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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTCGCTTTTTCACACGTGTGAGTACATTTTGGTAATTACACGTCAACTATGAGTTATTCCACGTATTTAAAAAAGTAAGGGATGATTTCACATATTTATAATTTTGAGGTCTAACCATCAGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA mRNA sequence ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA Coding sequence (CDS) ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA Protein sequence MDESDTNKTEQMNENGTNKDRVRYKTCEMEGSKMVDSVNLSANPTEPPSKRHIKVSPVGGNSSPASSTFRVLRQH*
Homology
BLAST of CSPI01G02810 vs. ExPASy TrEMBL
Match: A0A0A0LUM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013200 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.7e-30 Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 0
Query: 1 MDESDTNKTEQMNENGTNKDRVRYKTCEMEGSKM-------VDSVNLSANPTEPPSKRHI 60
MD+SDTNKTEQMNENGTNKDRVRY+TCEMEGSKM VDSVNLSANPTEPPSKRHI
Sbjct: 1 MDKSDTNKTEQMNENGTNKDRVRYQTCEMEGSKMVAFSHVRVDSVNLSANPTEPPSKRHI 60
Query: 61 KVSPVGGNSSPASSTFRVLRQH 76
KVSPVGGNSSPASSTFRVLRQH
Sbjct: 61 KVSPVGGNSSPASSTFRVLRQH 82
BLAST of CSPI01G02810 vs. NCBI nr
Match: KGN63721.1 (hypothetical protein Csa_013590 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 9.6e-30 Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 0
Query: 1 MDESDTNKTEQMNENGTNKDRVRYKTCEMEGSKM-------VDSVNLSANPTEPPSKRHI 60
MD+SDTNKTEQMNENGTNKDRVRY+TCEMEGSKM VDSVNLSANPTEPPSKRHI
Sbjct: 1 MDKSDTNKTEQMNENGTNKDRVRYQTCEMEGSKMVAFSHVRVDSVNLSANPTEPPSKRHI 60
Query: 61 KVSPVGGNSSPASSTFRVLRQH 76
KVSPVGGNSSPASSTFRVLRQH
Sbjct: 61 KVSPVGGNSSPASSTFRVLRQH 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LUM7 | 4.7e-30 | 89.02 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013200 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN63721.1 | 9.6e-30 | 89.02 | hypothetical protein Csa_013590 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 36..75 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 59..75 |
Relationships
The following mRNA feature(s) are a part of this gene:
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