Bhi12G001489 (gene) Wax gourd (B227) v1

Overview
NameBhi12G001489
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 54078510 .. 54078777 (+)
RNA-Seq ExpressionBhi12G001489
SyntenyBhi12G001489
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGATTATGCTCTGGTTCCAGAATTCCAAAATCTTGATATCGTCTTTTCCTTAGGCCATACTGATGCTACCATAAATAATGAGAAAGGTTTCTGGAGATTCATCAGGGTTTATGGGAATCCGAGTAGAGATAAACCGGTGGATACGTGGGAATTGATCGCAGGTTGAATGGGTTTCTAATCTTCCTTCGATTCTCGGGGGTGATTTTAATGAAATTTCAGAGGCTGATGAAAAGAGAGATCGTGCTGTAGAAGCCAAAGTCAGATAA

mRNA sequence

GCTGATTATGCTCTGGTTCCAGAATTCCAAAATCTTGATATCGTCTTTTCCTTAGGCCATACTGATGCTACCATAAATAATGAGAAAGGTTTCTGGAGATTCATCAGGGTTTATGGGAATCCGAGTAGAGATAAACCGGTTGAATGGGTTTCTAATCTTCCTTCGATTCTCGGGGGTGATTTTAATGAAATTTCAGAGGCTGATGAAAAGAGAGATCGTGCTGTAGAAGCCAAAGTCAGATAA

Coding sequence (CDS)

GCTGATTATGCTCTGGTTCCAGAATTCCAAAATCTTGATATCGTCTTTTCCTTAGGCCATACTGATGCTACCATAAATAATGAGAAAGGTTTCTGGAGATTCATCAGGGTTTATGGGAATCCGAGTAGAGATAAACCGGTTGAATGGGTTTCTAATCTTCCTTCGATTCTCGGGGGTGATTTTAATGAAATTTCAGAGGCTGATGAAAAGAGAGATCGTGCTGTAGAAGCCAAAGTCAGATAA

Protein sequence

ADYALVPEFQNLDIVFSLGHTDATINNEKGFWRFIRVYGNPSRDKPVEWVSNLPSILGGDFNEISEADEKRDRAVEAKVR
Homology
[Close]
BLAST of Bhi12G001489 vs. NCBI nr
Match: TXG48220.1 (hypothetical protein EZV62_027514 [Acer yangbiense])

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 0 

Query: 8   EFQNLDIVFSLGHTDATINNEKGF-WRFIRVYGNPSRDKPV-EW--------VSNLPSIL 67
           E Q   I +S+ H +A I  E GF WRF+ VYGNPS +K V  W        V  LP + 
Sbjct: 75  ELQVTVISYSVRHINARIKMEDGFRWRFLGVYGNPSPNKRVNSWELLGRLSVVDRLPWVC 134

Query: 68  GGDFNEISEADEK 71
           GGDFNE+   +EK
Sbjct: 135 GGDFNEVLCMNEK 147

[Close]
BLAST of Bhi12G001489 vs. NCBI nr
Match: TXG57285.1 (hypothetical protein EZV62_018598 [Acer yangbiense])

HSP 1 Score: 53.5 bits (127), Expect = 9.6e-04
Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 0 

Query: 17  SLGHTDATINNEKGF-WRFIRVYGNPSRD-KPVEW--------VSNLPSILGGDFNEISE 71
           SLGH DA +  E G+ WRF   YGNP+   + V W        V  LP + GGDFNE+  
Sbjct: 110 SLGHIDARVRMEDGYLWRFSGFYGNPNPSFRRVSWDLLRRLQAVDTLPWVCGGDFNELLN 169

[Close]
BLAST of Bhi12G001489 vs. ExPASy TrEMBL
Match: A0A5C7GUF0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027514 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 0 

Query: 8   EFQNLDIVFSLGHTDATINNEKGF-WRFIRVYGNPSRDKPV-EW--------VSNLPSIL 67
           E Q   I +S+ H +A I  E GF WRF+ VYGNPS +K V  W        V  LP + 
Sbjct: 75  ELQVTVISYSVRHINARIKMEDGFRWRFLGVYGNPSPNKRVNSWELLGRLSVVDRLPWVC 134

Query: 68  GGDFNEISEADEK 71
           GGDFNE+   +EK
Sbjct: 135 GGDFNEVLCMNEK 147

[Close]
BLAST of Bhi12G001489 vs. ExPASy TrEMBL
Match: A0A5C7HKK7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018598 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04
Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 0 

Query: 17  SLGHTDATINNEKGF-WRFIRVYGNPSRD-KPVEW--------VSNLPSILGGDFNEISE 71
           SLGH DA +  E G+ WRF   YGNP+   + V W        V  LP + GGDFNE+  
Sbjct: 110 SLGHIDARVRMEDGYLWRFSGFYGNPNPSFRRVSWDLLRRLQAVDTLPWVCGGDFNELLN 169

The following BLAST results are available for this feature:
BLAST of Bhi12G001489 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G001489 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G001489 vs. NCBI nr
Match NameE-valueIdentityDescription
TXG48220.12.5e-0445.21hypothetical protein EZV62_027514 [Acer yangbiense][more]
TXG57285.19.6e-0445.31hypothetical protein EZV62_018598 [Acer yangbiense][more]
BLAST of Bhi12G001489 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5C7GUF01.2e-0445.21Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027514 PE=4 SV=1[more]
A0A5C7HKK74.6e-0445.31Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018598 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001489Bhi12M001489mRNA