CSPI01G02490 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G02490
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr1: 1562477 .. 1564223 (+)
RNA-Seq Expression	CSPI01G02490
Synteny	CSPI01G02490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCACGCCATTTGTTCGATGAAATGTCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCTACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGGTTTTTCTTGTGGTCACTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATTCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATAGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTAGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTTTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTTCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAAAGAACGGGTTGTCAACCCGATTGCGTAAGCTATTATCTTATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGTAAAGGGCGTGAAATTGTGGACGAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATTCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGAGAAAGAAAGGTAAGTAAGAATCTGTCTTGAAAATAGCTTCTTGAATTTTTTGGAACTTAGTCAAATTAAATCATTTCATAGGCCTCCTTGTTCAAGATTTGTATAGTAACTTAATGATACACCATAAGATCTATCTATCTATCTATACACACAGAATGTACTCTTTTAAGCAAATCAGTTCTAGGCCTAAACGATTTTGAATGGAGATTCGGAAGATTTTTATCCTAAGATTGTGAGCCTCCACAATCATATCTAGTGTAGAAGATATGAAACTTTGATCGGTTGAGATCGAGATCGAGA

mRNA sequence

ATGCATGCACGCCATTTGTTCGATGAAATGTCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCTACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGGTTTTTCTTGTGGTCACTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATTCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATAGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTAGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTTTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTTCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAAAGAACGGGTTGTCAACCCGATTGCGTAAGCTATTATCTTATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGTAAAGGGCGTGAAATTGTGGACGAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATTCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGAGAAAGAAAGGTAAGTAAGAATCTGTCTTGAAAATAGCTTCTTGAATTTTTTGGAACTTAGTCAAATTAAATCATTTCATAGGCCTCCTTGTTCAAGATTTGTATAGTAACTTAATGATACACCATAAGATCTATCTATCTATCTATACACACAGAATGTACTCTTTTAAGCAAATCAGTTCTAGGCCTAAACGATTTTGAATGGAGATTCGGAAGATTTTTATCCTAAGATTGTGAGCCTCCACAATCATATCTAGTGTAGAAGATATGAAACTTTGATCGGTTGAGATCGAGATCGAGA

Coding sequence (CDS)

ATGCATGCACGCCATTTGTTCGATGAAATGTCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCTACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGGTTTTTCTTGTGGTCACTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATTCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATAGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTAGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTTTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTTCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAAAGAACGGGTTGTCAACCCGATTGCGTAAGCTATTATCTTATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGTAAAGGGCGTGAAATTGTGGACGAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATTCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGAGAAAGAAAGGTAAGTAA

Protein sequence

MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRKKGK*

Homology

[Close]

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 2.1e-160
Identity = 269/466 (57.73%), Postives = 357/466 (76.61%), Query Frame = 0


Query: 19  LKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 78
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 79  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVNIL 138
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 139 LSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCS 198
           LS+L+K +RAMD QTF  VAE  VK+ +E++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 199 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFC 258
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++++MKS G  PDLFC
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 259 YNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRVKESC 318
           +N+ L CLCE+NV +NPSGLVPE+LN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 319 KILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGIL 378
           +ILE MKR+GC PD  SYY + RVL+LTGRFGKG +IVDEMIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 379 CGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNC 438
           CGVER N+AL+LFEKMKRSS+GGYG VYD+LIPKLC+GG FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 439 SSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRK 485
           S  +LDPS+T+VFKP +  E   + +  +   +  A   K K K K
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLK 471

[Close]

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.8e-43
Identity = 116/415 (27.95%), Postives = 202/415 (48.67%), Query Frame = 0


Query: 76  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAV 135
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+   
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG- 164

Query: 136 NILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEK-YKCPHDQFTVVAIIT 195
             +L  + K      G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 --MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 196 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMP 255
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 256 DLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRV 315
               YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 316 KESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTP--DRKFYY 375
           +E+  +   M   GCQPD  +Y ++ R L+   R G+G E++D+M   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 376 ELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAM 435
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C   +      L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 436 GVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRKKGK 488
           G++++     +DP   K  K T+++++ +        K+ +   EK   K+K+ K
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKRLK 503

[Close]

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.8e-32
Identity = 90/371 (24.26%), Postives = 175/371 (47.17%), Query Frame = 0


Query: 66  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 125
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 126 FAQKKDYTAVNILLSNLKKAD-RAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPH 185
            ++ + + AV  L+  ++K + + ++ + F  + + F   D   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 186 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 245
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 246 KEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNIL 305
            +M   G  PD+  Y   L            +G + ++ +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 306 LSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGL 365
           +  LCK  R++E+ K+   M+R  C+ D V+Y  +       G+  K   ++D+MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 366 TPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQ 425
            P    Y  ++      E     LEL EKM++        +Y+V+I   C+ GE +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 426 LWEEAMAMGVS 436
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-26
Identity = 91/400 (22.75%), Postives = 179/400 (44.75%), Query Frame = 0


Query: 50  VSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKK 109
           + K+C+ ++      +++   L+KC + +T SLV QV+    N     +   FF+W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQ 161

Query: 110 LNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKAD--RAMDGQTFGFVAEAFVKMDRE 169
             +      +N  +    + +++  +  L++ + K +  + +   T   V     K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 170 DEALGLFKNLEK-YKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRS 229
           ++A+  F  +EK Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 230 LLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVM 289
           L++G+   +   +AR ++  MK     PD+  Y +F++  C++   +  +        ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN-------EML 341

Query: 290 MEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLT 349
            EMR    +PN ++Y I++  L K+++V E+  + E MK  GC PD   Y  +  +L  T
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 350 GRFGKGREIVDEMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGP-- 409
           GRF    EI ++M  +G+  D   Y  +I       R   AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 410 -VYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEIL 444
             Y  L+   C   + ++   L    +   VS++ S+ IL
Sbjct: 462 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491

[Close]

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.1e-26
Identity = 83/311 (26.69%), Postives = 139/311 (44.69%), Query Frame = 0


Query: 139 LSNLKKADRAMD-----GQ----TFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 198
           L N+ KA R M+     GQ     +  +   F KM+R D+A  +   +       D  T 
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 199 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 258
             +I +LCS+G    A  V+              Y  L+    ++    EA +++ EM S
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 259 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLC 318
            G  PD+F YNT ++ +C++       G+V  +  ++  +      P+ ISYNILL  L 
Sbjct: 257 RGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLRALL 316

Query: 319 KTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRK 378
              + +E  K++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTPD  
Sbjct: 317 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 376

Query: 379 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 438
            Y  LI   C   R + A+E  E M           Y+ ++  LC+ G+ +   +++ + 
Sbjct: 377 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 436

Query: 439 MAMGVSLNCSS 441
             +G S N SS
Sbjct: 437 GEVGCSPNSSS 440

[Close]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 978.0 bits (2527), Expect = 1.4e-281
Identity = 486/487 (99.79%), Postives = 487/487 (100.00%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480

Query: 481 EKRKKGK 488
           EKRKKGK
Sbjct: 481 EKRKKGK 487

[Close]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 944.9 bits (2441), Expect = 1.3e-271
Identity = 465/486 (95.68%), Postives = 481/486 (98.97%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEM LRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE N+AEKQNKAAAEKP 
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 EKRKKG 487
           +KRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL
Match: A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)

HSP 1 Score: 944.9 bits (2441), Expect = 1.3e-271
Identity = 465/486 (95.68%), Postives = 481/486 (98.97%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEM LRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE N+AEKQNKAAAEKP 
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 EKRKKG 487
           +KRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 3.1e-244
Identity = 416/487 (85.42%), Postives = 452/487 (92.81%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEMSLRRCVSLLKLKWDSF  QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
            AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESC+ILE MKRTGC+PDC+SYYL+ARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGL PDRKFYY+LIGILCGVER  YALELFEKMKRSSLGGYGPVYDVLIPKLC GG+FE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLW EAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQNKAA +K K
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSK 487

