Bhi12G001369 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G001369
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Enzymatic polyprotein
Location	chr12: 50435205 .. 50435484 (-)
RNA-Seq Expression	Bhi12G001369
Synteny	Bhi12G001369

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGATCTTCAAAGGAAATCAAATCAACTGGAACTTTCTCACCTACGGAGAAATTACCAGTAACATTCAAGCACTACGTTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGAAGATTATCAAAAGGAATTAGGGACTTTCTGCAAACAATACGGCATTGAACAAGATCTACCGCTTTCGAAAACAAAGAAGAAACTTCTAAGAAATCCTACAGCAAAAGACAACGAACGAAAGACAAAGAAAATCCCCGAAAGAAGAA

mRNA sequence

ATGTCTGAGATCTTCAAAGGAAATCAAATCAACTGGAACTTTCTCACCTACGGAGAAATTACCAGTAACATTCAAGCACTACGTTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGAAGATTATCAAAAGGAATTAGGGACTTTCTGCAAACAATACGGCATTGAACAAGATCTACCGCTTTCGAAAACAAAGAAGAAACTTCTAAGAAATCCTACAGCAAAAGACAACGAACGAAAGACAAAGAAAATCCCCGAAAGAAGAA

Coding sequence (CDS)

ATGTCTGAGATCTTCAAAGGAAATCAAATCAACTGGAACTTTCTCACCTACGGAGAAATTACCAGTAACATTCAAGCACTACGTTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGAAGATTATCAAAAGGAATTAGGGACTTTCTGCAAACAATACGGCATTGAACAAGATCTACCGCTTTCGAAAACAAAGAAGAAACTTCTAAGAAATCCTACAGCAAAAGACAACGAACGAAAGACAAAGAAAATCCCCGAAAGAAGAA

Protein sequence

MSEIFKGNQINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSKTKKKLLRNPTAKDNERKTKKIPERR

Homology

[Close]

BLAST of Bhi12G001369 vs. NCBI nr
Match: KAA0060293.1 (zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa] >TYK22043.1 zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12
Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 9  QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
          QINW+ LT+G+I++ +QA+ ++LC +NKH  ++IKD DY+KELGTFCKQYG+++  P  K
Sbjct: 9  QINWSELTFGDISATVQAICINLCIENKHTTKVIKDSDYRKELGTFCKQYGLDRG-PKEK 68

Query: 69 TKKK 73
           KKK
Sbjct: 69 RKKK 71

[Close]

BLAST of Bhi12G001369 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 1   MSEIFKGNQINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGI 60
           M+E     QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+
Sbjct: 705 MTENSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGL 764

Query: 61  EQDLPLSKTK------KKLLRNPTAKDNERKTKK 89
            Q     K K      KK  R    KD E   ++
Sbjct: 765 SQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRR 798

[Close]

BLAST of Bhi12G001369 vs. NCBI nr
Match: KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 6.5e-12
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q     K
Sbjct: 822 QIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEK 881

Query: 69  TK-------KKLLRNPTAKDNERKTKK 89
            K       KK  R   AKD E   ++
Sbjct: 882 KKKKKRYSSKKFFRKSKAKDQESPRRR 908

[Close]

BLAST of Bhi12G001369 vs. NCBI nr
Match: KAA0068171.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S IQ + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q     K
Sbjct: 54  QIDWANLTYGDISSTIQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEK 113

Query: 69  TKKKLLRNPTAKDNERKTKKIPERR 94
            KKK   +      + K ++ P RR
Sbjct: 114 KKKKKRYSSRKFFRKNKDQESPPRR 138

[Close]

BLAST of Bhi12G001369 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q  P  +
Sbjct: 821 QIDWANLTYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQG-PKEE 880

Query: 69  TKKKLLRNPTAK---DNERKTKKIPERR 94
            KKK  R  + K     + K ++ P+RR
Sbjct: 881 KKKKKKRYSSKKFFRKGKVKDQESPQRR 907

[Close]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL
Match: A0A5D3DES6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00180 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.3e-13
Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 9  QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
          QINW+ LT+G+I++ +QA+ ++LC +NKH  ++IKD DY+KELGTFCKQYG+++  P  K
Sbjct: 9  QINWSELTFGDISATVQAICINLCIENKHTTKVIKDSDYRKELGTFCKQYGLDRG-PKEK 68

Query: 69 TKKK 73
           KKK
Sbjct: 69 RKKK 71

[Close]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 1   MSEIFKGNQINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGI 60
           M+E     QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+
Sbjct: 705 MTENSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGL 764

Query: 61  EQDLPLSKTK------KKLLRNPTAKDNERKTKK 89
            Q     K K      KK  R    KD E   ++
Sbjct: 765 SQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRR 798

[Close]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.2e-12
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q     K
Sbjct: 822 QIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEK 881

Query: 69  TK-------KKLLRNPTAKDNERKTKK 89
            K       KK  R   AKD E   ++
Sbjct: 882 KKKKKRYSSKKFFRKSKAKDQESPRRR 908

[Close]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q  P  +
Sbjct: 821 QIDWANLTYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQG-PKEE 880

Query: 69  TKKKLLRNPTAK---DNERKTKKIPERR 94
            KKK  R  + K     + K ++ P+RR
Sbjct: 881 KKKKKKRYSSKKFFRKGKVKDQESPQRR 907

[Close]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 9   QINWNFLTYGEITSNIQALRLSLCKDNKHNQRIIKDEDYQKELGTFCKQYGIEQDLPLSK 68
           QI+W  LTYG+I+S +Q + ++LC +NKH  ++IKD DY+KELGTFCKQYG+ Q  P  +
Sbjct: 822 QIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQG-PKEE 881

Query: 69  TKKKLLRNPTAK---DNERKTKKIPERR 94
            KKK  R  + K    ++ K ++ P+RR
Sbjct: 882 KKKKKKRYSSKKFFRKSKTKDQESPQRR 908

The following BLAST results are available for this feature:

BLAST of Bhi12G001369 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001369 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001369 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060293.1	1.3e-12	56.25	zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var...	[more]
KAA0057417.1	5.0e-12	44.68	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]
KAA0056776.1	6.5e-12	47.13	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0068171.1	8.5e-12	48.24	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	8.5e-12	47.73	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Bhi12G001369 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DES6	6.3e-13	56.25	Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v...	[more]
A0A5A7URX9	2.4e-12	44.68	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]
A0A5A7UR29	3.2e-12	47.13	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]
A0A5D3BG41	4.1e-12	47.73	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5D3BEY3	4.1e-12	47.73	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001369	Bhi12M001369	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding