BhiUN66G25 (gene) Wax gourd (B227) v1

Overview
NameBhiUN66G25
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionVQ domain-containing protein
LocationContig66: 685781 .. 686574 (+)
RNA-Seq ExpressionBhiUN66G25
SyntenyBhiUN66G25
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGACCTCCGTCTCAACCTCTCTCTCTAGCTATATATATATATAAAACCAATACATAGTTCAAAAGCAAGAGAGATAAGAAAATCTCTCTATCTCTCTGTGATGGGAAAGTGTGGAGAGAATCAATACAACAACCAAATTAGCCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCAGTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCAACACTCCGACTCGCCAGAGGAACCACAAATTGCCTTCCGACGACGCCCGAACTCCGTCTTCAATGTTTCATGTTGATCATGAAATGGAAGTTTTGAAGTTCTCTGATGACATGAAGTCGCTCCTCCAATTTGATGATCAAGGTTGTTTTGCAACACACAATAATAATAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCCTGTTTTTTTCAATAGAATATATACAAGGTTGTCTTTGTTGGATTGAACTTGGTTGGCAATTAAAGGAAATTTATGCATAAAAATTCTGCAAATTTTCAAGCTTCAAAAGCTACGTTGTAAGTATATATGATTTATGGTCATACATATATTTTTTAAAATTTGAACTTGCTTATTCCAATTAGGATCAATTGTTGTAGATATGTTTGGAAACTATTTGCTTTTTTTGCCTTCCCCCCCTTCATTCTGTTTTCAAACATTAAATTGATATATACACAACTACTTTCACTTGTTTCTTTTTTTCTTTTCTTTTTT

mRNA sequence

CTGACCTCCGTCTCAACCTCTCTCTCTAGCTATATATATATATAAAACCAATACATAGTTCAAAAGCAAGAGAGATAAGAAAATCTCTCTATCTCTCTGTGATGGGAAAGTGTGGAGAGAATCAATACAACAACCAAATTAGCCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCAGTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCAACACTCCGACTCGCCAGAGGAACCACAAATTGCCTTCCGACGACGCCCGAACTCCGTCTTCAATGTTTCATGTTGATCATGAAATGGAAGTTTTGAAGTTCTCTGATGACATGAAGTCGCTCCTCCAATTTGATGATCAAGGTTGTTTTGCAACACACAATAATAATAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCCTGTTTTTTTCAATAGAATATATACAAGGTTGTCTTTGTTGGATTGAACTTGGTTGGCAATTAAAGGAAATTTATGCATAAAAATTCTGCAAATTTTCAAGCTTCAAAAGCTACGTTGTAAGTATATATGATTTATGGTCATACATATATTTTTTAAAATTTGAACTTGCTTATTCCAATTAGGATCAATTGTTGTAGATATGTTTGGAAACTATTTGCTTTTTTTGCCTTCCCCCCCTTCATTCTGTTTTCAAACATTAAATTGATATATACACAACTACTTTCACTTGTTTCTTTTTTTCTTTTCTTTTTT

Coding sequence (CDS)

ATGGGAAAGTGTGGAGAGAATCAATACAACAACCAAATTAGCCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCAGTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCAACACTCCGACTCGCCAGAGGAACCACAAATTGCCTTCCGACGACGCCCGAACTCCGTCTTCAATGTTTCATGTTGATCATGAAATGGAAGTTTTGAAGTTCTCTGATGACATGAAGTCGCTCCTCCAATTTGATGATCAAGGTTGTTTTGCAACACACAATAATAATAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCCTGTTTTTTTCAATAG

Protein sequence

MGKCGENQYNNQISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNTPTRQRNHKLPSDDARTPSSMFHVDHEMEVLKFSDDMKSLLQFDDQGCFATHNNNNILPNNIMGFQSSCFFQ
Homology
BLAST of BhiUN66G25 vs. NCBI nr
Match: KGN60779.1 (hypothetical protein Csa_019238 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 115/139 (82.73%), Postives = 120/139 (86.33%), Query Frame = 0

Query: 1   MGKCGENQYNN-----QISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTG 60
           MGKCGENQY N       SQ+QNPTKVQRKPIKVKYISSPMMIKASNA+EFRAIVQQLTG
Sbjct: 1   MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60

Query: 61  FDSNTPTRQRNHKLPSDDARTPSSMFHVD-HEMEVLKFSDD--MKSLLQFDDQGCFATHN 120
           FDSNTPTR+RN KL SD ARTPS+MFH D HEMEVLKFSDD  M+SLLQFD QGCF T N
Sbjct: 61  FDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGCFETQN 120

Query: 121 NNNILPNNIMGFQSSCFFQ 132
           NNNILPNNIM FQSSCFFQ
Sbjct: 121 NNNILPNNIMEFQSSCFFQ 139

BLAST of BhiUN66G25 vs. NCBI nr
Match: KAG6599333.1 (hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.2 bits (435), Expect = 3.0e-39
Identity = 91/132 (68.94%), Postives = 106/132 (80.30%), Query Frame = 0

Query: 1   MGKCGENQYNNQISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNT 60
           MGKCGEN++ +Q  QSQNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S++
Sbjct: 1   MGKCGENEWKDQ-KQSQNPTKVQRKPIKVKYISSPMMIKASNAHEFRAIVQQLTGFTSHS 60

Query: 61  PTRQRNHKLPSDDARTPS-SMFHVDHEMEVLKFSDDMKSLLQFDDQGCFATHNNNNILPN 120
           PTR+ NHK P   A+TPS S  H + +ME LK SD+M SLL+FDD+ CF T   +N+L N
Sbjct: 61  PTRRSNHKPPPHAAQTPSTSTLHANPQMEALKLSDNMSSLLEFDDEACFVT--LDNVLTN 120

Query: 121 NIMGFQSSCFFQ 132
           N MGFQ+SC FQ
Sbjct: 121 NFMGFQASCLFQ 129

BLAST of BhiUN66G25 vs. NCBI nr
Match: KAA0063578.1 (hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-22
Identity = 62/74 (83.78%), Postives = 65/74 (87.84%), Query Frame = 0

Query: 36  MMIKASNAVEFRAIVQQLTGFDSN-TPTRQRNHKLPSDDARTPSSMFHVDHEMEVLKFSD 95
           MMIKAS+A+EFRAIVQQLTGFDSN TPTR+RN K  SD ARTPSSMFH D EMEVLKFSD
Sbjct: 1   MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSD 60

Query: 96  D-MKSLLQFDDQGC 108
           D M SLLQFDDQGC
Sbjct: 61  DHMASLLQFDDQGC 74

BLAST of BhiUN66G25 vs. NCBI nr
Match: XP_021282108.1 (uncharacterized protein LOC110414990 [Herrania umbratica])

HSP 1 Score: 81.3 bits (199), Expect = 7.0e-12
Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 10  NNQISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNTPTRQRNHKL 69
           +++  +S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          
Sbjct: 25  DHRCHKSKNPTKAKKNPIKIKYISSPMMVKASNADEFRAIVQELTGRNSDVGEPSNVPTT 84

Query: 70  PSDDARTPSSMFHVD------HEMEVL-KFSDDMKSLLQFDDQGCFATHNNNNILPNNIM 129
             ++A    S FHVD       +  +L  F DDM S L+FD+   +        +P N+ 
Sbjct: 85  LPEEANQVHSPFHVDSPPAKVDDKSLLDTFQDDMSS-LEFDEGFLW------RAVPENLF 144

Query: 130 GFQSSCFF 131
           GFQS   F
Sbjct: 145 GFQSPFIF 145

BLAST of BhiUN66G25 vs. NCBI nr
Match: OMO71983.1 (VQ motif-containing protein [Corchorus capsularis])

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-09
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 15  QSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNTPTRQRNH----KLP 74
           +S+NPTKV++ PIKV YI SP M+K SNA EFRAIVQ+LTG +S+T  +  N      +P
Sbjct: 16  KSKNPTKVKKNPIKVTYIDSPTMVKVSNADEFRAIVQELTGRNSDTREQHSNDVHTTTIP 75

Query: 75  SDDA-RTPSSMFHVDHEMEVLKFSDDMKSLLQFDDQGCFATHNNNNILPNNIMGFQSS 128
            ++A +   S   VD  + +  F  DM S L+FD+   +        +  +++GFQSS
Sbjct: 76  KEEANQVHDSSAKVDDRILLDSFPVDMSS-LEFDEDFTWRG------VQEDLLGFQSS 126

BLAST of BhiUN66G25 vs. ExPASy TrEMBL
Match: A0A0A0LIA7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010150 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 115/139 (82.73%), Postives = 120/139 (86.33%), Query Frame = 0

Query: 1   MGKCGENQYNN-----QISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTG 60
           MGKCGENQY N       SQ+QNPTKVQRKPIKVKYISSPMMIKASNA+EFRAIVQQLTG
Sbjct: 1   MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60

Query: 61  FDSNTPTRQRNHKLPSDDARTPSSMFHVD-HEMEVLKFSDD--MKSLLQFDDQGCFATHN 120
           FDSNTPTR+RN KL SD ARTPS+MFH D HEMEVLKFSDD  M+SLLQFD QGCF T N
Sbjct: 61  FDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGCFETQN 120

Query: 121 NNNILPNNIMGFQSSCFFQ 132
           NNNILPNNIM FQSSCFFQ
Sbjct: 121 NNNILPNNIMEFQSSCFFQ 139

BLAST of BhiUN66G25 vs. ExPASy TrEMBL
Match: A0A5A7V7M1 (VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00880 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.6e-22
Identity = 62/74 (83.78%), Postives = 65/74 (87.84%), Query Frame = 0

Query: 36  MMIKASNAVEFRAIVQQLTGFDSN-TPTRQRNHKLPSDDARTPSSMFHVDHEMEVLKFSD 95
           MMIKAS+A+EFRAIVQQLTGFDSN TPTR+RN K  SD ARTPSSMFH D EMEVLKFSD
Sbjct: 1   MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSD 60

Query: 96  D-MKSLLQFDDQGC 108
           D M SLLQFDDQGC
Sbjct: 61  DHMASLLQFDDQGC 74

BLAST of BhiUN66G25 vs. ExPASy TrEMBL
Match: A0A6J1A533 (uncharacterized protein LOC110414990 OS=Herrania umbratica OX=108875 GN=LOC110414990 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-12
Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 10  NNQISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNTPTRQRNHKL 69
           +++  +S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          
Sbjct: 25  DHRCHKSKNPTKAKKNPIKIKYISSPMMVKASNADEFRAIVQELTGRNSDVGEPSNVPTT 84

Query: 70  PSDDARTPSSMFHVD------HEMEVL-KFSDDMKSLLQFDDQGCFATHNNNNILPNNIM 129
             ++A    S FHVD       +  +L  F DDM S L+FD+   +        +P N+ 
Sbjct: 85  LPEEANQVHSPFHVDSPPAKVDDKSLLDTFQDDMSS-LEFDEGFLW------RAVPENLF 144

Query: 130 GFQSSCFF 131
           GFQS   F
Sbjct: 145 GFQSPFIF 145

BLAST of BhiUN66G25 vs. ExPASy TrEMBL
Match: A0A1R3HNT0 (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18001 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-09
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 15  QSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSNTPTRQRNH----KLP 74
           +S+NPTKV++ PIKV YI SP M+K SNA EFRAIVQ+LTG +S+T  +  N      +P
Sbjct: 16  KSKNPTKVKKNPIKVTYIDSPTMVKVSNADEFRAIVQELTGRNSDTREQHSNDVHTTTIP 75

Query: 75  SDDA-RTPSSMFHVDHEMEVLKFSDDMKSLLQFDDQGCFATHNNNNILPNNIMGFQSS 128
            ++A +   S   VD  + +  F  DM S L+FD+   +        +  +++GFQSS
Sbjct: 76  KEEANQVHDSSAKVDDRILLDSFPVDMSS-LEFDEDFTWRG------VQEDLLGFQSS 126

BLAST of BhiUN66G25 vs. ExPASy TrEMBL
Match: W9RT96 (VQ domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024544 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.6e-09
Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0

Query: 5   GENQYNN--QISQSQNPTKVQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGFDSN--- 64
           G +QY N   +   + P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN   
Sbjct: 8   GNSQYQNNPHLRSQKQPSKGKKKPIKIKYISSPMMVRANNASEFRAIVQELTGRNSNYTD 67

Query: 65  ---------------TPTRQRNHKLP-----SDDARTPSSMFHV-----DHEMEV-LKFS 124
                          T   + +H  P     S D     S  H      DH+  V  KFS
Sbjct: 68  LYDDVHHDESLNRTTTIFSESDHDQPGWSQFSADYHPQGSDDHALVDDRDHDHHVGGKFS 127

Query: 125 DDMKSLL-QFDDQGCFATHNNNNILPNNIMGFQSSCFF 131
           +   SLL Q D+ G F      + +  +  GFQSSC F
Sbjct: 128 NPNVSLLGQIDELGLFW----RSEVSESFNGFQSSCLF 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN60779.12.4e-5282.73hypothetical protein Csa_019238 [Cucumis sativus][more]
KAG6599333.13.0e-3968.94hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0063578.17.5e-2283.78hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa][more]
XP_021282108.17.0e-1242.19uncharacterized protein LOC110414990 [Herrania umbratica][more]
OMO71983.13.3e-0941.53VQ motif-containing protein [Corchorus capsularis][more]
Match NameE-valueIdentityDescription
A0A0A0LIA71.2e-5282.73VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010150 PE=4 SV=... [more]
A0A5A7V7M13.6e-2283.78VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1A5333.4e-1242.19uncharacterized protein LOC110414990 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
A0A1R3HNT01.6e-0941.53VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18001 P... [more]
W9RT964.6e-0937.97VQ domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024544 PE=4 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 32..59
e-value: 4.2E-10
score: 38.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..77
NoneNo IPR availablePANTHERPTHR33624:SF17VQ MOTIF PROTEINcoord: 8..128
IPR039335Sigma factor binding protein 1/2PANTHERPTHR33624SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTICcoord: 8..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
BhiUN66M25BhiUN66M25mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051091 positive regulation of DNA-binding transcription factor activity