CSPI01G02400 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G02400
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr1: 1520491 .. 1522011 (-)
RNA-Seq Expression	CSPI01G02400
Synteny	CSPI01G02400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAACCAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGATGGGTTCATTCCCATGTCAACAGTAACAATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTGGAGGAAGGGAGGAGATATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

mRNA sequence

ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAACCAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGATGGGTTCATTCCCATGTCAACAGTAACAATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTGGAGGAAGGGAGGAGATATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

Coding sequence (CDS)

ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAACCAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGATGGGTTCATTCCCATGTCAACAGTAACAATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTGGAGGAAGGGAGGAGATATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

Protein sequence

MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEINPL*

Homology

[Close]

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-97
Identity = 191/466 (40.99%), Postives = 285/466 (61.16%), Query Frame = 0


Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQ---NLFVIGKLIDFCAVSDHGDMNYAVVVF 115
           Q+   L + CS +  L QLHA  +R  + +    LF+ GK++     S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 116 DRIENADGFLWNTMIRGFGRN-RKLLMAFEFYKRMLEKGIAA-DNFTFSFLLKMTGQLGS 175
           D IEN   F+WNT+IR    +  +   AF  Y++MLE+G ++ D  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDC 235
              GKQ+H  I+K G    VYV N LIH+YG    +++AR +FDE+P+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN---NR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+ +      + 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAERVET-PDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ +R    P+ VTF+ +L ACN+ G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG-NVELGERVSSHVLEIVADHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL AC   G +VEL E ++ +++    D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G+ K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

[Close]

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 3.5e-94
Identity = 182/451 (40.35%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVS-DHGDMNYAVVVFDR 115
           Q  + L  +C++L++L Q+ A  I+   +   FV  KLI+FC  S     M+YA  +F+ 
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89

Query: 116 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLG 175
           +   D  ++N+M RG+ R    L  F  +  +LE GI  DN+TF  LLK      ++  G
Sbjct: 90  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149

Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSC 235
           +QLH   +KLGLD +VYV  TLI+MY   +DV+ AR +FD + +  +V +NA+I  +   
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209

Query: 236 GMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVF 295
              NEAL LF +M    ++P+E TL+  +S+C+ LG+LD G+W+H +   ++  K + V 
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269

Query: 296 NSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVE 355
            +LIDM+AKCG+++ A  +F  +  K+   W+ MI+  A HG AE ++ +F  M +E V+
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 329

Query: 356 TPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAY 415
            PD +TFL +L AC++ G+VEEGR+YF  M   F I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 -PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389

Query: 416 QLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSG 475
           + I  +P+    ++WR LLAAC  H N++L E+VS  + E+   H  DYV+L+N+YA + 
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449

Query: 476 QWNEMIKTRKSM-HRKGVEKPEPGNSYLEIN 505
           +W  +   RK M  RK V+   PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476

[Close]

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 346.3 bits (887), Expect = 5.9e-94
Identity = 179/442 (40.50%), Postives = 276/442 (62.44%), Query Frame = 0


Query: 66  STLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVS--DHGDMNYAVVVFDRIEN-ADGFL 125
           S++  L Q+HA  IR G   +   +GK + F  VS      M+YA  VF +IE   + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 126 WNTMIRGFGRNRKLLMAFEFYKRMLEKG-IAADNFTFSFLLKMTGQLGSIMLGKQLHVNI 185
           WNT+IRG+      + AF  Y+ M   G +  D  T+ FL+K    +  + LG+ +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 186 LKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEAL 245
           ++ G  S +YV+N+L+H+Y    DV  A  +FD++P+ DLVAWN+VI+     G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 246 DLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDMY 305
            L+ +M   G++PD  T+V  +SAC+ +GAL  G+ VH ++      + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 306 AKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTF 365
           A+CG VE A+ +F+ +  KN V+W ++I+GLA +G  ++A+ LF  M +     P  +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 366 LAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 425
           + +L AC++ G V+EG  YF  M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 426 MECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIK 485
           M+ N VIWRTLL AC +HG+ +L E     +L++  +HS DYVLL+NMYAS  +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 486 TRKSMHRKGVEKPEPGNSYLEI 504
            RK M R GV+K  PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

[Close]

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-92
Identity = 168/482 (34.85%), Postives = 284/482 (58.92%), Query Frame = 0


Query: 55  EQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDR 114
           E  F+   ++  +  +  +++ASII  G  Q+ F++ K++DFC   +  DM+YA  +F++
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 115 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGI-AADNFTFSFLLKMTGQLGSIML 174
           + N + FL+N++IR +  N         YK++L K     D FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWN-------- 234
           GKQ+H ++ K G   HV   N LI MY +  D+  A  +FDE+ + D+++WN        
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 235 -----------------------AVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVT 294
                                  A+I  +   G Y EA+D F +M  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 295 ISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNI 354
           + +C+ LG+L+ G+W+H +       K   V N+LI+MY+KCG +  A ++F  + GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 355 VTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFD 414
           ++W+TMI G A HG+A  A+  F+ M   +V+ P+G+TFL +L AC++ G  +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 415 LMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNV 474
           +M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM+ ++ IW +LL++C+  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 475 ELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLE 505
           ++      H++E+  +   +YVLLAN+YA  G+W ++ + RK +  + ++K  PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

[Close]

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.1e-91
Identity = 181/489 (37.01%), Postives = 282/489 (57.67%), Query Frame = 0


Query: 50  GYFAKEQKFMFLFKQCS---TLKDLNQLHASIIRLGFDQNLFV----------IGKLIDF 109
           G       F F+ K C+     K+  Q+H  +++LG D +L+V           G+L D 
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188

Query: 110 CAVSD-------------------HGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLL 169
             V D                    G +  A  +FD I   D   WN MI G+       
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248

Query: 170 MAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLI 229
            A E +K M++  +  D  T   ++    Q GSI LG+Q+H+ I   G  S++ + N LI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308

Query: 230 HMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEA 289
            +Y +  ++  A  LF+ LP  D+++WN +I  +    +Y EAL LF +ML+SG  P++ 
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368

Query: 290 TLVVTISACSALGALDCGRWVHSHVNSNNRGKTIA--VFNSLIDMYAKCGAVEYAREMFN 349
           T++  + AC+ LGA+D GRW+H +++   +G T A  +  SLIDMYAKCG +E A ++FN
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428

Query: 350 AVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVE 409
           ++  K++ +WN MI G A HG A+ +  LFS M    ++ PD +TF+ +L AC++ G ++
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLD 488

Query: 410 EGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAA 469
            GR  F  MT+ + + P L+HYG M+D+LG +G  +EA ++I  M ME + VIW +LL A
Sbjct: 489 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 548

Query: 470 CQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPE 505
           C+MHGNVELGE  + ++++I  ++   YVLL+N+YAS+G+WNE+ KTR  ++ KG++K  
Sbjct: 549 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-V 608

[Close]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL
Match: A0A0A0LUI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1)

HSP 1 Score: 1026.9 bits (2654), Expect = 2.8e-296
Identity = 504/506 (99.60%), Postives = 505/506 (99.80%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLK ATDTIPNGGYFAKEQKFMF
Sbjct: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG
Sbjct: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN+RGKTIAVFNSLIDM
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSMHRKGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 506

[Close]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL
Match: A0A5A7UQ05 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002560 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 3.8e-277
Identity = 471/506 (93.08%), Postives = 485/506 (95.85%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MILIN RKLNLALSLCSH KI FS FQL+VPRFIW+SG K ATDTIPNGGYFAKEQ  MF
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLK LNQLHA IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAV VFDRIEN DG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR RKLLMAFEFYKRMLEKGI ADNFTFSFLLK+TGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           LDLF+QMLQSGVEPDEATLVVT+SACSALGALD GRW+HSHVNSN+RGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAV+YAREMFNA+SGKN+VTWNTMIMGLATHGDAEDALTLFSNML E+VETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACN+GGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNV+LGERVSSHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM +KGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

[Close]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL
Match: A0A1S3BWU9 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 3.8e-277
Identity = 471/506 (93.08%), Postives = 485/506 (95.85%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MILIN RKLNLALSLCSH KI FS FQL+VPRFIW+SG K ATDTIPNGGYFAKEQ  MF
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLK LNQLHA IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAV VFDRIEN DG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR RKLLMAFEFYKRMLEKGI ADNFTFSFLLK+TGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           LDLF+QMLQSGVEPDEATLVVT+SACSALGALD GRW+HSHVNSN+RGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAV+YAREMFNA+SGKN+VTWNTMIMGLATHGDAEDALTLFSNML E+VETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACN+GGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNV+LGERVSSHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM +KGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

[Close]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL
Match: A0A6J1JI60 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484809 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.2e-251
Identity = 426/505 (84.36%), Postives = 460/505 (91.09%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLALSLCS V+I F +FQLL+P++IWSS  K  TDTIPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQLHA  I+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIAADNFTFSFLLK++GQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDV +ARNLFDE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  N+RGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAE++ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL
Match: A0A6J1E6Y6 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429989 PE=4 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 6.7e-250
Identity = 426/505 (84.36%), Postives = 457/505 (90.50%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLA SL S V+I F +FQLL+P+FIWSS  K  TD IPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQLHA II+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIAADNFTFSFLLK+ GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYG LKDV +ARNLFDE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  N+ GKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAE++ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]

BLAST of CSPI01G02400 vs. NCBI nr
Match: XP_004138302.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis sativus] >KGN63681.1 hypothetical protein Csa_014198 [Cucumis sativus])

HSP 1 Score: 1026.9 bits (2654), Expect = 5.8e-296
Identity = 504/506 (99.60%), Postives = 505/506 (99.80%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLK ATDTIPNGGYFAKEQKFMF
Sbjct: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG
Sbjct: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN+RGKTIAVFNSLIDM
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSMHRKGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 506

[Close]

BLAST of CSPI01G02400 vs. NCBI nr
Match: XP_008453215.2 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis melo] >KAA0057953.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.4 bits (2489), Expect = 7.8e-277
Identity = 471/506 (93.08%), Postives = 485/506 (95.85%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MILIN RKLNLALSLCSH KI FS FQL+VPRFIW+SG K ATDTIPNGGYFAKEQ  MF
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLK LNQLHA IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAV VFDRIEN DG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR RKLLMAFEFYKRMLEKGI ADNFTFSFLLK+TGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           LDLF+QMLQSGVEPDEATLVVT+SACSALGALD GRW+HSHVNSN+RGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAV+YAREMFNA+SGKN+VTWNTMIMGLATHGDAEDALTLFSNML E+VETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACN+GGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNV+LGERVSSHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM +KGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

[Close]

BLAST of CSPI01G02400 vs. NCBI nr
Match: XP_038880037.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])

HSP 1 Score: 894.0 bits (2309), Expect = 5.8e-256
Identity = 437/506 (86.36%), Postives = 468/506 (92.49%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MI+I  RK NLALSL S VK  F +FQLLVP+F+WSS  K ATDTIPNG YFAKEQ+F+ 
Sbjct: 1   MIVITSRKANLALSLFSQVKFKFPHFQLLVPKFVWSSDRKTATDTIPNGSYFAKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           L KQCST+KDLNQLHA II+LGFDQNLFVIGKLI+FCAVS++GDMNYAVVVF+ IEN DG
Sbjct: 61  LSKQCSTVKDLNQLHARIIQLGFDQNLFVIGKLIEFCAVSNYGDMNYAVVVFNGIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR  KLL AFEFYKRMLEKGIAADNFTFSFLLK++GQ GSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISKLLKAFEFYKRMLEKGIAADNFTFSFLLKISGQSGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILK+GLDSHVYVRNTLIHMYGRLKDV IARNLFDE+PK DLVAWNAVIDCHVSCGMY+EA
Sbjct: 181 ILKVGLDSHVYVRNTLIHMYGRLKDVKIARNLFDEMPKPDLVAWNAVIDCHVSCGMYSEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  N++GKTIAV NSLIDM
Sbjct: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKRNDKGKTIAVLNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA+S KN+VTWNTMIMGLATHGDAEDALTLFSNMLA++VETPDGVT
Sbjct: 301 YAKCGAVEDAREMFNAMSDKNVVTWNTMIMGLATHGDAEDALTLFSNMLAKKVETPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGR YF LMTKHFNIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGREYFHLMTKHFNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM RKGV+KPEPGNSYLEIN L
Sbjct: 481 KTRKSMQRKGVQKPEPGNSYLEINQL 506

[Close]

BLAST of CSPI01G02400 vs. NCBI nr
Match: XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 878.6 bits (2269), Expect = 2.5e-251
Identity = 426/505 (84.36%), Postives = 460/505 (91.09%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLALSLCS V+I F +FQLL+P++IWSS  K  TDTIPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQLHA  I+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIAADNFTFSFLLK++GQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLKDV +ARNLFDE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  N+RGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAE++ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]

BLAST of CSPI01G02400 vs. NCBI nr
Match: XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 878.6 bits (2269), Expect = 2.5e-251
Identity = 426/505 (84.36%), Postives = 459/505 (90.89%), Query Frame = 0


Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKPATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLA SLCS V+I F +FQLL+P+FIWSS  K  T+ IPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQ+HA  IR GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIAADNFTFSFLLK++GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYG LKDV +ARNLFDE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGSLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  N+RGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAE++ TPDGVT
Sbjct: 301 YAKCGAVEEAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]

BLAST of CSPI01G02400 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-98
Identity = 191/466 (40.99%), Postives = 285/466 (61.16%), Query Frame = 0


Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQ---NLFVIGKLIDFCAVSDHGDMNYAVVVF 115
           Q+   L + CS +  L QLHA  +R  + +    LF+ GK++     S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 116 DRIENADGFLWNTMIRGFGRN-RKLLMAFEFYKRMLEKGIAA-DNFTFSFLLKMTGQLGS 175
           D IEN   F+WNT+IR    +  +   AF  Y++MLE+G ++ D  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDC 235
              GKQ+H  I+K G    VYV N LIH+YG    +++AR +FDE+P+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN---NR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+ +      + 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAERVET-PDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ +R    P+ VTF+ +L ACN+ G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG-NVELGERVSSHVLEIVADHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL AC   G +VEL E ++ +++    D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G+ K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

[Close]

BLAST of CSPI01G02400 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 347.1 bits (889), Expect = 2.5e-95
Identity = 182/451 (40.35%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVS-DHGDMNYAVVVFDR 115
           Q  + L  +C++L++L Q+ A  I+   +   FV  KLI+FC  S     M+YA  +F+ 
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89

Query: 116 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLG 175
           +   D  ++N+M RG+ R    L  F  +  +LE GI  DN+TF  LLK      ++  G
Sbjct: 90  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149

Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSC 235
           +QLH   +KLGLD +VYV  TLI+MY   +DV+ AR +FD + +  +V +NA+I  +   
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209

Query: 236 GMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVF 295
              NEAL LF +M    ++P+E TL+  +S+C+ LG+LD G+W+H +   ++  K + V 
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269

Query: 296 NSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVE 355
            +LIDM+AKCG+++ A  +F  +  K+   W+ MI+  A HG AE ++ +F  M +E V+
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 329

Query: 356 TPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAY 415
            PD +TFL +L AC++ G+VEEGR+YF  M   F I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 -PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389

Query: 416 QLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSG 475
           + I  +P+    ++WR LLAAC  H N++L E+VS  + E+   H  DYV+L+N+YA + 
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449

Query: 476 QWNEMIKTRKSM-HRKGVEKPEPGNSYLEIN 505
           +W  +   RK M  RK V+   PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476

[Close]

BLAST of CSPI01G02400 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 4.2e-95
Identity = 179/442 (40.50%), Postives = 276/442 (62.44%), Query Frame = 0


Query: 66  STLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVS--DHGDMNYAVVVFDRIEN-ADGFL 125
           S++  L Q+HA  IR G   +   +GK + F  VS      M+YA  VF +IE   + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 126 WNTMIRGFGRNRKLLMAFEFYKRMLEKG-IAADNFTFSFLLKMTGQLGSIMLGKQLHVNI 185
           WNT+IRG+      + AF  Y+ M   G +  D  T+ FL+K    +  + LG+ +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 186 LKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEAL 245
           ++ G  S +YV+N+L+H+Y    DV  A  +FD++P+ DLVAWN+VI+     G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 246 DLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDMY 305
            L+ +M   G++PD  T+V  +SAC+ +GAL  G+ VH ++      + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 306 AKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTF 365
           A+CG VE A+ +F+ +  KN V+W ++I+GLA +G  ++A+ LF  M +     P  +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 366 LAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 425
           + +L AC++ G V+EG  YF  M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 426 MECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIK 485
           M+ N VIWRTLL AC +HG+ +L E     +L++  +HS DYVLL+NMYAS  +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 486 TRKSMHRKGVEKPEPGNSYLEI 504
            RK M R GV+K  PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

[Close]

BLAST of CSPI01G02400 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-93
Identity = 168/482 (34.85%), Postives = 284/482 (58.92%), Query Frame = 0


Query: 55  EQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDR 114
           E  F+   ++  +  +  +++ASII  G  Q+ F++ K++DFC   +  DM+YA  +F++
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 115 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGI-AADNFTFSFLLKMTGQLGSIML 174
           + N + FL+N++IR +  N         YK++L K     D FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWN-------- 234
           GKQ+H ++ K G   HV   N LI MY +  D+  A  +FDE+ + D+++WN        
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 235 -----------------------AVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVT 294
                                  A+I  +   G Y EA+D F +M  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 295 ISACSALGALDCGRWVHSHVNSNNRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNI 354
           + +C+ LG+L+ G+W+H +       K   V N+LI+MY+KCG +  A ++F  + GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 355 VTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFD 414
           ++W+TMI G A HG+A  A+  F+ M   +V+ P+G+TFL +L AC++ G  +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 415 LMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNV 474
           +M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM+ ++ IW +LL++C+  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 475 ELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLE 505
           ++      H++E+  +   +YVLLAN+YA  G+W ++ + RK +  + ++K  PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

[Close]

BLAST of CSPI01G02400 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-92
Identity = 181/489 (37.01%), Postives = 282/489 (57.67%), Query Frame = 0


Query: 50  GYFAKEQKFMFLFKQCS---TLKDLNQLHASIIRLGFDQNLFV----------IGKLIDF 109
           G       F F+ K C+     K+  Q+H  +++LG D +L+V           G+L D 
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188

Query: 110 CAVSD-------------------HGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLL 169
             V D                    G +  A  +FD I   D   WN MI G+       
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248

Query: 170 MAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLI 229
            A E +K M++  +  D  T   ++    Q GSI LG+Q+H+ I   G  S++ + N LI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308

Query: 230 HMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEA 289
            +Y +  ++  A  LF+ LP  D+++WN +I  +    +Y EAL LF +ML+SG  P++ 
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368

Query: 290 TLVVTISACSALGALDCGRWVHSHVNSNNRGKTIA--VFNSLIDMYAKCGAVEYAREMFN 349
           T++  + AC+ LGA+D GRW+H +++   +G T A  +  SLIDMYAKCG +E A ++FN
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428

Query: 350 AVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVE 409
           ++  K++ +WN MI G A HG A+ +  LFS M    ++ PD +TF+ +L AC++ G ++
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLD 488

Query: 410 EGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAA 469
            GR  F  MT+ + + P L+HYG M+D+LG +G  +EA ++I  M ME + VIW +LL A
Sbjct: 489 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 548

Query: 470 CQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPE 505
           C+MHGNVELGE  + ++++I  ++   YVLL+N+YAS+G+WNE+ KTR  ++ KG++K  
Sbjct: 549 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-V 608

The following BLAST results are available for this feature:

BLAST of CSPI01G02400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WQW5	2.0e-97	40.99	Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
Q8LK93	3.5e-94	40.35	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]
A8MQA3	5.9e-94	40.50	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	2.5e-92	34.85	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	2.1e-91	37.01	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]

BLAST of CSPI01G02400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUI8	2.8e-296	99.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1	[more]
A0A5A7UQ05	3.8e-277	93.08	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BWU9	3.8e-277	93.08	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A6J1JI60	1.2e-251	84.36	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A6J1E6Y6	6.7e-250	84.36	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]

BLAST of CSPI01G02400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138302.1	5.8e-296	99.60	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
XP_008453215.2	7.8e-277	93.08	PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/...	[more]
XP_038880037.1	5.8e-256	86.36	pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida]	[more]
XP_022987183.1	2.5e-251	84.36	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
XP_023516362.1	2.5e-251	84.36	pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp...	[more]

BLAST of CSPI01G02400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59720.1	1.4e-98	40.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02980.1	2.5e-95	40.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	4.2e-95	40.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	1.8e-93	34.85	mitochondrial editing factor 21	[more]
AT1G08070.1	1.5e-92	37.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 121..163 e-value: 2.7E-10 score: 40.3 coord: 320..368 e-value: 2.4E-9 score: 37.2 coord: 220..266 e-value: 3.7E-11 score: 43.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 122..154 e-value: 6.8E-8 score: 30.2 coord: 222..256 e-value: 2.8E-9 score: 34.6 coord: 323..356 e-value: 4.7E-6 score: 24.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 463..491 e-value: 0.39 score: 11.1 coord: 293..316 e-value: 0.0024 score: 18.0 coord: 397..421 e-value: 0.0023 score: 18.0 coord: 194..217 e-value: 0.15 score: 12.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 119..153 score: 11.421732
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 12.594591
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..355 score: 10.731171
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..175 e-value: 5.9E-16 score: 60.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 276..347 e-value: 2.8E-8 score: 35.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 176..275 e-value: 1.8E-21 score: 78.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 348..495 e-value: 1.2E-23 score: 86.0
None	No IPR available	PANTHER	PTHR47926:SF177	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 46..504
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 46..504

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G02400.1	CSPI01G02400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding