Bhi12G002058 (gene) Wax gourd (B227) v1

Overview
NameBhi12G002058
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 73503053 .. 73503429 (+)
RNA-Seq ExpressionBhi12G002058
SyntenyBhi12G002058
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGGGCAATCAGATCCAGAGTCGATCGAGCCGTGGGTGTGGCGGATTTCCACTACCGGAAGGAGTCGCCGTCAATGGAGGCTGCTGGTTTGCTGGGAGAGGTACCTGCGCGAGCGGCACGGTGCTGGAGCGTCGTTTGAACGCCACCGGTTAGTTGAGAAGGGCTTGCTGGAGCTTGTGGGTCACGCAGATCAAAACCTCCGCCAGCGTTCACTGCTGTCGCTGGAAACAGAACAATAACAGGGAGCCACTGAGGCGCATCCGAGCGGCGCGGCGTTGCCGGCGTCCTGTTCGTCGATTACAGCAGGTGGATTCCGGCCAATGGATCTGCTGTCAGGCCACTACACGTAGGACGGTTGTCGTCGCCGAATAA

mRNA sequence

ATGAAGTGGGCAATCAGATCCAGAGTCGATCGAGCCGTGGGTGTGGCGGATTTCCACTACCGGAAGGAGTCGCCGTCAATGGAGGCTGCTGGTTTGCTGGGAGAGATCAAAACCTCCGCCAGCGTTCACTGCTGTCGCTGGAAACAGAACAATAACAGGGAGCCACTGAGGCGCATCCGAGCGGCGCGGCGTTGCCGGCGTCCTGTTCGTCGATTACAGCAGGTGGATTCCGGCCAATGGATCTGCTGTCAGGCCACTACACGTAGGACGGTTGTCGTCGCCGAATAA

Coding sequence (CDS)

ATGAAGTGGGCAATCAGATCCAGAGTCGATCGAGCCGTGGGTGTGGCGGATTTCCACTACCGGAAGGAGTCGCCGTCAATGGAGGCTGCTGGTTTGCTGGGAGAGATCAAAACCTCCGCCAGCGTTCACTGCTGTCGCTGGAAACAGAACAATAACAGGGAGCCACTGAGGCGCATCCGAGCGGCGCGGCGTTGCCGGCGTCCTGTTCGTCGATTACAGCAGGTGGATTCCGGCCAATGGATCTGCTGTCAGGCCACTACACGTAGGACGGTTGTCGTCGCCGAATAA

Protein sequence

MKWAIRSRVDRAVGVADFHYRKESPSMEAAGLLGEIKTSASVHCCRWKQNNNREPLRRIRAARRCRRPVRRLQQVDSGQWICCQATTRRTVVVAE
Homology
[Close]
BLAST of Bhi12G002058 vs. NCBI nr
Match: KGN46350.2 (hypothetical protein Csa_005456 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 4.2e-06
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1  MKWAIRSRVDRAVGVADFHYRKESPSMEAAGLLGEIK 38
          MKW IRSR DRAVGV ++HYRK SP MEAAG LGE++
Sbjct: 1  MKWVIRSRADRAVGVENYHYRKASPPMEAAGSLGEVE 37

[Close]
BLAST of Bhi12G002058 vs. ExPASy TrEMBL
Match: A0A0A0KBX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087730 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.7e-09
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0 

Query: 1  MKWAIRSRVDRAVGVADFHYRKESPSMEAAGLLGEIKTSASVHCCRWKQNNNREPLRRIR 60
          MKW IRSR DRAVGV ++HYRK SP MEAAG LGE++         ++ + + E  +   
Sbjct: 1  MKWVIRSRADRAVGVENYHYRKASPPMEAAGSLGEVERERQGAGVSFEGHRSLETEKWPT 60

Query: 61 AARRCRRPVRRLQQVDSGQW---ICCQATTRR 90
            RRCRR V R   + +G +   I CQA  RR
Sbjct: 61 EERRCRRTVLR-SSITAGVFHPQIWCQAAARR 91

The following BLAST results are available for this feature:
BLAST of Bhi12G002058 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G002058 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G002058 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46350.24.2e-0672.97hypothetical protein Csa_005456 [Cucumis sativus][more]
BLAST of Bhi12G002058 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBX09.7e-0945.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087730 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M002058Bhi12M002058mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0005874 microtubule
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008017 microtubule binding