Bhi12G001735 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G001735
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr12: 61688469 .. 61689431 (-)
RNA-Seq Expression	Bhi12G001735
Synteny	Bhi12G001735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTTGTTAATTTTTCCCCTTCCATATATATATATATATATATATATATATCAGCAGTGTGTACAAAACAGTAGCCTGAATTTTCCCTTTATATATATGCTTCATTTCTCCCTAATTCACACCATATTCTTAATTACCAAACAAATAACGAGGTAATTTTTAATCAAATTCATTCCTAATTTTGCCTTTTATTTACCTAAATCAAAGTTTGTTTATCGTTTTTGTTTATGTTTTTGTATTTTTTAAGGTCTTGTAGTGATGATTATGATGAAGAGGGTGCTCTTTCTTTTTGCCGCCTTGTTCCTTCTGCTTGTGGCAGACGCCACGATGCACGGCGTCGTCGAGAAGAAGCATACACGTAAACTAGCTCAAAGCTTCGGTGACCGAAGAACAACCCCCGAAGCGGGAGCGGCCAGCAGTGAAAATGAGCCTGACCCTGAAGATGCTAATGTTGCTACAGACGTTGGAGCTAACGACGACGACGAAAATCTTGGTTATAAAAATTATGGAAAGGGCTCCGACACCGAAACTCACCGTTACTTCTCGAGTGATAAGCCATACAGACCCTAGAAAAGGTTTTGACATCATCACCATCGTTGTCGTGGTCATCGTACCAGGTAGTCAATTGTAAAGAAGAAAAAAGTGATGTTTTTCTATTGTAATAAGTGAAATGTGCATGGAATGTCTGCTGAAGATCCTAAAGTTAAAGAGATGGCTAGCTGAAGCATGCAGGCTTTGGCATTTCACAGAGTTTGATGTTTGTTGTGTGTTGTGAAAAAATATAATGAATAATATGGATGAAATTAAAATACATGTGTGTATCATATAGTTTTATGTTATGCTGCTATGATTTGGCTTGTAATTATTTTATGAAAGGAAGAATGCTTAATATATATAAAGTTGGTGATGATCTTAATCTTGTTATTAGTAAATAAATAACTTGTGATTAATTCTTGTCAAA

mRNA sequence

ATTTCTTGTTAATTTTTCCCCTTCCATATATATATATATATATATATATATATCAGCAGTGTGTACAAAACAGTAGCCTGAATTTTCCCTTTATATATATGCTTCATTTCTCCCTAATTCACACCATATTCTTAATTACCAAACAAATAACGAGGTCTTGTAGTGATGATTATGATGAAGAGGGTGCTCTTTCTTTTTGCCGCCTTGTTCCTTCTGCTTGTGGCAGACGCCACGATGCACGGCGTCGTCGAGAAGAAGCATACACGTAAACTAGCTCAAAGCTTCGGTGACCGAAGAACAACCCCCGAAGCGGGAGCGGCCAGCAGTGAAAATGAGCCTGACCCTGAAGATGCTAATGTTGCTACAGACGTTGGAGCTAACGACGACGACGAAAATCTTGGTTATAAAAATTATGGAAAGGGCTCCGACACCGAAACTCACCGTTACTTCTCGAGTGATAAGCCATACAGACCCTAGAAAAGGTTTTGACATCATCACCATCGTTGTCGTGGTCATCGTACCAGGTAGTCAATTGTAAAGAAGAAAAAAGTGATGTTTTTCTATTGTAATAAGTGAAATGTGCATGGAATGTCTGCTGAAGATCCTAAAGTTAAAGAGATGGCTAGCTGAAGCATGCAGGCTTTGGCATTTCACAGAGTTTGATGTTTGTTGTGTGTTGTGAAAAAATATAATGAATAATATGGATGAAATTAAAATACATGTGTGTATCATATAGTTTTATGTTATGCTGCTATGATTTGGCTTGTAATTATTTTATGAAAGGAAGAATGCTTAATATATATAAAGTTGGTGATGATCTTAATCTTGTTATTAGTAAATAAATAACTTGTGATTAATTCTTGTCAAA

Coding sequence (CDS)

ATGATTATGATGAAGAGGGTGCTCTTTCTTTTTGCCGCCTTGTTCCTTCTGCTTGTGGCAGACGCCACGATGCACGGCGTCGTCGAGAAGAAGCATACACGTAAACTAGCTCAAAGCTTCGGTGACCGAAGAACAACCCCCGAAGCGGGAGCGGCCAGCAGTGAAAATGAGCCTGACCCTGAAGATGCTAATGTTGCTACAGACGTTGGAGCTAACGACGACGACGAAAATCTTGGTTATAAAAATTATGGAAAGGGCTCCGACACCGAAACTCACCGTTACTTCTCGAGTGATAAGCCATACAGACCCTAG

Protein sequence

MIMMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDPEDANVATDVGANDDDENLGYKNYGKGSDTETHRYFSSDKPYRP

Homology

[Close]

BLAST of Bhi12G001735 vs. NCBI nr
Match: XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-22
Identity = 75/112 (66.96%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MIMMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDP 60
           MIMMKRVL LFAAL LLL+ADA    +VEKK  RKLAQ F +RR TP+AG  +  NE D 
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERR-TPKAGVFNDANESDL 60

Query: 61  EDANVA-TDVGAN--------DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
           E+ +VA  DV AN        DDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  ENTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

[Close]

BLAST of Bhi12G001735 vs. NCBI nr
Match: TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-21
Identity = 72/110 (65.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 3   MMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDPED 62
           MMKRVL LFA L LLL+ADA M  VVEKK  RKLAQ  GDRR  P+A   +  NEP+ + 
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRR-IPKAEVFNDANEPELKK 60

Query: 63  ANVA-TDVGAN--------DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
            +VA  DV AN        DDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  TDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

[Close]

BLAST of Bhi12G001735 vs. NCBI nr
Match: KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-21
Identity = 68/111 (61.26%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 3   MMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDPED 62
           MMK+VL L     LL++ DA MHGVVEKKH RKLA+S G  +TTPE    S   E  PED
Sbjct: 1   MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGG-QTTPETEVFSGVYEHGPED 60

Query: 63  ------ANVATDVGAN----DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
                 A+V T++  N    DDDENLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 61  VEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 110

[Close]

BLAST of Bhi12G001735 vs. NCBI nr
Match: KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-21
Identity = 68/111 (61.26%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 3   MMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDPED 62
           MMK+VL L     LL++ DA MHGVVEKKH RKLA+S G  +TTPE    S   E  PED
Sbjct: 21  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGG-QTTPETEVFSGVYEHGPED 80

Query: 63  ------ANVATDVGAN----DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
                 A+V T++  N    DDDENLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 81  VEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 130

[Close]

BLAST of Bhi12G001735 vs. NCBI nr
Match: KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-19
Identity = 61/104 (58.65%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MIMMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSF-GDRRTTPEAGAASSENEPD 60
           M MMKR L LFA   LL+  DATMH V++KK  RKLAQSF G    T   G      + D
Sbjct: 1   MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQIPKTGVFGGVKYSEDAD 60

Query: 61  PEDANVATDVGANDDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
              A+V  +   ++DDENLGYKNYGKGSDTETHRYFSS+KPYRP
Sbjct: 61  VAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEKPYRP 104

[Close]

BLAST of Bhi12G001735 vs. ExPASy TrEMBL
Match: A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.8e-23
Identity = 75/112 (66.96%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MIMMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDP 60
           MIMMKRVL LFAAL LLL+ADA    +VEKK  RKLAQ F +RR TP+AG  +  NE D 
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERR-TPKAGVFNDANESDL 60

Query: 61  EDANVA-TDVGAN--------DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
           E+ +VA  DV AN        DDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  ENTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

[Close]

BLAST of Bhi12G001735 vs. ExPASy TrEMBL
Match: A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 72/110 (65.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 3   MMKRVLFLFAALFLLLVADATMHGVVEKKHTRKLAQSFGDRRTTPEAGAASSENEPDPED 62
           MMKRVL LFA L LLL+ADA M  VVEKK  RKLAQ  GDRR  P+A   +  NEP+ + 
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRR-IPKAEVFNDANEPELKK 60

Query: 63  ANVA-TDVGAN--------DDDENLGYKNYGKGSDTETHRYFSSDKPYRP 104
            +VA  DV AN        DDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  TDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

The following BLAST results are available for this feature:

BLAST of Bhi12G001735 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001735 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001735 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150985.1	2.0e-22	66.96	uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical ...	[more]
TYK02960.1	1.0e-21	65.45	uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]	[more]
KAG6575119.1	3.8e-21	61.26	hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7013689.1	3.8e-21	61.26	hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6594018.1	3.6e-19	58.65	hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Bhi12G001735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGD6	9.8e-23	66.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1	[more]
A0A5D3BV16	4.9e-22	65.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001735	Bhi12M001735	mRNA