CSPI01G04610 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G04610
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Arginine decarboxylase-like
Location	Chr1: 2904885 .. 2906526 (+)
RNA-Seq Expression	CSPI01G04610
Synteny	CSPI01G04610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTAGCGCTAGGCTTTCCGTGGAGATAAGTTCTACACTGATGGTTGTGTCAGCTTTATCTTCCTCCATAAACCCTGTAAGCTCTTGCTCTTTCTTCACTCCATGTGCTATGCATTTAGCACAAATTTGTGAAGCTTGATGTTTCGTCTGCTAATGAAACTTTTAACTTTTTGTTCAGAATCATCATTATAGGTTTGGTCACAGTTGGCGTATGAGGCCCCAGAGAAGAAAGTCTTATTGTAGCATTAGTCAGGTTTGCATCTTCCCTTTTGCATTTGATTACCCTTTAGTCATCCTTGTTGAGTACAAATAATGTGGGGTAGAATTGAAAATATCTGCGTATTCCTCTTTGATCACCATGCTAAGCTGATGTTAGTGAACTAATAAAAACTGATGGTGGGTGCTTGAAACTTAAACTATGGTCCTCCAAGAAAACATTTGATTTCTCTATTCCATGAGCTGTGTTTTTAGCTGCTGTTATGAAATCACCAATCAAAGATAAATAGAAATTTTAGATCGTAGAAAATCAACACAAGGTTAAAGATAGAGAGTAAATAGAAAATTTTTTAAATCCTAGGACCACATTTGTAAATAAATAAAACAACATAAACAAGAATACAGAGATTCAAAGCATTCAAACAGTTGTCTTCATCGCTCAAGATGGACATTTATTTATTGAGAATGTCTATTCTTAGCTGAAACTTAATTTGATAGACTTTTTTCTCCTGGTGTTTCAAGTTCTTTCATTTTTCCTGCAGGAAACAAACATTGTTGAGCCAGAGAAGAATCAGAACACATCAATAGAAAAGCAAACCACCAAGAAAGCAATCAGAGAATCTCCAATATCCCAGAAAGGTTGTCCTCCTCTGGTTAATGCATTGAAAGTTTCAGCTGAGCAAAAAGCGGCTCGTTTTCACTTTCCTGGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCTCATTGGTCTGAAACCATTTATGCATGATTTACCCAAGCTACGGGAGCTGGACAACCTATTTTGTCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGGAGCATCAGAAACATGGTTCCTCGTTGGAGGAACATGTGGAATTCAGGCTGCAACTATGGCAACTTGCTCCCCAGGAGATCATATAATTTTTCCAAGGAATGCCCATGTATCCGTCATATCAGCTTTGGTGTTATCTGGTGCAATACCGAAATACATTATGCCTATGTATGACTCCAATTGGGATATAGCTGGTGCGGTTACTCCATCACAGGCAAGAGTGTAACACTGGTTTTCAACTCATGGATATAAACATGACATGCAGTGTATTAAATTTTTCAATAGACTATTGCTTTATTGTTATTACTCGTTATCTTAGCTTAGCAATACCGCTCAGTAACCCTCACTACTACAAAAGAGATAACCGTTGGTTTGATATAATATTAAATGCTGCACAAGTAAGCTTTATATATTTTGGTAAACCAAACATTAAGATTTATTATTTAATGAAGAAAATCTTTCCTCAACTTTAGATCTTCAGTCTTGATTAATACATTGTTAATCTAAAGAGTGAAAGAATTTATTGTATTCACAGGTAGTAGAGCAATCAAGGATCTAG

mRNA sequence

ATGGCAATTAGCGCTAGGCTTTCCGTGGAGATAAGTTCTACACTGATGGTTGTGTCAGCTTTATCTTCCTCCATAAACCCTAATCATCATTATAGGTTTGGTCACAGTTGGCGTATGAGGCCCCAGAGAAGAAAGTCTTATTGTAGCATTAGTCAGGAAACAAACATTGTTGAGCCAGAGAAGAATCAGAACACATCAATAGAAAAGCAAACCACCAAGAAAGCAATCAGAGAATCTCCAATATCCCAGAAAGGTTGTCCTCCTCTGGTTAATGCATTGAAAGTTTCAGCTGAGCAAAAAGCGGCTCGTTTTCACTTTCCTGGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCTCATTGGTCTGAAACCATTTATGCATGATTTACCCAAGCTACGGGAGCTGGACAACCTATTTTGTCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGGAGCATCAGAAACATGGTTCCTCGTTGGAGGAACATGTGGAATTCAGGCTGCAACTATGGCAACTTGCTCCCCAGGAGATCATATAATTTTTCCAAGGAATGCCCATGTATCCGTCATATCAGCTTTGGTGTTATCTGGTGCAATACCGAAATACATTATGCCTATGTATGACTCCAATTGGGATATAGCTGGTGCGGTTACTCCATCACAGGTAGTAGAGCAATCAAGGATCTAG

Coding sequence (CDS)

ATGGCAATTAGCGCTAGGCTTTCCGTGGAGATAAGTTCTACACTGATGGTTGTGTCAGCTTTATCTTCCTCCATAAACCCTAATCATCATTATAGGTTTGGTCACAGTTGGCGTATGAGGCCCCAGAGAAGAAAGTCTTATTGTAGCATTAGTCAGGAAACAAACATTGTTGAGCCAGAGAAGAATCAGAACACATCAATAGAAAAGCAAACCACCAAGAAAGCAATCAGAGAATCTCCAATATCCCAGAAAGGTTGTCCTCCTCTGGTTAATGCATTGAAAGTTTCAGCTGAGCAAAAAGCGGCTCGTTTTCACTTTCCTGGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCTCATTGGTCTGAAACCATTTATGCATGATTTACCCAAGCTACGGGAGCTGGACAACCTATTTTGTCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGGAGCATCAGAAACATGGTTCCTCGTTGGAGGAACATGTGGAATTCAGGCTGCAACTATGGCAACTTGCTCCCCAGGAGATCATATAATTTTTCCAAGGAATGCCCATGTATCCGTCATATCAGCTTTGGTGTTATCTGGTGCAATACCGAAATACATTATGCCTATGTATGACTCCAATTGGGATATAGCTGGTGCGGTTACTCCATCACAGGTAGTAGAGCAATCAAGGATCTAG

Protein sequence

MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPEKNQNTSIEKQTTKKAIRESPISQKGCPPLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTCGIQAATMATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQVVEQSRI*

Homology

[Close]

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot
Match: P21885 (Arginine decarboxylase OS=Bacillus subtilis (strain 168) OX=224308 GN=speA PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 4.2e-26
Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 88  PLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDLPKLRELDNLFCPEGP 147
           PL   LK  A ++  +FH PGH +G      F Q IG      DL  +  LD+L  P+G 
Sbjct: 7   PLYTGLKKHASRQPVQFHIPGHKKGAGMDPEFRQFIGENALSIDLINIEPLDDLHAPKGI 66

Query: 148 ILEAQQQAAKLFGASETWFLVGGTCG-IQAATMATCSPGDHIIFPRNAHVSVISALVLSG 207
           I +AQ  AA+ FGA  T+F V GT G I    MA C PGD II PRN H S+++A+V SG
Sbjct: 67  IKQAQDLAAEAFGADHTFFSVQGTSGAIMTMVMAVCGPGDKIIIPRNVHKSIMTAIVFSG 126

Query: 208 AIPKYIMPMYDSNWDIAGAVT 228
           A+P +I P  D+   I+  +T
Sbjct: 127 AVPIFIHPEIDNELGISHGIT 147

[Close]

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot
Match: Q819L4 (Arginine decarboxylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=speA PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 58/145 (40.00%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 88  PLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDLPKLRELDNLFCPEGP 147
           PL  AL   +++   +FH PGH +G+    +F + IG      DL  +  LD+L  P+G 
Sbjct: 7   PLFTALVEHSKRNPIQFHIPGHKKGQGMDPTFREFIGHNALAIDLINIAPLDDLHHPKGM 66

Query: 148 ILEAQQQAAKLFGASETWFLVGGTCG-IQAATMATCSPGDHIIFPRNAHVSVISALVLSG 207
           I EAQ  AA  FGA  T+F + GT G I    M+ C PGD I+ PRN H SV+SA++ SG
Sbjct: 67  IKEAQDLAAAAFGADHTFFSIQGTSGAIMTMVMSVCGPGDKILVPRNVHKSVMSAIIFSG 126

Query: 208 AIPKYIMPMYDSNWDIAGAVTPSQV 232
           A P ++ P  D    I+  +T   V
Sbjct: 127 AKPIFMHPEIDPKLGISHGITIQSV 151

[Close]

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot
Match: Q81MS2 (Arginine decarboxylase OS=Bacillus anthracis OX=1392 GN=speA PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 0


Query: 88  PLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDLPKLRELDNLFCPEGP 147
           PL  AL   +++   +FH PGH +G+     F + IG      DL  +  LD+L  P+G 
Sbjct: 10  PLFTALVEHSKRNPIQFHIPGHKKGQGMDPEFREFIGHNALAIDLINIAPLDDLHHPKGM 69

Query: 148 ILEAQQQAAKLFGASETWFLVGGTCG-IQAATMATCSPGDHIIFPRNAHVSVISALVLSG 207
           I EAQ  AA  FGA  T+F + GT G I    M+ C PGD I+ PRN H SV+SA++ SG
Sbjct: 70  IKEAQDLAAAAFGADHTFFSIQGTSGAIMTMVMSVCGPGDKILVPRNVHKSVMSAIIFSG 129

Query: 208 AIPKYIMPMYDSNWDIAGAVTPSQV 232
           A P ++ P  D    I+  +T   V
Sbjct: 130 AKPIFMHPEIDPKLGISHGITIQSV 154

[Close]

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot
Match: Q9K9K5 (Arginine decarboxylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=speA PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 81  ISQKGCPPLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDLPKLRELDN 140
           +S++   PL + +   A+    +FH PGH +G     +F   IG      DL  +  LD+
Sbjct: 1   MSRQEQTPLFSGVVAHAKHNPVQFHIPGHKKGAGMDPAFRSFIGDNALSIDLINIGPLDD 60

Query: 141 LFCPEGPILEAQQQAAKLFGASETWFLVGGTCG-IQAATMATCSPGDHIIFPRNAHVSVI 200
           L  P G I EAQ+ AA+ FGA  T+F V GT G I    M+   PG+ II PRN H S++
Sbjct: 61  LHHPHGIIKEAQELAAEAFGADHTFFSVQGTSGAIMTMIMSVVGPGEKIIVPRNVHKSIM 120

Query: 201 SALVLSGAIPKYIMPMYDSNWDIAGAVT 228
           SA+V SGA P +I P  D    I+  +T
Sbjct: 121 SAIVFSGATPVFIHPEIDPLLGISHGIT 148

[Close]

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot
Match: P37536 (Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168) OX=224308 GN=yaaO PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-18
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 88  PLVNALKVSAEQKAARFHFPGHNRGRA----GPSSFTQLIGLKPFMHDLPKLRELDNLFC 147
           PL  AL   A + +  FH PGH+ G        S F  L+ +     D+ +L  LD+L  
Sbjct: 4   PLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTI-----DVTELAGLDDLHH 63

Query: 148 PEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAATMATCSPGDHIIFPRNAHVSVISAL 207
           P G I EAQ+ A++L+G++E++FLV G T G  A  ++ C PGD I+  RN H SV  A+
Sbjct: 64  PSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKSVFHAV 123

Query: 208 VLSGAIPKYIMPMYDS 219
            LSGA P Y+ P  DS
Sbjct: 124 DLSGAEPVYLAPDVDS 134

[Close]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL
Match: A0A0A0LQ21 (OKR_DC_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025850 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123
Identity = 228/233 (97.85%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           MAIS+R SVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE
Sbjct: 1   MAISSRFSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
           KNQNTSIEKQTTKKAIRESPISQKGC PPLVNALKVSAEQ AARFHFPGHNRGRAGPSSF
Sbjct: 61  KNQNTSIEKQTTKKAIRESPISQKGCPPPLVNALKVSAEQNAARFHFPGHNRGRAGPSSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAAT
Sbjct: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAT 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV
Sbjct: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 233

[Close]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL
Match: A0A0A0LR51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424710 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.9e-102
Identity = 191/233 (81.97%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           M +SA   VEI+S  MV S LSSSINPNHH+RFGHSW   PQRR+SYCSI QETNIVEP+
Sbjct: 1   MTVSASFPVEINSATMVFSPLSSSINPNHHFRFGHSWSRTPQRRRSYCSIPQETNIVEPK 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
            N++ S +K  TKK IRES ISQ+G  PPLVNALKVSA+Q AARFHFPGHNRGRAGP SF
Sbjct: 61  HNEDRSRKKHPTKKVIRESSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLP+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA 
Sbjct: 121 TQLIGLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAI 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           MATCSPGDHII PRN+HVSVISALVLSGAIPKYIMP+YDSNWDIAG VTPSQ+
Sbjct: 181 MATCSPGDHIILPRNSHVSVISALVLSGAIPKYIMPVYDSNWDIAGVVTPSQI 233

[Close]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL
Match: A0A5A7SNX5 (Arginine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00290 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.7e-100
Identity = 189/236 (80.08%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           MA+SA   VE +S +MV+ ALS SINPNHH++FGH W  RPQRRKS CSI QETNIVEP+
Sbjct: 1   MAVSAWFPVETNSRMMVLPALSHSINPNHHFQFGHCWTRRPQRRKSCCSIRQETNIVEPK 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
            NQ+ S +K  +KKAIRE  ISQ+G  PPLVNALKVSA+Q AARFHFPGHNRGRAGP SF
Sbjct: 61  PNQDRSRKKHRSKKAIREPSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLP+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA 
Sbjct: 121 TQLIGLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAI 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQVVEQ 235
           MATCSPGDHII PRN+H+SVISALVLSGAIPKYIMP+YDSNWDIAG VTPSQ  E+
Sbjct: 181 MATCSPGDHIILPRNSHISVISALVLSGAIPKYIMPVYDSNWDIAGEVTPSQASEE 236

[Close]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL
Match: A0A6J1E1Q8 (uncharacterized protein LOC111429785 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429785 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.9e-92
Identity = 176/220 (80.00%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 15  LMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPEKNQNTSIEKQTTKK 74
           +M  S LSSSI  NHH+R GH W  RPQRRKS  SI QET+IV+P+ NQ+ S +KQT+ K
Sbjct: 1   MMTSSPLSSSIISNHHFRLGHDWSRRPQRRKSCFSIRQETSIVKPKNNQDGSSKKQTSTK 60

Query: 75  AIRESPISQKGCP--PLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDL 134
           AI ESPISQ+G    PLVNALKVSAE+ AARFHFPGHN GRA PSSFTQLIGLKPFMHDL
Sbjct: 61  AIGESPISQEGSSTLPLVNALKVSAEKDAARFHFPGHNGGRAAPSSFTQLIGLKPFMHDL 120

Query: 135 PKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAATMATCSPGDHIIFP 194
           P+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA MATCSPGDHII P
Sbjct: 121 PELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATCSPGDHIILP 180

Query: 195 RNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           RN+H+SVISALV+SGAIPKYIMP YDSNWDIAG VTPSQV
Sbjct: 181 RNSHISVISALVISGAIPKYIMPEYDSNWDIAGGVTPSQV 220

[Close]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL
Match: A0A6J1JDD3 (uncharacterized protein LOC111484796 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484796 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.3e-91
Identity = 175/220 (79.55%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 15  LMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPEKNQNTSIEKQTTKK 74
           +M  S LSSSI+ NHH+R GH W  RPQRRKS  SI QET+IV+P+ NQ+   +KQT+ K
Sbjct: 1   MMTSSPLSSSISLNHHFRLGHDWSRRPQRRKSCFSIRQETSIVKPKNNQDGPSKKQTSTK 60

Query: 75  AIRESPISQKGCP--PLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDL 134
           AI ESPISQ+G    PLVNALKVSAE+ AARFHFPGHN GRA PSSFTQLIGLKPFMHDL
Sbjct: 61  AIGESPISQEGSRTLPLVNALKVSAEKDAARFHFPGHNGGRAAPSSFTQLIGLKPFMHDL 120

Query: 135 PKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAATMATCSPGDHIIFP 194
           P+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA MATCSPGDHII P
Sbjct: 121 PELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATCSPGDHIILP 180

Query: 195 RNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           RN+H+SVISALV+SGAIPKYIMP YDSNWDIAG VTPSQV
Sbjct: 181 RNSHISVISALVISGAIPKYIMPEYDSNWDIAGGVTPSQV 220

[Close]

BLAST of CSPI01G04610 vs. NCBI nr
Match: XP_031741397.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101205792 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 8.0e-123
Identity = 228/233 (97.85%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           MAIS+R SVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE
Sbjct: 1   MAISSRFSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
           KNQNTSIEKQTTKKAIRESPISQKGC PPLVNALKVSAEQ AARFHFPGHNRGRAGPSSF
Sbjct: 61  KNQNTSIEKQTTKKAIRESPISQKGCPPPLVNALKVSAEQNAARFHFPGHNRGRAGPSSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAAT
Sbjct: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAT 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV
Sbjct: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 233

[Close]

BLAST of CSPI01G04610 vs. NCBI nr
Match: KGN63903.1 (hypothetical protein Csa_013435 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 8.0e-123
Identity = 228/233 (97.85%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           MAIS+R SVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE
Sbjct: 1   MAISSRFSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
           KNQNTSIEKQTTKKAIRESPISQKGC PPLVNALKVSAEQ AARFHFPGHNRGRAGPSSF
Sbjct: 61  KNQNTSIEKQTTKKAIRESPISQKGCPPPLVNALKVSAEQNAARFHFPGHNRGRAGPSSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAAT
Sbjct: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAT 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV
Sbjct: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 233

[Close]

BLAST of CSPI01G04610 vs. NCBI nr
Match: XP_011650023.1 (uncharacterized protein LOC101211215 [Cucumis sativus] >KGN63292.1 hypothetical protein Csa_022366 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.0e-101
Identity = 191/233 (81.97%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           M +SA   VEI+S  MV S LSSSINPNHH+RFGHSW   PQRR+SYCSI QETNIVEP+
Sbjct: 1   MTVSASFPVEINSATMVFSPLSSSINPNHHFRFGHSWSRTPQRRRSYCSIPQETNIVEPK 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
            N++ S +K  TKK IRES ISQ+G  PPLVNALKVSA+Q AARFHFPGHNRGRAGP SF
Sbjct: 61  HNEDRSRKKHPTKKVIRESSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLP+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA 
Sbjct: 121 TQLIGLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAI 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           MATCSPGDHII PRN+HVSVISALVLSGAIPKYIMP+YDSNWDIAG VTPSQ+
Sbjct: 181 MATCSPGDHIILPRNSHVSVISALVLSGAIPKYIMPVYDSNWDIAGVVTPSQI 233

[Close]

BLAST of CSPI01G04610 vs. NCBI nr
Match: KAA0032520.1 (arginine decarboxylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 5.6e-100
Identity = 189/236 (80.08%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MAISARLSVEISSTLMVVSALSSSINPNHHYRFGHSWRMRPQRRKSYCSISQETNIVEPE 60
           MA+SA   VE +S +MV+ ALS SINPNHH++FGH W  RPQRRKS CSI QETNIVEP+
Sbjct: 1   MAVSAWFPVETNSRMMVLPALSHSINPNHHFQFGHCWTRRPQRRKSCCSIRQETNIVEPK 60

Query: 61  KNQNTSIEKQTTKKAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSF 120
            NQ+ S +K  +KKAIRE  ISQ+G  PPLVNALKVSA+Q AARFHFPGHNRGRAGP SF
Sbjct: 61  PNQDRSRKKHRSKKAIREPSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSF 120

Query: 121 TQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAAT 180
           TQLIGLKPFMHDLP+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA 
Sbjct: 121 TQLIGLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAI 180

Query: 181 MATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQVVEQ 235
           MATCSPGDHII PRN+H+SVISALVLSGAIPKYIMP+YDSNWDIAG VTPSQ  E+
Sbjct: 181 MATCSPGDHIILPRNSHISVISALVLSGAIPKYIMPVYDSNWDIAGEVTPSQASEE 236

[Close]

BLAST of CSPI01G04610 vs. NCBI nr
Match: XP_038878280.1 (arginine decarboxylase-like [Benincasa hispida])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 188/220 (85.45%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 15  LMVVSALSSSINP-NHHYRFGHSWRMRPQRRKSYCSISQETNIVEPEKNQNTSIEKQTTK 74
           +MV SALSSSINP NHH+RFGHSW  R QRRKSYCSI QE NIVEP+ NQ+ S +KQTT+
Sbjct: 1   MMVSSALSSSINPQNHHFRFGHSWSRRRQRRKSYCSIRQEANIVEPKHNQDRSRKKQTTE 60

Query: 75  KAIRESPISQKGC-PPLVNALKVSAEQKAARFHFPGHNRGRAGPSSFTQLIGLKPFMHDL 134
           KAIR  PISQ+G  PPLVNALKVSAEQ AARFHFPGHNRGRAGP SFTQLIGLKPF+HDL
Sbjct: 61  KAIRVPPISQEGSPPPLVNALKVSAEQNAARFHFPGHNRGRAGPPSFTQLIGLKPFVHDL 120

Query: 135 PKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG-TCGIQAATMATCSPGDHIIFP 194
           P+L ELDNLFCPEGPILEAQQQAAKLFGASETWFLVGG TCGIQAA MATCSPGDHII P
Sbjct: 121 PELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATCSPGDHIILP 180

Query: 195 RNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQV 232
           RN+HVSVISALVLSGAIPKYIMP+YDSNWDIAG VTPSQV
Sbjct: 181 RNSHVSVISALVLSGAIPKYIMPVYDSNWDIAGEVTPSQV 220

The following BLAST results are available for this feature:

BLAST of CSPI01G04610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21885	4.2e-26	43.26	Arginine decarboxylase OS=Bacillus subtilis (strain 168) OX=224308 GN=speA PE=1 ...	[more]
Q819L4	2.0e-23	40.00	Arginine decarboxylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152...	[more]
Q81MS2	2.6e-23	40.00	Arginine decarboxylase OS=Bacillus anthracis OX=1392 GN=speA PE=3 SV=1	[more]
Q9K9K5	1.1e-21	39.19	Arginine decarboxylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 /...	[more]
P37536	4.3e-18	41.18	Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168) OX=224308 GN=yaaO...	[more]

BLAST of CSPI01G04610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ21	3.9e-123	97.85	OKR_DC_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025850 PE...	[more]
A0A0A0LR51	4.9e-102	81.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424710 PE=3 SV=1	[more]
A0A5A7SNX5	2.7e-100	80.08	Arginine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1E1Q8	7.9e-92	80.00	uncharacterized protein LOC111429785 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JDD3	2.3e-91	79.55	uncharacterized protein LOC111484796 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI01G04610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741397.1	8.0e-123	97.85	LOW QUALITY PROTEIN: uncharacterized protein LOC101205792 [Cucumis sativus]	[more]
KGN63903.1	8.0e-123	97.85	hypothetical protein Csa_013435 [Cucumis sativus]	[more]
XP_011650023.1	1.0e-101	81.97	uncharacterized protein LOC101211215 [Cucumis sativus] >KGN63292.1 hypothetical ...	[more]
KAA0032520.1	5.6e-100	80.08	arginine decarboxylase-like [Cucumis melo var. makuwa]	[more]
XP_038878280.1	1.1e-98	85.45	arginine decarboxylase-like [Benincasa hispida]	[more]

BLAST of CSPI01G04610 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000310	Orn/Lys/Arg decarboxylase, major domain	PFAM	PF01276	OKR_DC_1	coord: 87..232 e-value: 4.6E-32 score: 111.3
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 87..236 e-value: 1.7E-48 score: 167.3
None	No IPR available	PANTHER	PTHR43277	ARGININE DECARBOXYLASE	coord: 54..231
None	No IPR available	PANTHER	PTHR43277:SF5	ARGININE DECARBOXYLASE-LIKE ISOFORM X1	coord: 54..231
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 87..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G04610.1	CSPI01G04610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity