CSPI01G02250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G02250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	mini zinc finger
Location	Chr1: 1468015 .. 1468866 (+)
RNA-Seq Expression	CSPI01G02250
Synteny	CSPI01G02250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCAAAATAAGCTTGTGTGTTTCTGTTCTATCTTCCTTATTAATTTTCTCCTCTCTCTTTCCATTAATCTAAACCCATATATAAATAAACTCTCTCTTAGGGTTAGGGTTATGTTGTTAGTTCTCCTTTGCTGAGAATTCCCTAAAGAACAAAAAAAAGAGAGAAAGCTTTCTCCTTTTTTCCCTTTGTAAATTTGAACAACCACCAAAATCAGCAAAGATTGGTGGGTTTAGAGCTTTAGGGGATTCCAAAACCATGAAGAAAAGGCTGGTGGTGGTGAGGAAATCTGATGGCTCTAACGGGCGACGAAACCACCACTGGTCCAGTTCGGGATCGGAGGTGCGGTACGCAGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGATGCCGAGAATTCATGGCAAGAGGAGAGGATGGGACTGAGGAGGCTCTGAATTGTGCTGCTTGTGGTTGCCACAGGAATTTTCATAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAATTAATTTTTATTTAATTGAAAGGATCATCAAATCATCAATCATCATCATAAAAACTTCAAATTGACTAAAAGGGTTTGTGTTTTATGTATAATGTTTTCTATGGTCTGGTTTTTCTTTGATTTTTAGTTTTGCATTTTGATCATGTAAATCTGATCATCAGTAACCAAACATTATATGATGGATTATTGGAGAAGGAAAAATTAGAAAGAAAAAGAAAAAACAAATATTAATAATTTGATTTTCAGTTTTTGTTTTTTTGGTTCTTGCTTTTCTTCAAGAATATATTGATTCAAGGGTTTCTCTCTTTATTA

mRNA sequence

TGCCAAAATAAGCTTGTGTGTTTCTGTTCTATCTTCCTTATTAATTTTCTCCTCTCTCTTTCCATTAATCTAAACCCATATATAAATAAACTCTCTCTTAGGGTTAGGGTTATGTTGTTAGTTCTCCTTTGCTGAGAATTCCCTAAAGAACAAAAAAAAGAGAGAAAGCTTTCTCCTTTTTTCCCTTTGTAAATTTGAACAACCACCAAAATCAGCAAAGATTGGTGGGTTTAGAGCTTTAGGGGATTCCAAAACCATGAAGAAAAGGCTGGTGGTGGTGAGGAAATCTGATGGCTCTAACGGGCGACGAAACCACCACTGGTCCAGTTCGGGATCGGAGGTGCGGTACGCAGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGATGCCGAGAATTCATGGCAAGAGGAGAGGATGGGACTGAGGAGGCTCTGAATTGTGCTGCTTGTGGTTGCCACAGGAATTTTCATAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAATTAATTTTTATTTAATTGAAAGGATCATCAAATCATCAATCATCATCATAAAAACTTCAAATTGACTAAAAGGGTTTGTGTTTTATGTATAATGTTTTCTATGGTCTGGTTTTTCTTTGATTTTTAGTTTTGCATTTTGATCATGTAAATCTGATCATCAGTAACCAAACATTATATGATGGATTATTGGAGAAGGAAAAATTAGAAAGAAAAAGAAAAAACAAATATTAATAATTTGATTTTCAGTTTTTGTTTTTTTGGTTCTTGCTTTTCTTCAAGAATATATTGATTCAAGGGTTTCTCTCTTTATTA

Coding sequence (CDS)

ATGAAGAAAAGGCTGGTGGTGGTGAGGAAATCTGATGGCTCTAACGGGCGACGAAACCACCACTGGTCCAGTTCGGGATCGGAGGTGCGGTACGCAGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGATGCCGAGAATTCATGGCAAGAGGAGAGGATGGGACTGAGGAGGCTCTGAATTGTGCTGCTTGTGGTTGCCACAGGAATTTTCATAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAATTAA

Protein sequence

MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN*

Homology

[Close]

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-29
Identity = 65/102 (63.73%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCRE 60
           MKKR +V+ K    N   +  W     SSS SE   VRY ECQKNHAA +GG+AVDGCRE
Sbjct: 2   MKKRQMVI-KQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCRE 61

Query: 61  FMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS 95
           FMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPPN+
Sbjct: 62  FMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA 102

[Close]

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-29
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR VV+++   S     +  +SS S VRY ECQKNHAA +GG+AVDGCREFMA G D 
Sbjct: 1  MKKRQVVIKQRKSS-----YTMTSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD- 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
            +AL CAACGCHRNFHRREVD EVV EYSPPN+N
Sbjct: 61 --DALTCAACGCHRNFHRREVDTEVVCEYSPPNAN 87

[Close]

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RG 60
          M+KR VV+R++      R+   +SS +   VRY ECQKNHAA +GG+AVDGCREFMA RG
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 EDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS 95
          E+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Sbjct: 61 EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPS 97

[Close]

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 29 VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA 84
          VRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Sbjct: 33 VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEA 87

[Close]

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 29 VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA 84
          VRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Sbjct: 33 VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEA 87

[Close]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL
Match: A0A0A0LSA6 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009710 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 95

[Close]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL
Match: A0A5A7UWS7 (Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002440 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60
          MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED
Sbjct: 1  MKKRLVVVKKSDGSNGRRNHHWSASSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60

Query: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96

[Close]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL
Match: A0A1S3BWG1 (mini zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103493991 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60
          MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED
Sbjct: 1  MKKRLVVVKKSDGSNGRRNHHWSASSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60

Query: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96

[Close]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Sbjct: 61 TEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD 93

[Close]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 82/95 (86.32%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEAL+CAACGCHRNFHRR+VDAEVVFEYSPPNS+
Sbjct: 61 TEEALSCAACGCHRNFHRRDVDAEVVFEYSPPNSD 93

[Close]

BLAST of CSPI01G02250 vs. NCBI nr
Match: XP_004138166.1 (mini zinc finger protein 3 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 4.0e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 95

[Close]

BLAST of CSPI01G02250 vs. NCBI nr
Match: XP_008453204.1 (PREDICTED: mini zinc finger protein 3-like [Cucumis melo] >KAA0057941.1 mini zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.2e-47
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60
          MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED
Sbjct: 1  MKKRLVVVKKSDGSNGRRNHHWSASSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60

Query: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96

[Close]

BLAST of CSPI01G02250 vs. NCBI nr
Match: XP_038880256.1 (mini zinc finger protein 3 [Benincasa hispida])

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-45
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVV+KSDGS+GRRNH+ SSSGS VRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVKKSDGSSGRRNHNRSSSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 95

[Close]

BLAST of CSPI01G02250 vs. NCBI nr
Match: KAE8652416.1 (hypothetical protein Csa_013396 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 5.6e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVV 87
          TEEALNCAACGCHRNFHRREVDAEVV
Sbjct: 61 TEEALNCAACGCHRNFHRREVDAEVV 86

[Close]

BLAST of CSPI01G02250 vs. NCBI nr
Match: XP_022921765.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
          TEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Sbjct: 61 TEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD 93

[Close]

BLAST of CSPI01G02250 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 )

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-30
Identity = 65/102 (63.73%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCRE 60
           MKKR +V+ K    N   +  W     SSS SE   VRY ECQKNHAA +GG+AVDGCRE
Sbjct: 2   MKKRQMVI-KQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCRE 61

Query: 61  FMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS 95
           FMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPPN+
Sbjct: 62  FMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA 102

[Close]

BLAST of CSPI01G02250 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger )

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-30
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR VV+++   S     +  +SS S VRY ECQKNHAA +GG+AVDGCREFMA G D 
Sbjct: 1  MKKRQVVIKQRKSS-----YTMTSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD- 60

Query: 61 TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96
            +AL CAACGCHRNFHRREVD EVV EYSPPN+N
Sbjct: 61 --DALTCAACGCHRNFHRREVDTEVVCEYSPPNAN 87

[Close]

BLAST of CSPI01G02250 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RG 60
          M+KR VV+R++      R+   +SS +   VRY ECQKNHAA +GG+AVDGCREFMA RG
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 EDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS 95
          E+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Sbjct: 61 EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPS 97

[Close]

BLAST of CSPI01G02250 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 94.7 bits (234), Expect = 4.2e-20
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 26  GSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA 84
           G+++RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E ++
Sbjct: 44  GAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

[Close]

BLAST of CSPI01G02250 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 23  SSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVD 82
           ++S  + RY ECQKNHAA  GG  VDGC EFM+ GE+GT E+L CAAC CHR+FHR+E+D
Sbjct: 74  TTSPGKARYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEID 133

Query: 83  AEVVFEYS 91
              V  ++
Sbjct: 134 GLFVVNFN 141

The following BLAST results are available for this feature:

BLAST of CSPI01G02250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA51	2.8e-29	63.73	Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1	[more]
Q2Q493	3.7e-29	66.32	Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1	[more]
Q9LJW5	1.6e-24	58.76	Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1	[more]
B8BIU8	1.6e-19	76.36	Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 S...	[more]
Q2RB28	1.6e-19	76.36	Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3...	[more]

BLAST of CSPI01G02250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSA6	2.0e-49	100.00	ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A5A7UWS7	1.1e-47	97.92	Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3BWG1	1.1e-47	97.92	mini zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103493991 PE=4 SV=...	[more]
A0A6J1E6Q9	1.1e-39	87.37	mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE...	[more]
A0A6J1J9R5	2.4e-39	86.32	mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4...	[more]

BLAST of CSPI01G02250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138166.1	4.0e-49	100.00	mini zinc finger protein 3 [Cucumis sativus]	[more]
XP_008453204.1	2.2e-47	97.92	PREDICTED: mini zinc finger protein 3-like [Cucumis melo] >KAA0057941.1 mini zin...	[more]
XP_038880256.1	6.0e-45	94.74	mini zinc finger protein 3 [Benincasa hispida]	[more]
KAE8652416.1	5.6e-43	100.00	hypothetical protein Csa_013396 [Cucumis sativus]	[more]
XP_022921765.1	2.2e-39	87.37	mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc fin...	[more]

BLAST of CSPI01G02250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74660.1	2.0e-30	63.73	mini zinc finger 1	[more]
AT1G18835.1	2.6e-30	66.32	mini zinc finger	[more]
AT3G28917.1	1.1e-25	58.76	mini zinc finger 2	[more]
AT4G24660.1	4.2e-20	67.24	homeobox protein 22	[more]
AT2G18350.1	3.5e-19	57.35	homeobox protein 24	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 30..81 e-value: 8.1E-27 score: 91.4
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 29..81 e-value: 1.6E-29 score: 102.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 31..80 score: 25.362278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 20..93
None	No IPR available	PANTHER	PTHR31948:SF107	MINI ZINC FINGER PROTEIN 3	coord: 20..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G02250.1	CSPI01G02250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding