Bhi12G001264 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G001264
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	agamous-like MADS-box protein AGL62
Location	chr12: 47324506 .. 47325171 (-)
RNA-Seq Expression	Bhi12G001264
Synteny	Bhi12G001264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTACAGAGCATTCCGATGAAGAAAACTCTTGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAAAAAAGTACTAAACAAGTAACGTTTTCAAAGCGTCGTGCTGGACTTTTCAAGAAAGCTGGTGAGCTCTCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAACGATAAGGTTTTTTGTTTCGGTCATCCCGATGTGGAAGGGCTTTTGGATCGATATCTGAACAAAAATTTATCGCCGCCGAAGCCAGCAGAGAGTTACATTCCTGTAGAAGAGTTTAATCGTGATTTCGCCGATGTCGCTTTGGAGTTTGAGACAGAGAAGAAGCGAGCAACGGATTTGATTCGGGCGGCAGAGGATTCAAGGAAGAACGGCAGATTTTGGTGGCAGGAACCAGTGGAAGGGATGAGATTGGATGAGTTGAAGGTGTTCCGATCGGCATTGATGGATTTGAGAGCCAGAGTGGCAGAGAGAGTTGAGAAATTGACAGCGGCAAGAATTGGAGGGCTTCTTTTGCCTGCTCTTCCACCGCCGCCACAGTCGATGACATCGTCGTCGTTTCACCTTGCTGGAAATCAACAACCATTGCCACCTCCGACGGTGTTTGAACTCGCCGGAAACCACTCTACGCAACGGGGTTAG

mRNA sequence

ATGGAGAAATTACAGAGCATTCCGATGAAGAAAACTCTTGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAAAAAAGTACTAAACAAGTAACGTTTTCAAAGCGTCGTGCTGGACTTTTCAAGAAAGCTGGTGAGCTCTCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAACGATAAGGTTTTTTGTTTCGGTCATCCCGATGTGGAAGGGCTTTTGGATCGATATCTGAACAAAAATTTATCGCCGCCGAAGCCAGCAGAGAGTTACATTCCTGTAGAAGAGTTTAATCGTGATTTCGCCGATGTCGCTTTGGAGTTTGAGACAGAGAAGAAGCGAGCAACGGATTTGATTCGGGCGGCAGAGGATTCAAGGAAGAACGGCAGATTTTGGTGGCAGGAACCAGTGGAAGGGATGAGATTGGATGAGTTGAAGGTGTTCCGATCGGCATTGATGGATTTGAGAGCCAGAGTGGCAGAGAGAGTTGAGAAATTGACAGCGGCAAGAATTGGAGGGCTTCTTTTGCCTGCTCTTCCACCGCCGCCACAGTCGATGACATCGTCGTCGTTTCACCTTGCTGGAAATCAACAACCATTGCCACCTCCGACGGTGTTTGAACTCGCCGGAAACCACTCTACGCAACGGGGTTAG

Coding sequence (CDS)

ATGGAGAAATTACAGAGCATTCCGATGAAGAAAACTCTTGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAAAAAAGTACTAAACAAGTAACGTTTTCAAAGCGTCGTGCTGGACTTTTCAAGAAAGCTGGTGAGCTCTCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAACGATAAGGTTTTTTGTTTCGGTCATCCCGATGTGGAAGGGCTTTTGGATCGATATCTGAACAAAAATTTATCGCCGCCGAAGCCAGCAGAGAGTTACATTCCTGTAGAAGAGTTTAATCGTGATTTCGCCGATGTCGCTTTGGAGTTTGAGACAGAGAAGAAGCGAGCAACGGATTTGATTCGGGCGGCAGAGGATTCAAGGAAGAACGGCAGATTTTGGTGGCAGGAACCAGTGGAAGGGATGAGATTGGATGAGTTGAAGGTGTTCCGATCGGCATTGATGGATTTGAGAGCCAGAGTGGCAGAGAGAGTTGAGAAATTGACAGCGGCAAGAATTGGAGGGCTTCTTTTGCCTGCTCTTCCACCGCCGCCACAGTCGATGACATCGTCGTCGTTTCACCTTGCTGGAAATCAACAACCATTGCCACCTCCGACGGTGTTTGAACTCGCCGGAAACCACTCTACGCAACGGGGTTAG

Protein sequence

MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG

Homology

[Close]

BLAST of Bhi12G001264 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-32
Identity = 74/175 (42.29%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           +KK+ GRQKIE+ K++ +S  QVTFSKRR+GLFKKA EL  LCG EVAI+VFSP  KVF 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 69  FGHPDVEGLLDRYLNKNLSPP--------KPAESYIPVEEFNRDFADVALEFETEKKRAT 128
           FGHP+V+ ++DR++N N  PP        +       V++ N     V  + ETEKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 129 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARI 176
           +L +  E ++  G  WW++PVE + L +L+ F+  L +L+  V     +   A +
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANV 175