Query: 481 EKRKKGK 488
            + KK K
Sbjct: 488 ARGKKSK 494

[Close]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.7e-238
Identity = 408/487 (83.78%), Postives = 447/487 (91.79%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           M+AR +FDE SLRRCVSLLKLKWD    QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNK T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
            AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFL+CL E+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESC+ILE MKRTGC+PDC+SYYL+ARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGL PDRKFYY+LIGILCGVE   YALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K K
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSK 487

Query: 481 EKRKKGK 488
            + K+ K
Sbjct: 488 ARGKRSK 494

[Close]

BLAST of CSPI01G02490 vs. NCBI nr
Match: XP_004138304.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sativus])

HSP 1 Score: 978.0 bits (2527), Expect = 3.0e-281
Identity = 486/487 (99.79%), Postives = 487/487 (100.00%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480

Query: 481 EKRKKGK 488
           EKRKKGK
Sbjct: 481 EKRKKGK 487

[Close]

BLAST of CSPI01G02490 vs. NCBI nr
Match: XP_008453221.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis melo] >KAA0057958.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 944.9 bits (2441), Expect = 2.8e-271
Identity = 465/486 (95.68%), Postives = 481/486 (98.97%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEM LRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE N+AEKQNKAAAEKP 
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 EKRKKG 487
           +KRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of CSPI01G02490 vs. NCBI nr
Match: KAE8652422.1 (hypothetical protein Csa_013999 [Cucumis sativus])

HSP 1 Score: 914.1 bits (2361), Expect = 5.2e-262
Identity = 450/455 (98.90%), Postives = 452/455 (99.34%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTR 456
           MGRQLWEEAMAMGVSLNCSSEILDPSITK   P+R
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKKEIPSR 455

[Close]

BLAST of CSPI01G02490 vs. NCBI nr
Match: XP_038878633.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa hispida])

HSP 1 Score: 879.4 bits (2271), Expect = 1.4e-251
Identity = 432/487 (88.71%), Postives = 459/487 (94.25%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDE SLRRCVSLLKLKWDSF+ Q +CTQH FCSLHST+NNG +V KLCEVIS T
Sbjct: 24  MHARHMFDERSLRRCVSLLKLKWDSFVVQPICTQHCFCSLHSTINNGTSVLKLCEVISLT 83

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGL+ELESSLNKCTI LTSSLVTQVIDS KNE  TRRLLRFFLWSLKKLNH LEDE FN
Sbjct: 84  IGGLNELESSLNKCTIPLTSSLVTQVIDSFKNEVHTRRLLRFFLWSLKKLNHDLEDEAFN 143

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
            AIRFFAQKKDYTA++ILLSNLKKA+RAMDGQTFGFVAEA VKMDREDEALGLFKNL+KY
Sbjct: 144 YAIRFFAQKKDYTAIDILLSNLKKANRAMDGQTFGFVAEALVKMDREDEALGLFKNLDKY 203

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 204 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 263

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLFCYNTFLKCLCE+N+ KNPSGLVPE+LNVMMEMRSY+I+PNSIS
Sbjct: 264 RRILKEMKSDGTMPDLFCYNTFLKCLCEQNLAKNPSGLVPEALNVMMEMRSYRIAPNSIS 323

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL +TRRVKESC IL+ MKR+GCQP+CVSYYL+ARVLFLTGRFGKGR IVDEMI
Sbjct: 324 YNILLSCLGRTRRVKESCTILKTMKRSGCQPNCVSYYLVARVLFLTGRFGKGRGIVDEMI 383

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGL PDRKFYY+LIG+LCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 384 EEGLIPDRKFYYDLIGVLCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 443

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
            GRQLWEEAMAMGV L+CSSE+LDPSITKVFKPTRKIENKI+EE N AEKQNKAA EKPK
Sbjct: 444 KGRQLWEEAMAMGVVLSCSSEVLDPSITKVFKPTRKIENKILEECNRAEKQNKAATEKPK 503

Query: 481 EKRKKGK 488
           EKRKK K
Sbjct: 504 EKRKKSK 510

[Close]

BLAST of CSPI01G02490 vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 854.0 bits (2205), Expect = 6.4e-244
Identity = 416/487 (85.42%), Postives = 452/487 (92.81%), Query Frame = 0


Query: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEMSLRRCVSLLKLKWDSF  QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
            AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESC+ILE MKRTGC+PDC+SYYL+ARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
           EEGL PDRKFYY+LIGILCGVER  YALELFEKMKRSSLGGYGPVYDVLIPKLC GG+FE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480
           MGRQLW EAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQNKAA +K K
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSK 487

Query: 481 EKRKKGK 488
            + KK K
Sbjct: 488 ARGKKSK 494

[Close]

BLAST of CSPI01G02490 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 567.0 bits (1460), Expect = 1.5e-161
Identity = 269/466 (57.73%), Postives = 357/466 (76.61%), Query Frame = 0


Query: 19  LKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 78
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 79  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVNIL 138
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 139 LSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCS 198
           LS+L+K +RAMD QTF  VAE  VK+ +E++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 199 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFC 258
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++++MKS G  PDLFC
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 259 YNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRVKESC 318
           +N+ L CLCE+NV +NPSGLVPE+LN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 319 KILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGIL 378
           +ILE MKR+GC PD  SYY + RVL+LTGRFGKG +IVDEMIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 379 CGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNC 438
           CGVER N+AL+LFEKMKRSS+GGYG VYD+LIPKLC+GG FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 439 SSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRK 485
           S  +LDPS+T+VFKP +  E   + +  +   +  A   K K K K
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLK 471

[Close]

BLAST of CSPI01G02490 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.6e-44
Identity = 116/415 (27.95%), Postives = 202/415 (48.67%), Query Frame = 0


Query: 76  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAV 135
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+   
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG- 164

Query: 136 NILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEK-YKCPHDQFTVVAIIT 195
             +L  + K      G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 --MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 196 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMP 255
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 256 DLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRV 315
               YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 316 KESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTP--DRKFYY 375
           +E+  +   M   GCQPD  +Y ++ R L+   R G+G E++D+M   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 376 ELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAM 435
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C   +      L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 436 GVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRKKGK 488
           G++++     +DP   K  K T+++++ +        K+ +   EK   K+K+ K
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKRLK 503

[Close]

BLAST of CSPI01G02490 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 3.4e-33
Identity = 90/371 (24.26%), Postives = 175/371 (47.17%), Query Frame = 0


Query: 66  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 125
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 126 FAQKKDYTAVNILLSNLKKAD-RAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPH 185
            ++ + + AV  L+  ++K + + ++ + F  + + F   D   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 186 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 245
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 246 KEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNIL 305
            +M   G  PD+  Y   L            +G + ++ +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 306 LSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGL 365
           +  LCK  R++E+ K+   M+R  C+ D V+Y  +       G+  K   ++D+MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 366 TPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQ 425
            P    Y  ++      E     LEL EKM++        +Y+V+I   C+ GE +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 426 LWEEAMAMGVS 436
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of CSPI01G02490 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-27
Identity = 91/400 (22.75%), Postives = 179/400 (44.75%), Query Frame = 0


Query: 50  VSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKK 109
           + K+C+ ++      +++   L+KC + +T SLV QV+    N     +   FF+W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQ 161

Query: 110 LNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKAD--RAMDGQTFGFVAEAFVKMDRE 169
             +      +N  +    + +++  +  L++ + K +  + +   T   V     K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 170 DEALGLFKNLEK-YKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRS 229
           ++A+  F  +EK Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 230 LLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVM 289
           L++G+   +   +AR ++  MK     PD+  Y +F++  C++   +  +        ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN-------EML 341

Query: 290 MEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLT 349
            EMR    +PN ++Y I++  L K+++V E+  + E MK  GC PD   Y  +  +L  T
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 350 GRFGKGREIVDEMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGP-- 409
           GRF    EI ++M  +G+  D   Y  +I       R   AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 410 -VYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEIL 444
             Y  L+   C   + ++   L    +   VS++ S+ IL
Sbjct: 462 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491

[Close]

BLAST of CSPI01G02490 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 3.6e-27
Identity = 83/311 (26.69%), Postives = 139/311 (44.69%), Query Frame = 0


Query: 139 LSNLKKADRAMD-----GQ----TFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 198
           L N+ KA R M+     GQ     +  +   F KM+R D+A  +   +       D  T 
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 199 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 258
             +I +LCS+G    A  V+              Y  L+    ++    EA +++ EM S
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 259 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLC 318
            G  PD+F YNT ++ +C++       G+V  +  ++  +      P+ ISYNILL  L 
Sbjct: 257 RGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLRALL 316

Query: 319 KTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRK 378
              + +E  K++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTPD  
Sbjct: 317 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 376

Query: 379 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 438
            Y  LI   C   R + A+E  E M           Y+ ++  LC+ G+ +   +++ + 
Sbjct: 377 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 436

Query: 439 MAMGVSLNCSS 441
             +G S N SS
Sbjct: 437 GEVGCSPNSSS 440

The following BLAST results are available for this feature:

BLAST of CSPI01G02490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLJ6	2.1e-160	57.73	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
Q9FME4	7.8e-43	27.95	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FH87	4.8e-32	24.26	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
Q9LUJ4	3.0e-26	22.75	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
Q9SR00	5.1e-26	26.69	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of CSPI01G02490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPF4	1.4e-281	99.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1	[more]
A0A5A7US52	1.3e-271	95.68	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BV55	1.3e-271	95.68	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ...	[more]
A0A6J1JIV3	3.1e-244	85.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1S0	5.7e-238	83.78	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]

BLAST of CSPI01G02490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138304.1	3.0e-281	99.79	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sa...	[more]
XP_008453221.1	2.8e-271	95.68	PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial ...	[more]
KAE8652422.1	5.2e-262	98.90	hypothetical protein Csa_013999 [Cucumis sativus]	[more]
XP_038878633.1	1.4e-251	88.71	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa ...	[more]
XP_022987424.1	6.4e-244	85.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]

BLAST of CSPI01G02490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61370.1	1.5e-161	57.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G60960.1	5.6e-44	27.95	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G65820.1	3.4e-33	24.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22670.1	2.1e-27	22.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04760.1	3.6e-27	26.69	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 374..397 e-value: 1.0 score: 9.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 296..339 e-value: 6.9E-11 score: 42.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 224..265 e-value: 9.0E-5 score: 22.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 223..255 e-value: 0.0024 score: 15.9 coord: 334..367 e-value: 2.0E-4 score: 19.3 coord: 299..333 e-value: 3.9E-10 score: 37.3 coord: 405..438 e-value: 9.8E-4 score: 17.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 297..331 score: 12.802855
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 332..366 score: 9.481582
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 63..213 e-value: 4.4E-11 score: 44.6 coord: 275..360 e-value: 2.0E-17 score: 65.3 coord: 361..433 e-value: 7.3E-8 score: 34.1 coord: 214..274 e-value: 1.4E-7 score: 33.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 298..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..487
None	No IPR available	PANTHER	PTHR47938:SF9	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 35..482
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 35..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G02490.1	CSPI01G02490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding