CSPI01G01670 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G01670
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LIM domain-containing protein WLIM1-like
Location	Chr1: 1116242 .. 1118634 (-)
RNA-Seq Expression	CSPI01G01670
Synteny	CSPI01G01670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGGCTTTCTTAGGGACAACCCAAAAGTGCAAAGCTTGTGACAAGACTGTTTATTTGGTTGATCAGCTTACTGCTGATAACAAAGTTTATCATAAGGCTTGTTTCAGATGCCACCATTGCAAGAGCACTCTAAAGGTATCTCTTTTTTTATTAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTATAAACAGATATGTTTCATTCTTAATGGTTTCTCATGTTAAGAAATCTACAATCAAAGGTAAACAGAAGCAACGTAAAAGAAAACAAATAATCAATACATGATTCACAAATAGAGAGGGAGTGAACGGTTTGTTTGTTATTAGAGAGAAAATATTGAGATATCAGATTTAAAGGGAAAATTAGAGTTTCAGAGTTTACATAAGGCACCCCTCTAACCAACGTTCTTGGTTATCTAGAGTGCTACATAACAGATTCAAAACATTCTAACGTCTTCAATGCTTGTTGATTGAGATTGAAAGTTGAATGAATAAGAACCCTTATTGATTTCTGATTATTTGTTCAATTCTGACCATATAGATTTTTTGAATAGATTATATTGATGTATGCCTGCTCAAGATATCAAGATTGTGTCTCAAACTGATGTAAAATGATCCTATTTTCCATTTTATCTATGACTAATGAAAACACCGTTGTTGGAATGCTTCAAGTACTGTAATTTGGCTAAAATTTTCCTGGAGAGGATTTCATAATGATCTTAAATGGTTCCCATATCTCATAAGGGTCTGATTTCTCGAGTCTGTAATTGTGAAGCTTCTCCGACAAGGAATTTTGCTAACTAAGATTTCGTGTGTATTAAGATCACGTTTGTTGGTGCATTAGAACTCAAAGACACAGTTGTACAACCTATAGAAGTAGAACTGTTTTTGTTCAAGTAAGGTCATAGTTTGTCTCTTGAGTTCAATAACACGAGAGACTTAACATGAGAGATTAGAGATTTGAATCTTCAACTAGTTGAACTATATTTAGGTTGACTTGGAATCTGTAACTTGAAACATCACCACCATCACCAATATCAATTATTATTATTAATTTCATTTTTATTTTCCTGTTGCTCCAGTTGTTCAATTACTCCTCCTTTGAGGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTAGAAAAAAGCTTTGAAGGTAATTGGCTGTTTGTTCAATCATTTGCAATGGCTTCTGCTTGTTCAGTCTATAAATATTCTTCTTTCTTCTCTTTTAGCTACTCCAAGAACTGTTAGAACAGACAGATCTACCAATCAGGTTTTTTTTTTCTTTGCTTTATTCGTTTTTTCCAAGTTTTATCTTTTAAAATCAATACTTATGATCTGGTATCTAACAACATGATATTGTTATTAAAACGTGAAAGTTAAATTTGATTTATGTTTGAAGGTCCAAACCAACAGCAAATTGTCAAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTAAATGTTCATTGTGCCGTTTAAATGTCTGTAAGCATTTACTTGCTTCCAATGCTTATGTTATGAATCAGTGTAATAATTTCCATATAGCTAAATTCAACTTGGGACAATATGATACATTTGGAAATTACAAATTGGGAAGGGTGGTTGAATGTTGGCTTAGAATAGCTTTCTTTTCGTCTGTTTGTGTATTGCATGCCAGAGAAAGAGGAGTGTGATCCTGATAGACCCCCACAAAGAAAAATAAGAAAGGTTTCGATTATTTGTCGAAAGTATACAAATACAAGTAGAGATAGTTCATGAGGTCTGTTCCTGTACAAGTTCACAAAAGGACTCCATCAACACATTTACTTCAAACTCTCCCAAACTATTTTACTTTTCACCTTTTTCGCTCTCTTTCCATTGTTAGTCAAACTAACGAATAAGTCTTTGATCCCATCAAGTATCAAAATCCTATAAACATATATTTGTCTCCTCAATCTAAGACATTGTAATCTCTCAATTTCCTTTACGAGATTTGGGGTATTTTACTCCTCAATGTTGCTAAAACAAGTCTTGAGTCTTTGAACTTCTGACCTTTTGATCGAGGACGTAATGCTTGAATCAGTAAGGCACTATTCAAATTTCACTAAAACTAGTTTGCTAAATTGAAAACTTGCTGTTGTCTTTCTTCCTTCAGGTGGCAGTTGACAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGGTGTGTGATTAGCCCATCGAACTACGTAGCGCACGAACATCGACTCTACTGCAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGAAGTGAC

mRNA sequence

ATGAAGATGGCTTTCTTAGGGACAACCCAAAAGTGCAAAGCTTGTGACAAGACTGTTTATTTGGTTGATCAGCTTACTGCTGATAACAAAGTTTATCATAAGGCTTGTTTCAGATGCCACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAGGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTAGAAAAAAGCTTTGAAGCTACTCCAAGAACTGTTAGAACAGACAGATCTACCAATCAGGTCCAAACCAACAGCAAATTGTCAAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTTGACAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGGTGTGTGATTAGCCCATCGAACTACGTAGCGCACGAACATCGACTCTACTGCAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGAAGTGAC

Coding sequence (CDS)

ATGAAGATGGCTTTCTTAGGGACAACCCAAAAGTGCAAAGCTTGTGACAAGACTGTTTATTTGGTTGATCAGCTTACTGCTGATAACAAAGTTTATCATAAGGCTTGTTTCAGATGCCACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAGGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTAGAAAAAAGCTTTGAAGCTACTCCAAGAACTGTTAGAACAGACAGATCTACCAATCAGGTCCAAACCAACAGCAAATTGTCAAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTTGACAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGGTGTGTGATTAGCCCATCGAACTACGTAGCGCACGAACATCGACTCTACTGCAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGAAGTGAC

Protein sequence

MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD

Homology

[Close]

BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.0e-72
Identity = 125/185 (67.57%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           MAF GTTQKC ACDKTVYLVD+LTADN+VYHKACFRCHHCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRS-TNQVQTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HFDQ FK TGSLEKSFE TP+  + DR    +    +K+S++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV+V+   YH++CF+C+HGGC ISPSNY+AHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 183 IKGSD 187
               D
Sbjct: 181 NAAKD 185

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BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 9.2e-69
Identity = 116/179 (64.80%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   AFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPH 63
           +F GTTQKC  C+KTVYLVD+L A+ +VYHKACFRCHHC STLKL N++SF+GV+YC+ H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 64  FDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIEK 123
           FDQLFK TGSLEKSF+ TP+       + + Q+ ++LSS F GT+DKC  C K VYPIE+
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKFKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIER 122

Query: 124 VAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 183
           V VD  +YHRACF+C HGGC ISPSNY+AHE RLYC+HHH QLFK+KGN+SQL+  E +
Sbjct: 123 VKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

[Close]

BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.2e-61
Identity = 110/182 (60.44%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKC+AC+KTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F+ +P    TD+ T ++ +T S+L+ +F+GTQDKC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IK 184
           IK
Sbjct: 181 IK 181

[Close]

BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-60
Identity = 109/184 (59.24%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F++  ++   D+ST ++ +T S+++  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IKGS 186
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55
Identity = 98/174 (56.32%), Postives = 128/174 (73.56%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT  KCKACDKTVY++D LT +   YHK+CFRC HCK TL + NYSS +GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIE 122
           HF+QLFK +G+  K+F+A       D  T   +T SKLSS F+GTQDKC TCKKTVYP+E
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLT---RTPSKLSSFFSGTQDKCATCKKTVYPLE 120

Query: 123 KVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQL 177
           KV ++ +SYH+ CFRC+H GC ++ S+Y +    LYC+ H NQLF +KG+++ +
Sbjct: 121 KVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL
Match: A0A0A0LNY7 (Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-105
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EIKGSD 187
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL
Match: A0A1S3BVF2 (LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.1e-104
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFE TPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EIKGSD 187
           EIK SD
Sbjct: 181 EIKVSD 186

[Close]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL
Match: A0A6J1JLG7 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485663 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.9e-102
Identity = 177/184 (96.20%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           MAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIE 122
           HFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 123 KVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 182
           KVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 183 KGSD 187
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL
Match: A0A6J1E4K3 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429864 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.9e-102
Identity = 177/184 (96.20%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           MAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIE 122
           HFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 123 KVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 182
           KVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 183 KGSD 187
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL
Match: A0A6J1BZ78 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111006836 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.8e-100
Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAF GTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFSGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQTNSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQTNSKVSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHR+CFRCSHGGCVISPSNY+AHE RLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRSCFRCSHGGCVISPSNYIAHESRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EI 183
           EI
Sbjct: 181 EI 182

[Close]

BLAST of CSPI01G01670 vs. NCBI nr
Match: XP_004138126.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN63605.1 hypothetical protein Csa_013738 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 2.6e-105
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EIKGSD 187
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of CSPI01G01670 vs. NCBI nr
Match: XP_008453121.1 (PREDICTED: LIM domain-containing protein WLIM1-like [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 8.5e-104
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFE TPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EIKGSD 187
           EIK SD
Sbjct: 181 EIKVSD 186