[Close]

BLAST of Bhi12G001264 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 76/185 (41.08%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCF 69
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCG E+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 70  GHPDVEGLLDRYLNKN---LSPPKPAESYIPVE-EFNRDFADVALEFETEKKRATDLIRA 129
           GHP VE +LDRY+++N   L+  +  +       E N     +  E E EKK+   +   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 130 AEDS-RKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAAR--IGGLLLPA 188
            ++S R++   WW++PVE M + +L+  + AL +LR  V   +     A+  + G L   
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]

BLAST of Bhi12G001264 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-25
Identity = 80/222 (36.04%), Postives = 112/222 (50.45%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           +KKTLGR+K+EI K+ K+S  QVTFSKR+AGLFKKA E   LC  ++A+IVFSP  KVF 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69  FGHPDVEGLLDRYL-------NKNLSPPKPAESY--IPVEEFNRDFADVALEFETEKKRA 128
           FGHP+V+ LLD +        N NL      ESY  + V+  N+ + +V  E E E+K  
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLD-----ESYTKLHVQMLNKSYTEVKAEVEKEQKNK 121

Query: 129 TDLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLL 188
               +  E   +N   WW +    + L +       L DL+  V E+  +L         
Sbjct: 122 QSRAQ-NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLI-------- 181

Query: 189 LPALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
                      T+ +F++  +     P TV    GN ST +G
Sbjct: 182 ---------HQTNPNFYVGSSSNAAAPATV--SGGNISTNQG 198

[Close]

BLAST of Bhi12G001264 vs. TAIR 10
Match: AT1G17310.1 (MADS-box transcription factor family protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCF 69
           K T GRQKIEIKK+E+++ +QVTFSKRR GLFKK+ ELS+L G ++A+I FS  D+++ F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 70  GHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIRAAEDS 129
           GH  V+ L+D+YL K         S + +E ++ D A                  A E+S
Sbjct: 104 GH--VDALIDKYLRK---------SPVKLEGYSGDNA------------------ADEES 163

Query: 130 RKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERV 168
           R   R WW+ PVE +  +EL+ + +AL  LR  + +++
Sbjct: 164 R---RPWWERPVESVPEEELEEYMAALSMLRENIGKKI 169

[Close]

BLAST of Bhi12G001264 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 63/181 (34.81%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           ++ T GRQKIE+KK+E +S  QVTFSKRR GLFKKA EL  L G E+ +IVFSP  KVF 
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 69  FGHPDVEGLLDRYLNKN--------------LSPPKPAESYIPVEEFNRDFADVALEFET 128
           FGHP V+ L+ R+ N N              L   +P  +   ++  N    +V    E 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRN---IQYLNNILTEVLANQEK 121

Query: 129 EKKRATDLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAAR 176
           EK++   ++   ++SR+    W+++ V+ + ++E     SAL D++ ++   + + +   
Sbjct: 122 EKQKRM-VLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVN 178

[Close]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31
Identity = 74/175 (42.29%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           +KK+ GRQKIE+ K++ +S  QVTFSKRR+GLFKKA EL  LCG EVAI+VFSP  KVF 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 69  FGHPDVEGLLDRYLNKNLSPP--------KPAESYIPVEEFNRDFADVALEFETEKKRAT 128
           FGHP+V+ ++DR++N N  PP        +       V++ N     V  + ETEKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 129 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARI 176
           +L +  E ++  G  WW++PVE + L +L+ F+  L +L+  V     +   A +
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANV 175

[Close]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 76/185 (41.08%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCF 69
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCG E+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 70  GHPDVEGLLDRYLNKN---LSPPKPAESYIPVE-EFNRDFADVALEFETEKKRATDLIRA 129
           GHP VE +LDRY+++N   L+  +  +       E N     +  E E EKK+   +   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 130 AEDS-RKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAAR--IGGLLLPA 188
            ++S R++   WW++PVE M + +L+  + AL +LR  V   +     A+  + G L   
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.8e-24
Identity = 80/222 (36.04%), Postives = 112/222 (50.45%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           +KKTLGR+K+EI K+ K+S  QVTFSKR+AGLFKKA E   LC  ++A+IVFSP  KVF 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69  FGHPDVEGLLDRYL-------NKNLSPPKPAESY--IPVEEFNRDFADVALEFETEKKRA 128
           FGHP+V+ LLD +        N NL      ESY  + V+  N+ + +V  E E E+K  
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLD-----ESYTKLHVQMLNKSYTEVKAEVEKEQKNK 121

Query: 129 TDLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLL 188
               +  E   +N   WW +    + L +       L DL+  V E+  +L         
Sbjct: 122 QSRAQ-NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLI-------- 181

Query: 189 LPALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
                      T+ +F++  +     P TV    GN ST +G
Sbjct: 182 ---------HQTNPNFYVGSSSNAAAPATV--SGGNISTNQG 198

[Close]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-21
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 0


Query: 10  KKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCF 69
           +K LGR+KIE+ K+  +S  QVTFSKRR+GLFKK  EL  LC  E+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 70  GHPDVEGLLD----RYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIRA 129
           GHP+V  LLD    R +  N +    + + + ++  N    +V  E E E++    +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ- 122

Query: 130 AEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKL 171
            E   K+   WW+     + L +    +  L  L+  V E+V +L
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 54/166 (32.53%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 13  LGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFCFGHP 72
           +GR+KI+++ ++  +T+QVTFSKRR GLFKKA EL+ LC  E+ I+VFSP  K F +G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 73  DVEGLLDRYL----NKNLSPPKPAESYIP-VEEFNRDFADVALEFETEKKRATDLIRAAE 132
           +++ + +R++    + +    + + +Y P ++  +     +  E E EK+R     ++ E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGE---KSQE 120

Query: 133 DSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAA 174
                G   ++E +E + LDEL  ++  L  +  R+  +V  L A+
Sbjct: 121 KLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQAS 163

[Close]

BLAST of Bhi12G001264 vs. NCBI nr
Match: XP_038875004.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 434.9 bits (1117), Expect = 4.2e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60
           MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF
Sbjct: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60

Query: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120
           SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT
Sbjct: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120

Query: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180
           DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL
Sbjct: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180

Query: 181 PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
           PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG
Sbjct: 181 PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 221

[Close]

BLAST of Bhi12G001264 vs. NCBI nr
Match: XP_004147877.3 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical protein Csa_002516 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 8.3e-98
Identity = 187/221 (84.62%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60
           MEKL +IPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120
           SPNDK+FCFGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA 
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180
           +LIRAAEDSRKNG FWWQE VEG+RL+ELK FRSALMDLRA+VAERVEKLTA RIGG LL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
           PALPPPPQ MTSSSFHL GN Q LPPPT F LAGN     G
Sbjct: 181 PALPPPPQPMTSSSFHLIGNHQELPPPTAFHLAGNQRVATG 221

[Close]

BLAST of Bhi12G001264 vs. NCBI nr
Match: XP_008466532.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 187/228 (82.02%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60
           MEKL +IPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120
           SPNDKVFCFGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA 
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180
           +LIRAAEDSRKNG FWWQE  EGMRL+ELK FRSALMDLRA+VAERVEKLTA RIGG LL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQSM-------TSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
           PALPPPPQ         +SSSFHLAGN Q LPPP  F LAGNH    G
Sbjct: 181 PALPPPPQPQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATG 228

[Close]

BLAST of Bhi12G001264 vs. NCBI nr
Match: KAA0041553.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 181/220 (82.27%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           MKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIRAAED 128
           FGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA +LIRAAED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPALPPPPQ 188
           SRKNG FWWQE  EGMRL+ELK FRSALMDLRA+VAERVEKLTA RIGG LLPALPPPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 189 SM-------TSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
                    +SSSFHLAGN Q LPPP  F LAGNH    G
Sbjct: 181 PQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATG 220

[Close]

BLAST of Bhi12G001264 vs. NCBI nr
Match: KAG6574839.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.6 bits (823), Expect = 5.2e-84
Identity = 163/198 (82.32%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 5   QSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPND 64
           +SIPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIR 124
           KVFCFGHPDV+ LLDRYL  NLSPPKPAESY+PV EFNRDFAD+ LEFE EKKRA +LI+
Sbjct: 69  KVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPAL- 184
           A+E+SR +G FWW+E VEGMRL+ELK FRS+LMDLRA+VAE+VEKLTA RIGG LLPAL 
Sbjct: 129 ASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

Query: 185 -PPPPQSMTSSSFHLAGN 201
            PPPPQ MT  SFHLAGN
Sbjct: 189 PPPPPQPMTPPSFHLAGN 206

[Close]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.0e-98
Identity = 187/221 (84.62%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60
           MEKL +IPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120
           SPNDK+FCFGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA 
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180
           +LIRAAEDSRKNG FWWQE VEG+RL+ELK FRSALMDLRA+VAERVEKLTA RIGG LL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQSMTSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
           PALPPPPQ MTSSSFHL GN Q LPPPT F LAGN     G
Sbjct: 181 PALPPPPQPMTSSSFHLIGNHQELPPPTAFHLAGNQRVATG 221

[Close]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.9e-96
Identity = 187/228 (82.02%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVF 60
           MEKL +IPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRAT 120
           SPNDKVFCFGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA 
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 DLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLL 180
           +LIRAAEDSRKNG FWWQE  EGMRL+ELK FRSALMDLRA+VAERVEKLTA RIGG LL
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

Query: 181 PALPPPPQSM-------TSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
           PALPPPPQ         +SSSFHLAGN Q LPPP  F LAGNH    G
Sbjct: 181 PALPPPPQPQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATG 228

[Close]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 181/220 (82.27%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 9   MKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPNDKVFC 68
           MKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIRAAED 128
           FGHPDV+ LLDRYL  NLSPPKPAESYIPV EFNRDFAD ALEFE EKKRA +LIRAAED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPALPPPPQ 188
           SRKNG FWWQE  EGMRL+ELK FRSALMDLRA+VAERVEKLTA RIGG LLPALPPPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 189 SM-------TSSSFHLAGNQQPLPPPTVFELAGNHSTQRG 222
                    +SSSFHLAGN Q LPPP  F LAGNH    G
Sbjct: 181 PQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATG 220

[Close]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84
Identity = 163/198 (82.32%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 5   QSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPND 64
           +SIPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIR 124
           KVFCFGHPDV+ LLDRYL  NLSPPKPAESY+PV EFNRDFAD+ LEFE EKKRA +LI+
Sbjct: 69  KVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPALP 184
           A+E+SR +G FWW+E VEGMRL+ELK FRS+LMDLRA+VAE+VEKLTA RIGG LLPALP
Sbjct: 129 ASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

Query: 185 PPP--QSMTSSSFHLAGN 201
           PPP  Q MT  SFHLAGN
Sbjct: 189 PPPPTQPMTPPSFHLAGN 206

[Close]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 7.3e-84
Identity = 160/196 (81.63%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 5   QSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGVEVAIIVFSPND 64
           +SIPMKKTLGRQKIEIKKLEKKS+KQVTFSKRRAGLFKKAGELS+LCG EVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKRATDLIR 124
           KVFCFGHP+V+ LLDRYL  NLSPPKPAESY+PV EFNRDFAD+ LEFE EKKRA +LI+
Sbjct: 69  KVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGLLLPALP 184
           A+E+SR +G FWW+E VEGMRL+ELK FRS+LMDLRA+VAE+VEKLTA RIGG LLPALP
Sbjct: 129 ASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

Query: 185 PPPQSMTSSSFHLAGN 201
           PPP  M   SFHLAGN
Sbjct: 189 PPPPPMMPPSFHLAGN 204

The following BLAST results are available for this feature:

BLAST of Bhi12G001264 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	2.2e-32	42.29	AGAMOUS-like 62	[more]
AT2G24840.1	1.1e-28	41.08	AGAMOUS-like 61	[more]
AT1G65360.1	3.4e-25	36.04	AGAMOUS-like 23	[more]
AT1G17310.1	1.2e-22	40.51	MADS-box transcription factor family protein	[more]
AT4G36590.1	1.2e-22	34.81	MADS-box transcription factor family protein	[more]

BLAST of Bhi12G001264 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	3.1e-31	42.29	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.6e-27	41.08	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	4.8e-24	36.04	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	2.2e-21	36.97	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	1.1e-17	32.53	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Bhi12G001264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875004.1	4.2e-118	100.00	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
XP_004147877.3	8.3e-98	84.62	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical p...	[more]
XP_008466532.1	1.0e-95	82.02	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
KAA0041553.1	2.3e-92	82.27	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamo...	[more]
KAG6574839.1	5.2e-84	82.32	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Bhi12G001264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE01	4.0e-98	84.62	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A1S3CRI8	4.9e-96	82.02	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A5D3D807	1.1e-92	82.27	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1H4M6	2.5e-84	82.32	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A6J1KVC9	7.3e-84	81.63	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 15..35 score: 50.72 coord: 35..50 score: 72.09 coord: 50..71 score: 40.55
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 13..72 e-value: 3.3E-32 score: 123.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 23..69 e-value: 2.3E-23 score: 81.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 15..69
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 13..73 score: 26.268024
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 25..91 e-value: 7.2E-27 score: 95.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 14..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..221
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 14..171
None	No IPR available	PANTHER	PTHR11945:SF580	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 14..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001264	Bhi12M001264	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity