BhiUN533G35 (gene) Wax gourd (B227) v1

Overview
NameBhiUN533G35
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionSWIM-type domain-containing protein
LocationContig533: 753678 .. 754118 (-)
RNA-Seq ExpressionBhiUN533G35
SyntenyBhiUN533G35
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGGATTACTAAGAATTATGTTGTTTATAATAACATGGAGGAGAACTTTGGATACAGAAGTGTGAAAAAGTTGGAGAAATATAAATCCCTTTATAGGAAAATTGTACCGTTTTGGGCTGAAAATTTGATGTTCGAGGTTGGGTATGGTGACACCCAATTTGTTGTTGACCTTGACAAGAGAACATGTTCTTGTCGAAAAGGGACTAGTGGAATTCCTTACCAACATTCTATTCAATGTATTGATTATGTAAAAAGGAGACCTGAAACATTTCTTGATGAAGCATATAGTAAACAAACTCAATTGAGCATCTACTCATATTTCATGCAATCATTGAATGGCCTGTCTTTTGGCCTATGACTACAATGTAACCATTGCTTCCACCTACCATCAGAAGGATCTCAGGTTGACCTAGAAAACAAAGGAAGCGAGACGTAG

mRNA sequence

ATGATTAGGATTACTAAGAATTATGTTGTTTATAATAACATGGAGGAGAACTTTGGATACAGAAGTGTGAAAAAGTTGGAGAAATATAAATCCCTTTATAGGAAAATTGTACCGTTTTGGGCTGAAAATTTGATGTTCGAGGTTGGGTATGGTGACACCCAATTTGTTGTTGACCTTGACAAGAGAACATGTTCTTGTCGAAAAGGGACTAGTGGAATTCCTTACCAACATTCTATTCAATGTATTGATTATGTAAAAAGGAGACCTGAAACATTTCTTGATGAAGCATATAAAGGATCTCAGGTTGACCTAGAAAACAAAGGAAGCGAGACGTAG

Coding sequence (CDS)

ATGATTAGGATTACTAAGAATTATGTTGTTTATAATAACATGGAGGAGAACTTTGGATACAGAAGTGTGAAAAAGTTGGAGAAATATAAATCCCTTTATAGGAAAATTGTACCGTTTTGGGCTGAAAATTTGATGTTCGAGGTTGGGTATGGTGACACCCAATTTGTTGTTGACCTTGACAAGAGAACATGTTCTTGTCGAAAAGGGACTAGTGGAATTCCTTACCAACATTCTATTCAATGTATTGATTATGTAAAAAGGAGACCTGAAACATTTCTTGATGAAGCATATAAAGGATCTCAGGTTGACCTAGAAAACAAAGGAAGCGAGACGTAG

Protein sequence

MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLDKRTCSCRKGTSGIPYQHSIQCIDYVKRRPETFLDEAYKGSQVDLENKGSET
Homology
BLAST of BhiUN533G35 vs. NCBI nr
Match: XP_033515075.1 (uncharacterized protein LOC117279634 [Nicotiana tomentosiformis])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0

Query: 24  KKLEKYKSLYRKIVPFWAENLMFEVG--YGDTQFVVDLDKRTCSCRK-GTSGIPYQHSIQ 83
           K +EK K      +P WA   +F+V   YG+ QF VDL +RTCSC++   +GIPY H+I 
Sbjct: 444 KLVEKVKEDSATSIPTWAGKFLFQVKAMYGE-QFSVDLIERTCSCKEWDLTGIPYSHAIS 503

Query: 84  CIDYVKRRPETFLDEAYK 99
           CI +++  PE F+ + YK
Sbjct: 504 CIFHIRENPENFIHDCYK 520

BLAST of BhiUN533G35 vs. NCBI nr
Match: XP_039143980.1 (uncharacterized protein LOC120281132 [Dioscorea cayenensis subsp. rotundata])

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-08
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           M RI K           +  R +KKLEK K+L       W+    ++V   + QFVVD  
Sbjct: 77  MCRIQKKRDAMQKCGSEYCPRIMKKLEKAKALSFTYSTTWSGGAQYQVLGNEGQFVVDRI 136

Query: 61  KRTCSCRK-GTSGIPYQHSIQCIDYVKRRPETFLDEAYKGS 101
           ++TCSCRK   +G+P  H+I  + Y + RPE ++DE YK S
Sbjct: 137 EKTCSCRKWQLTGVPCAHAISALYYNQDRPENYIDECYKVS 177

BLAST of BhiUN533G35 vs. NCBI nr
Match: XP_023896782.1 (uncharacterized protein LOC112008678 [Quercus suber])

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           M R  +N +    +E     +  K+L + K    K +  W+ N  FEV  G   F+VDL+
Sbjct: 826 MNRSQQNRLSILKVESELCPKVCKRLHREKMSSSKWLACWSSNTKFEVKNGLQSFIVDLE 885

Query: 61  KRTCSCRK-GTSGIPYQHSIQCIDYVKRRPETFLDEAYKGS 101
           KRTC+CRK   +GIP  H+I CI + +   E + ++ YK S
Sbjct: 886 KRTCTCRKWDITGIPCCHAISCIFFNREAAEKYTNDCYKVS 926

BLAST of BhiUN533G35 vs. NCBI nr
Match: XP_030938481.1 (uncharacterized protein LOC115963572 [Quercus lobata])

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-07
Identity = 36/99 (36.36%), Postives = 51/99 (51.52%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           MIR   N  +   +E     +  K+L K K  Y K +  WA  + FEV  G   F+VDL 
Sbjct: 114 MIRFQANREMITKVESELCPKIRKRLYKEKLAYNKWIACWAGRMKFEVKNGLESFIVDLK 173

Query: 61  KRTCSCRK-GTSGIPYQHSIQCIDYVKRRPETFLDEAYK 99
           ++ CSCRK    GIP  H+I CI + +   E +++  YK
Sbjct: 174 EKKCSCRKWDIVGIPCCHAISCIFFNREDAEKYVNACYK 212

BLAST of BhiUN533G35 vs. NCBI nr
Match: XP_039135496.1 (uncharacterized protein LOC120272686 [Dioscorea cayenensis subsp. rotundata])

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-07
Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           M RI K   V    +       +KKLEK K L       W     ++V   + QF+VD D
Sbjct: 34  MARIQKRRDVMRQCKTEQCPNILKKLEKSKQLTWSCKTTWNGGDKYQVVCREGQFIVDCD 93

Query: 61  KRTCSCRK-GTSGIPYQHSIQCIDYVKRRPETFLDEAY 98
            +TC+CRK   +GIP  H+I  + Y K+RPE +LDE Y
Sbjct: 94  AQTCTCRKWQLTGIPCPHAISSLYYNKKRPEDYLDEQY 131

BLAST of BhiUN533G35 vs. ExPASy TrEMBL
Match: A0A4D8ZGD8 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033786 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0

Query: 23  VKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLDKRTCSCRK-GTSGIPYQHSIQC 82
           +KKLEKYK L        A    + V   +  +VVDLD RTCSCR+   SGIP QH+I C
Sbjct: 431 IKKLEKYKELSSNCWTIEAGARKYSVAAWEKLYVVDLDARTCSCRQWQLSGIPCQHTIPC 490

Query: 83  IDYVKRRPETFLDEAY 98
           I   ++  E F+ E Y
Sbjct: 491 ILQERKNLEEFVHEYY 506

BLAST of BhiUN533G35 vs. ExPASy TrEMBL
Match: A0A4D8Y8M9 (26S proteasome regulatory subunit N7 OS=Salvia splendens OX=180675 GN=PSMD6 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0

Query: 23  VKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLDKRTCSCRK-GTSGIPYQHSIQC 82
           +KKLEKYK L        A    + V   +  +VVDLD RTCSCR+   S IP QH+I C
Sbjct: 359 IKKLEKYKELSSNCWATEAGARKYSVDVWEKIYVVDLDARTCSCRQWQLSEIPCQHTIPC 418

Query: 83  IDYVKRRPETFLDEAY 98
           I   ++ PE F+ E Y
Sbjct: 419 ILQERKNPEEFVHEYY 434

BLAST of BhiUN533G35 vs. ExPASy TrEMBL
Match: A0A6P4CBN0 (uncharacterized protein LOC107473412 OS=Arachis duranensis OX=130453 GN=LOC107473412 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.3e-06
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0

Query: 24  KKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLDKRTCSCRK-GTSGIPYQHSIQCI 83
           KKLE+ +    +  P+W+    +EV  G +++ VDL  R CSC+K   SGIP  H+I CI
Sbjct: 246 KKLERRRRAVGEWRPYWSAAQTYEVVNGLSKYTVDLSLRECSCKKWQLSGIPCTHAISCI 305

Query: 84  DYVKRRPETFLDEAYK 99
           ++     E+++D+ YK
Sbjct: 306 NFKGLELESYVDDCYK 321

BLAST of BhiUN533G35 vs. ExPASy TrEMBL
Match: A0A5C7H4D7 (SWIM-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021043 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.0e-06
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           M R+   Y    + E N   +  K L+K +   R + P   + L FEV YG  QFVV LD
Sbjct: 316 MKRMQDRYEAAMSWEGNIPPKINKLLQKTQQKGRYLDPLRCDQLEFEVVYGTRQFVVKLD 375

Query: 61  KRTCSCR-KGTSGIPYQHSIQCIDYVKRRPETFLDEAYK 99
            +TC C     SGIP +H++ CI  +++  E ++ E  K
Sbjct: 376 DQTCQCEIWAVSGIPCKHAMACITRMRQNVEDYVHEYLK 414

BLAST of BhiUN533G35 vs. ExPASy TrEMBL
Match: A0A7N2RAY5 (SWIM-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.0e-06
Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 0

Query: 1   MIRITKNYVVYNNMEENFGYRSVKKLEKYKSLYRKIVPFWAENLMFEVGYGDTQFVVDLD 60
           M R   N  +   +E     +  K+L K K    K +  WA  + FEV  G   F+VDL+
Sbjct: 685 MTRFQANREMIMKVESELCPKIRKRLYKEKLTCSKWIACWAGRMKFEVKNGLESFIVDLE 744

Query: 61  KRTCSCRK-GTSGIPYQHSIQCIDYVKRRPETFLDEAYK 99
           ++ CSCRK    GIP  H+I CI + +   E +++  YK
Sbjct: 745 EKKCSCRKWDIVGIPCCHAISCIFFNREDAEKYVNACYK 783

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_033515075.14.0e-0843.59uncharacterized protein LOC117279634 [Nicotiana tomentosiformis][more]
XP_039143980.16.8e-0837.62uncharacterized protein LOC120281132 [Dioscorea cayenensis subsp. rotundata][more]
XP_023896782.13.4e-0735.64uncharacterized protein LOC112008678 [Quercus suber][more]
XP_030938481.14.4e-0736.36uncharacterized protein LOC115963572 [Quercus lobata][more]
XP_039135496.14.4e-0738.78uncharacterized protein LOC120272686 [Dioscorea cayenensis subsp. rotundata][more]
Match NameE-valueIdentityDescription
A0A4D8ZGD81.8e-0644.74Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033786 PE=4 SV=1[more]
A0A4D8Y8M92.4e-0644.7426S proteasome regulatory subunit N7 OS=Salvia splendens OX=180675 GN=PSMD6 PE=4... [more]
A0A6P4CBN05.3e-0638.16uncharacterized protein LOC107473412 OS=Arachis duranensis OX=130453 GN=LOC10747... [more]
A0A5C7H4D79.0e-0635.35SWIM-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02104... [more]
A0A7N2RAY59.0e-0634.34SWIM-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
BhiUN533M35BhiUN533M35mRNA