Bhi12G001892 (gene) Wax gourd (B227) v1

Overview
NameBhi12G001892
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionAcyl-coenzyme A oxidase
Locationchr12: 66105157 .. 66105354 (-)
RNA-Seq ExpressionBhi12G001892
SyntenyBhi12G001892
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

mRNA sequence

ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

Coding sequence (CDS)

ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

Protein sequence

MASTRESNWTMKEESQAGSWRIERLSLHLTLVPFPRDGSYWMGIVTAMRRQRRKWRSTWGVYQCT
Homology
BLAST of Bhi12G001892 vs. NCBI nr
Match: XP_038904957.1 (acyl-coenzyme A oxidase, peroxisomal [Benincasa hispida])

HSP 1 Score: 64.7 bits (156), Expect = 3.4e-07
Identity = 33/54 (61.11%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLTLVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS  E NWT KEESQA S RIERLSLHLT +P P DGSY + I T     + K
Sbjct: 1  MASATEPNWTAKEESQAASRRIERLSLHLTPIPLPGDGSYRIEIATCAGTSKAK 54

BLAST of Bhi12G001892 vs. NCBI nr
Match: XP_008453798.1 (PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis melo] >TYK16745.1 acyl-coenzyme A oxidase, peroxisomal [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+++ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVEDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. NCBI nr
Match: KAA0036009.1 (acyl-coenzyme A oxidase, peroxisomal [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+ +ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVDDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. ExPASy TrEMBL
Match: A0A5D3CZ13 (Acyl-coenzyme A oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005850 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.9e-06
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+++ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVEDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. ExPASy TrEMBL
Match: A0A1S3BX82 (Acyl-coenzyme A oxidase OS=Cucumis melo OX=3656 GN=LOC103494416 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.9e-06
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+++ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVEDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. ExPASy TrEMBL
Match: A0A5A7T3N2 (Acyl-coenzyme A oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00020 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+ +ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVDDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. ExPASy TrEMBL
Match: A0A0A0KZB6 (Acyl-coenzyme A oxidase OS=Cucumis sativus OX=3659 GN=Csa_4G028450 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.9e-04
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVT 47
          MAS RESN   ++ES A S RIERLSLHLT ++P P D SY M IVT
Sbjct: 1  MASPRESNRAPEDESHAASRRIERLSLHLTPMIPLPGDDSYRMEIVT 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038904957.13.4e-0761.11acyl-coenzyme A oxidase, peroxisomal [Benincasa hispida][more]
XP_008453798.11.4e-0560.00PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis melo] >TYK16745.1 acyl-... [more]
KAA0036009.12.4e-0560.00acyl-coenzyme A oxidase, peroxisomal [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CZ136.9e-0660.00Acyl-coenzyme A oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BX826.9e-0660.00Acyl-coenzyme A oxidase OS=Cucumis melo OX=3656 GN=LOC103494416 PE=3 SV=1[more]
A0A5A7T3N21.2e-0560.00Acyl-coenzyme A oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KZB64.9e-0463.83Acyl-coenzyme A oxidase OS=Cucumis sativus OX=3659 GN=Csa_4G028450 PE=3 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001892Bhi12M001892mRNA