[Close]

BLAST of CSPI01G01670 vs. NCBI nr
Match: XP_038878600.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTLRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 120

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 181 EIKGSD 187
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of CSPI01G01670 vs. NCBI nr
Match: KAG7023149.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.6 bits (984), Expect = 9.4e-103
Identity = 178/186 (95.70%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60
           +KMAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYC
Sbjct: 41  LKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYC 100

Query: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120
           KPHFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 101 KPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 160

Query: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180
           IEKVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 161 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 220

Query: 181 EIKGSD 187
           EIKGSD
Sbjct: 221 EIKGSD 226

[Close]

BLAST of CSPI01G01670 vs. NCBI nr
Match: XP_022921693.1 (LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LIM domain-containing protein WLIM1-like [Cucurbita maxima] >XP_023516337.1 LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.9 bits (977), Expect = 6.1e-102
Identity = 177/184 (96.20%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           MAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIE 122
           HFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 123 KVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 182
           KVAVDSKSYHRACFRCSHGGCVISPSNY+AHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 183 KGSD 187
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of CSPI01G01670 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 272.3 bits (695), Expect = 2.8e-73
Identity = 125/185 (67.57%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           MAF GTTQKC ACDKTVYLVD+LTADN+VYHKACFRCHHCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRS-TNQVQTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HFDQ FK TGSLEKSFE TP+  + DR    +    +K+S++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV+V+   YH++CF+C+HGGC ISPSNY+AHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 183 IKGSD 187
               D
Sbjct: 181 NAAKD 185

[Close]

BLAST of CSPI01G01670 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 234.6 bits (597), Expect = 6.6e-62
Identity = 110/182 (60.44%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKC+AC+KTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F+ +P    TD+ T ++ +T S+L+ +F+GTQDKC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IK 184
           IK
Sbjct: 181 IK 181

[Close]

BLAST of CSPI01G01670 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.5e-61
Identity = 109/184 (59.24%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F++  ++   D+ST ++ +T S+++  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IKGS 186
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CSPI01G01670 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.5e-61
Identity = 109/184 (59.24%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F++  ++   D+ST ++ +T S+++  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IKGS 186
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CSPI01G01670 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.5e-61
Identity = 109/184 (59.24%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 3   MAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 62
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 63  HFDQLFKMTGSLEKSFEATPRTVRTDRSTNQV-QTNSKLSSLFAGTQDKCVTCKKTVYPI 122
           HF+QLFK +GS  K+F++  ++   D+ST ++ +T S+++  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 123 EKVAVDSKSYHRACFRCSHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 182
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 183 IKGS 186
           IK S
Sbjct: 181 IKRS 182

The following BLAST results are available for this feature:

BLAST of CSPI01G01670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	4.0e-72	67.57	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	9.2e-69	64.80	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	9.2e-61	60.44	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	3.5e-60	59.24	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	2.0e-55	56.32	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of CSPI01G01670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNY7	1.3e-105	99.46	Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1	[more]
A0A1S3BVF2	4.1e-104	98.39	LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931...	[more]
A0A6J1JLG7	2.9e-102	96.20	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1E4K3	2.9e-102	96.20	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1BZ78	2.8e-100	96.15	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CSPI01G01670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138126.1	2.6e-105	99.46	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN63605.1 hypothetical p...	[more]
XP_008453121.1	8.5e-104	98.39	PREDICTED: LIM domain-containing protein WLIM1-like [Cucumis melo]	[more]
XP_038878600.1	1.1e-103	97.31	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
KAG7023149.1	9.4e-103	95.70	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022921693.1	6.1e-102	96.20	LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LI...	[more]

BLAST of CSPI01G01670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	2.8e-73	67.57	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	6.6e-62	60.44	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	2.5e-61	59.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	2.5e-61	59.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	2.5e-61	59.24	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 11..63 e-value: 2.1E-12 score: 57.2 coord: 110..162 e-value: 8.5E-12 score: 55.2
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 111..166 e-value: 2.8E-10 score: 40.3 coord: 12..66 e-value: 1.2E-10 score: 41.5
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 12..46
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 109..169 score: 12.0583
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 10..70 score: 13.1869
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 7..76 e-value: 1.5E-19 score: 71.9 coord: 105..175 e-value: 1.5E-18 score: 68.7
None	No IPR available	PANTHER	PTHR24206:SF63	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 4..183
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 4..183
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 8..69 e-value: 4.39447E-38 score: 123.729
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 111..171 e-value: 2.12132E-36 score: 119.112
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 137..175
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 4..37
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 38..78
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 103..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G01670.1	CSPI01G01670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding