CSPI01G01760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G01760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative
Location	Chr1: 1166252 .. 1166800 (+)
RNA-Seq Expression	CSPI01G01760
Synteny	CSPI01G01760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCATTCTTCCCTCTCTTTGAATCACTTCTCACGCTCTATAAATAAATACCCATTCCCTCTCACATTCTTTCATCCTTTCATTTCTTCTTCTTCATCTTCAATCCAAATCCATGGCTGCAGGCAACAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAGCGACTCCACCGACGTAGTCTCGGATAACAAGAAGAAGACCGGCGGTGGAAATAGTTCGGCCAAGTATAAGCAGAAGGTTGGGGAAGGGCTTGGCAAGACCAAATCTGTGGCTTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCCCTTGGTTTCCAATGGATTAAAGAGAAATATAATAAAACTGCTCATAAGAAGTAGAATATTCATCCATTCTTTTTAATTAGTTTCTCTCTCTAGATCTCTGTAGCTGCTTTCATTTTGATTATTATCTTTGAGTTCTCTGTATCTTTTTTCTGTTTGGTTATACAGATGCATATATATGTATGTACACAATAGATTGTTATTATTCTTTTGTTAATATGATTTCATTTTATCTCTGT

mRNA sequence

CCTCATTCTTCCCTCTCTTTGAATCACTTCTCACGCTCTATAAATAAATACCCATTCCCTCTCACATTCTTTCATCCTTTCATTTCTTCTTCTTCATCTTCAATCCAAATCCATGGCTGCAGGCAACAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAGCGACTCCACCGACGTAGTCTCGGATAACAAGAAGAAGACCGGCGGTGGAAATAGTTCGGCCAAGTATAAGCAGAAGGTTGGGGAAGGGCTTGGCAAGACCAAATCTGTGGCTTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCCCTTGGTTTCCAATGGATTAAAGAGAAATATAATAAAACTGCTCATAAGAAGTAGAATATTCATCCATTCTTTTTAATTAGTTTCTCTCTCTAGATCTCTGTAGCTGCTTTCATTTTGATTATTATCTTTGAGTTCTCTGTATCTTTTTTCTGTTTGGTTATACAGATGCATATATATGTATGTACACAATAGATTGTTATTATTCTTTTGTTAATATGATTTCATTTTATCTCTGT

Coding sequence (CDS)

ATGGCTGCAGGCAACAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAGCGACTCCACCGACGTAGTCTCGGATAACAAGAAGAAGACCGGCGGTGGAAATAGTTCGGCCAAGTATAAGCAGAAGGTTGGGGAAGGGCTTGGCAAGACCAAATCTGTGGCTTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCCCTTGGTTTCCAATGGATTAAAGAGAAATATAATAAAACTGCTCATAAGAAGTAG

Protein sequence

MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEGTSLGFQWIKEKYNKTAHKK*

Homology

[Close]

BLAST of CSPI01G01760 vs. ExPASy TrEMBL
Match: A0A0A0LUC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60
          MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSLGFQWIKEKYNKTAHKK 85
          KVKEGTSLGFQWIKEKYNKTAHKK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHKK 84

[Close]

BLAST of CSPI01G01760 vs. ExPASy TrEMBL
Match: A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKT--GGGNSSAKYKQKVGEGLGKTKSVASNG 60
          MAAGNN+SYDWADQWDY+DS DVV++NKKK    GGNSSAKYKQKVGEGLGKTK+VASNG
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSLGFQWIKEKYNKTAHKK 85
          VKKVKEGTSLGFQWIK+KYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of CSPI01G01760 vs. ExPASy TrEMBL
Match: A0A1S3BW93 (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKT--GGGNSSAKYKQKVGEGLGKTKSVASNG 60
          MAAGNN+SYDWADQWDY+DS DVV++NKKK    GGNSSAKYKQKVGEGLGKTK+VASNG
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSLGFQWIKEKYNKTAHKK 85
          VKKVKEGTSLGFQWIK+KYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of CSPI01G01760 vs. ExPASy TrEMBL
Match: A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.0e-30
Identity = 67/79 (84.81%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 6  NTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEG 65
          N SYDWADQWDYSDS DVV++N KK+GGGN++ KYKQKVGEGLGKTK+VASNGVKKVK+G
Sbjct: 4  NGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVKQG 63

Query: 66 TSLGFQWIKEKYNKTAHKK 85
          TSLGFQWIK+KYNKTAHKK
Sbjct: 64 TSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of CSPI01G01760 vs. ExPASy TrEMBL
Match: A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0


Query: 6   NTSYDWADQWDYSDSTDVVSDNKKKT-GGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKE 65
           N SYDWADQWDYSDS DVV++ KKK+ GGGN++ KYKQKVGEGLGKTK+VASNGVKKVKE
Sbjct: 42  NGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVKE 101

Query: 66  GTSLGFQWIKEKYNKTAHKK 85
           GTSLGFQWIK+KYNKTAHKK
Sbjct: 102 GTSLGFQWIKDKYNKTAHKK 121

[Close]

BLAST of CSPI01G01760 vs. NCBI nr
Match: XP_011659007.1 (uncharacterized protein LOC105436119 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60
          MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSLGFQWIKEKYNKTAHKK 85
          KVKEGTSLGFQWIKEKYNKTAHKK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHKK 84

[Close]

BLAST of CSPI01G01760 vs. NCBI nr
Match: KGN63621.2 (hypothetical protein Csa_013074 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 6.3e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60
          MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK
Sbjct: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVK 60

Query: 61 KVKEGTSLGFQWIKEKYNKTAHK 84
          KVKEGTSLGFQWIKEKYNKTAHK
Sbjct: 61 KVKEGTSLGFQWIKEKYNKTAHK 83

[Close]

BLAST of CSPI01G01760 vs. NCBI nr
Match: XP_008453134.1 (PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo] >KAA0057896.1 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Cucumis melo var. makuwa] >TYJ98584.1 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MAAGNNTSYDWADQWDYSDSTDVVSDNKKKT--GGGNSSAKYKQKVGEGLGKTKSVASNG 60
          MAAGNN+SYDWADQWDY+DS DVV++NKKK    GGNSSAKYKQKVGEGLGKTK+VASNG
Sbjct: 1  MAAGNNSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNG 60

Query: 61 VKKVKEGTSLGFQWIKEKYNKTAHKK 85
          VKKVKEGTSLGFQWIK+KYNKTAHKK
Sbjct: 61 VKKVKEGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of CSPI01G01760 vs. NCBI nr
Match: XP_038879790.1 (uncharacterized protein LOC120071534 [Benincasa hispida])

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 70/79 (88.61%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 6  NTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEG 65
          N SYDWADQWDY+DSTDVV++NKKK+GGGNS+AKYKQKVGEGLGKTK+VASNGVK+VKEG
Sbjct: 4  NGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRVKEG 63

Query: 66 TSLGFQWIKEKYNKTAHKK 85
          TSLGFQWIK+KYNKTAHKK
Sbjct: 64 TSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of CSPI01G01760 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-30
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 8   SYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEGTS 67
           SYDWADQWDYSDS DVV++NKKK+GGGN++ KYKQKVGEGLGKTK+VASNGVKKVKEGTS
Sbjct: 44  SYDWADQWDYSDSKDVVTENKKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKVKEGTS 103

Query: 68  LGFQWIKEKYNKTAHKK 85
           LGFQWIK+KYNKTAHKK
Sbjct: 104 LGFQWIKDKYNKTAHKK 120

[Close]

BLAST of CSPI01G01760 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-15
Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 11 WADQWDYSDSTDVVSDNKKKTG--GGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEGTSL 70
          WA+QWD +      S  K   G  GG +S+KYK+KVG GLGKTK+ AS+G+KKVK GTSL
Sbjct: 6  WAEQWDSNQQ----SSGKTTHGGEGGGASSKYKEKVGAGLGKTKAAASSGLKKVKIGTSL 65

Query: 71 GFQWIKEKYNKTAHK 84
          G  W+K+KYNKT  K
Sbjct: 66 GLNWVKDKYNKTTTK 76

[Close]

BLAST of CSPI01G01760 vs. TAIR 10
Match: AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-13
Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 5  NNTSYDWADQWDYSDST-------DVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASN 64
          N TS  WADQWD S  +                +G  +++ KYK+K+G+GL KTK+VAS+
Sbjct: 2  NGTS--WADQWDNSGDSAKGGRIGSGAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASS 61

Query: 65 GVKKVKEGTSLGFQWIKEKYNKTAHKK 85
          G KK+K G+++GF+W+K+KY+KT HK+
Sbjct: 62 GFKKLKTGSAIGFRWVKDKYHKTTHKQ 86

The following BLAST results are available for this feature:

BLAST of CSPI01G01760 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G01760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUC7	1.1e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1	[more]
A0A5A7UUQ6	8.6e-33	87.21	Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=C...	[more]
A0A1S3BW93	8.6e-33	87.21	uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=...	[more]
A0A6J1E6S2	4.0e-30	84.81	uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JCZ5	4.4e-29	85.00	uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668...	[more]

BLAST of CSPI01G01760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659007.1	2.2e-38	100.00	uncharacterized protein LOC105436119 [Cucumis sativus]	[more]
KGN63621.2	6.3e-38	100.00	hypothetical protein Csa_013074 [Cucumis sativus]	[more]
XP_008453134.1	1.8e-32	87.21	PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo] >KAA0057896.1 put...	[more]
XP_038879790.1	1.2e-31	88.61	uncharacterized protein LOC120071534 [Benincasa hispida]	[more]
XP_023516550.1	2.2e-30	88.31	uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI01G01760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48180.1	2.8e-15	57.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19020.1	1.5e-13	44.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38
None	No IPR available	PANTHER	PTHR33386:SF5	OS02G0740600 PROTEIN	coord: 5..82
None	No IPR available	PANTHER	PTHR33386	OS02G0740600 PROTEIN	coord: 5..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G01760.1	CSPI01G01760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030639	polyketide biosynthetic process
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups