

BLAST of CSPI01G05290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ1	5.7e-225	100.00	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1	[more]
A0A1S3AY18	1.9e-212	93.70	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1	[more]
A0A5D3BIF3	1.8e-199	90.55	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 ...	[more]
A0A5A7T3T4	5.4e-199	90.29	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00520 ...	[more]
A0A6J1E7R9	1.2e-193	85.41	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1	[more]

BLAST of CSPI01G05290 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63970.1	1.2e-224	100.00	hypothetical protein Csa_014255 [Cucumis sativus]	[more]
XP_008439120.1	3.9e-212	93.70	PREDICTED: putative pectate lyase 2 [Cucumis melo]	[more]
XP_004137574.3	1.3e-207	100.00	putative pectate lyase 2 [Cucumis sativus]	[more]
TYJ98866.1	3.8e-199	90.55	putative pectate lyase 2 [Cucumis melo var. makuwa]	[more]
KAA0036059.1	1.1e-198	90.29	putative pectate lyase 2 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI01G05290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09280.1	3.8e-112	71.37	Pectin lyase-like superfamily protein	[more]
AT1G11920.1	9.6e-92	45.19	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	1.6e-86	45.08	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	7.9e-86	46.18	root hair specific 14	[more]
AT4G22090.1	1.3e-85	46.18	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 58..75 score: 22.75 coord: 286..305 score: 58.57 coord: 264..283 score: 62.62 coord: 184..205 score: 48.48 coord: 120..136 score: 47.9 coord: 355..378 score: 29.37
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 112..309 e-value: 3.5E-70 score: 249.1
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 125..303 e-value: 9.2E-25 score: 87.5
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 35..377 e-value: 9.8E-96 score: 322.7
None	No IPR available	PANTHER	PTHR31683:SF74	PECTATE LYASE	coord: 15..381
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 15..381
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 35..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G05290.1	CSPI01G05290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity