CSPI01G03750 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G03750
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 2339310 .. 2340261 (+)
RNA-Seq ExpressionCSPI01G03750
SyntenyCSPI01G03750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAGATCTGGAAAAATAAATAACATATATTATTGATATATTATAAGATAGTAATTTTTTTCAGTTTACAATTCCCATTAAATACAATATTAGGGGGAAAAAAAAGAAAAAATATTTATATAATTTATTTATGACATCACGGATTTTGTCGCCGGCGTTCAAAATCCGATCACAAGCCGTCGCTCTGTTGTACTGCCAGAGCTATATTCAAATCCAATCGCAACCCATTTTCCTCCACCACTTCCTTCCCCTTCCCACGTCGGCTCACCTCCGCCGGCGACGGAGCCGCCATACTCAGTCCCTTCTTCTCCTCTTCCTCCTCCTCCTTTTTCTCTTGCTGATCTGCCGCAGCAGCAACCACCGCACTCAAACTCTTCGCCAACATCCCTCTCTCCACTCCAAAATACTCCGCCATTTGCTTCATCCGCCGGAGTATCATATAGAACTCCTCGACCTCCTCGTCGGTTGGCTCCTCCGCTGCCGGGGTCGGCGTATCGTCGTTTTTGGTTTTCTTTTCATGAATTTCGGCTCTGTTTTCCATCTGCCTCTTTCGCTTTTCCTTTCCCATTTTTGAAATTTTTCTTGGGTTAAAGTGAAAAATTCAAAGAAAGGAAAAGACGAAGGGAAATTTTGTTTACGGAAGAAAATGGGATTTATTAATGGGAGAATATAAAGAGTAAGGAAAAAAGAAAAAGGGAAACGATTCTTTGAAAAAATATTGGAAGCCATAAATAATAGAAGAATGAGACTTGAAGGTTTGGTATACTTAACAAATACAAAAACGTAAAATTAGTCATAAGTGCTTTTTGGTTAATGGAAAAAAAAATTGCTTTGAGACTTATGAATAAAAGAACTTGGCTTCCCCTTCACATTTATTAATTACCAATCCTACATCCATCACAAATAGATTAGCTTCCTACTTAATTCTTTCACGTAGCAGGTTAAACGAAG

mRNA sequence

GTTTAGATCTGGAAAAATAAATAACATATATTATTGATATATTATAAGATAGTAATTTTTTTCAGTTTACAATTCCCATTAAATACAATATTAGGGGGAAAAAAAAGAAAAAATATTTATATAATTTATTTATGACATCACGGATTTTGTCGCCGGCGTTCAAAATCCGATCACAAGCCGTCGCTCTGTTGTACTGCCAGAGCTATATTCAAATCCAATCGCAACCCATTTTCCTCCACCACTTCCTTCCCCTTCCCACGTCGGCTCACCTCCGCCGGCGACGGAGCCGCCATACTCAGTCCCTTCTTCTCCTCTTCCTCCTCCTCCTTTTTCTCTTGCTGATCTGCCGCAGCAGCAACCACCGCACTCAAACTCTTCGCCAACATCCCTCTCTCCACTCCAAAATACTCCGCCATTTGCTTCATCCGCCGGAGTATCATATAGAACTCCTCGACCTCCTCGTCGGTTGGCTCCTCCGCTGCCGGGGTCGGCGTATCGTCGTTTTTGGTTTTCTTTTCATGAATTTCGGCTCTGTTTTCCATCTGCCTCTTTCGCTTTTCCTTTCCCATTTTTGAAATTTTTCTTGGGTTAAAGTGAAAAATTCAAAGAAAGGAAAAGACGAAGGGAAATTTTGTTTACGGAAGAAAATGGGATTTATTAATGGGAGAATATAAAGAGTAAGGAAAAAAGAAAAAGGGAAACGATTCTTTGAAAAAATATTGGAAGCCATAAATAATAGAAGAATGAGACTTGAAGGTTTGGTATACTTAACAAATACAAAAACGTAAAATTAGTCATAAGTGCTTTTTGGTTAATGGAAAAAAAAATTGCTTTGAGACTTATGAATAAAAGAACTTGGCTTCCCCTTCACATTTATTAATTACCAATCCTACATCCATCACAAATAGATTAGCTTCCTACTTAATTCTTTCACGTAGCAGGTTAAACGAAG

Coding sequence (CDS)

ATGACATCACGGATTTTGTCGCCGGCGTTCAAAATCCGATCACAAGCCGTCGCTCTGTTGTACTGCCAGAGCTATATTCAAATCCAATCGCAACCCATTTTCCTCCACCACTTCCTTCCCCTTCCCACGTCGGCTCACCTCCGCCGGCGACGGAGCCGCCATACTCAGTCCCTTCTTCTCCTCTTCCTCCTCCTCCTTTTTCTCTTGCTGATCTGCCGCAGCAGCAACCACCGCACTCAAACTCTTCGCCAACATCCCTCTCTCCACTCCAAAATACTCCGCCATTTGCTTCATCCGCCGGAGTATCATATAGAACTCCTCGACCTCCTCGTCGGTTGGCTCCTCCGCTGCCGGGGTCGGCGTATCGTCGTTTTTGGTTTTCTTTTCATGAATTTCGGCTCTGTTTTCCATCTGCCTCTTTCGCTTTTCCTTTCCCATTTTTGA

Protein sequence

MTSRILSPAFKIRSQAVALLYCQSYIQIQSQPIFLHHFLPLPTSAHLRRRRSRHTQSLLLLFLLLLFLLLICRSSNHRTQTLRQHPSLHSKILRHLLHPPEYHIELLDLLVGWLLRCRGRRIVVFGFLFMNFGSVFHLPLSLFLSHF*
Homology
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BLAST of CSPI01G03750 vs. ExPASy TrEMBL
Match: A0A0A0LPJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023030 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MTSRILSPAFKIRSQAVALLYCQSYIQIQSQPIFLHHFLPLPTSAHLRRRRSRHTQSLLL 60
           MTSRILSPAFKIRSQAVALLYCQSYIQIQSQPIFLHHFLPLPTSAHLRRRRSRHTQSLLL
Sbjct: 1   MTSRILSPAFKIRSQAVALLYCQSYIQIQSQPIFLHHFLPLPTSAHLRRRRSRHTQSLLL 60

Query: 61  LFLLLLFLLLICRSSNHRTQTLRQHPSLHSKILRHLLHPPEYHIELLDLLVGWLLRCRGR 120
           LFLLLLFLLLICRSSNHRTQTLRQHPSLHSKILRHLLHPPEYHIELLDLLVGWLLRCRGR
Sbjct: 61  LFLLLLFLLLICRSSNHRTQTLRQHPSLHSKILRHLLHPPEYHIELLDLLVGWLLRCRGR 120

Query: 121 RIVVFGFLFMNFGSVFHLPLSLFLSHF 148
           RIVVFGFLFMNFGSVFHLPLSLFLSHF
Sbjct: 121 RIVVFGFLFMNFGSVFHLPLSLFLSHF 147

The following BLAST results are available for this feature:
BLAST of CSPI01G03750 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G03750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPJ71.2e-74100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023030 PE=4 SV=1[more]
BLAST of CSPI01G03750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI01G03750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G03750.1CSPI01G03750.1mRNA