Bhi12G001004 (gene) Wax gourd (B227) v1

Overview
NameBhi12G001004
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRNA helicase SDE3
Locationchr12: 34654900 .. 34655526 (+)
RNA-Seq ExpressionBhi12G001004
SyntenyBhi12G001004
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

mRNA sequence

GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

Coding sequence (CDS)

GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

Protein sequence

VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVEGATFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKLWIEDIVLQETCRHDAI
Homology
BLAST of Bhi12G001004 vs. TAIR 10
Match: AT1G05460.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23
Identity = 59/181 (32.60%), Postives = 100/181 (55.25%), Query Frame = 0

Query: 9   LGPHQKNAIRRISLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNAT 68
           L   Q  +I  +   + +PPY+I GPP       +  A  Q+Y+T  N ++L+CAP N+ 
Sbjct: 397 LNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSA 456

Query: 69  CDELMRSLKEV----ILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFH 128
            D ++  L  +    I D+++FR     R  +E   +I+  C ++E +  F CP L    
Sbjct: 457 ADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELI--FKCPPLKALT 516

Query: 129 KYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVT 180
           +YK+++ST+MS+  L+ +G+  GHFTHI L +A +A EPE ++ V  +   +  T V++ 
Sbjct: 517 RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAV--SNLCLTETVVVLA 573

BLAST of Bhi12G001004 vs. ExPASy Swiss-Prot
Match: Q8GYD9 (Probable RNA helicase SDE3 OS=Arabidopsis thaliana OX=3702 GN=SDE3 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 59/181 (32.60%), Postives = 100/181 (55.25%), Query Frame = 0

Query: 9   LGPHQKNAIRRISLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNAT 68
           L   Q  +I  +   + +PPY+I GPP       +  A  Q+Y+T  N ++L+CAP N+ 
Sbjct: 397 LNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSA 456

Query: 69  CDELMRSLKEV----ILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFH 128
            D ++  L  +    I D+++FR     R  +E   +I+  C ++E +  F CP L    
Sbjct: 457 ADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELI--FKCPPLKALT 516

Query: 129 KYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVT 180
           +YK+++ST+MS+  L+ +G+  GHFTHI L +A +A EPE ++ V  +   +  T V++ 
Sbjct: 517 RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAV--SNLCLTETVVVLA 573

BLAST of Bhi12G001004 vs. ExPASy Swiss-Prot
Match: Q0V8H6 (Putative helicase MOV-10 OS=Bos taurus OX=9913 GN=MOV10 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16
Identity = 53/160 (33.12%), Postives = 82/160 (51.25%), Query Frame = 0

Query: 11  PHQKNAIRRISL-LRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATC 70
           P Q  A++ I +   R  PYII GPP       +  A  Q+    P   IL CAP N+  
Sbjct: 501 PEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGA 560

Query: 71  DELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKII 130
           D L + L+ V L S ++R     R+    P+DI P C+++     F  P   +  +Y+++
Sbjct: 561 DLLCQRLR-VHLPSSIYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVL 620

Query: 131 LSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLV 164
           ++T +++ RL        HFTHIF+ +A  A+EPE LV +
Sbjct: 621 ITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAI 659

BLAST of Bhi12G001004 vs. ExPASy Swiss-Prot
Match: Q5ZKD7 (Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-16
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 0

Query: 23  LRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATCDELMRSLKEVILD 82
           + R  PY+I GPP       +  A  Q++S   + +IL CAP N+  D L + L   I  
Sbjct: 506 MSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAP 565

Query: 83  SKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDK 142
             ++R         + P D+ P C++++  KC+  P       Y+I+++T +++ RL   
Sbjct: 566 RYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVSA 625

Query: 143 GLAAGHFTHIFLLDASEAIEPEVLVLVP--LTKFSIDT 173
               G+F+H+F+ +   A+EPE +V +   LT    DT
Sbjct: 626 NFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDT 663

BLAST of Bhi12G001004 vs. ExPASy Swiss-Prot
Match: Q9BXT6 (RNA helicase Mov10l1 OS=Homo sapiens OX=9606 GN=MOV10L1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 59/193 (30.57%), Postives = 97/193 (50.26%), Query Frame = 0

Query: 9   LGPHQKNAIRRI-SLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNA 68
           L  +QK A++RI S   R  PYI+ GPP       +  A  Q++   P+ +IL+CAP N+
Sbjct: 745 LNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPSNS 804

Query: 69  TCDELMRSLKE--VILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHK 128
             D +   L E  V+  + M R     R  +   D + P C   ED+         +  +
Sbjct: 805 AADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYCRDGEDIW--------KASR 864

Query: 129 YKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVTG 188
           ++II++T  SS   +  G+  GHFTH+F+ +A +A EPE   L+PL   S  +  +++ G
Sbjct: 865 FRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPE--CLIPLGLMSDISGQIVLAG 924

Query: 189 KTWKQPCWVRSKL 193
              +    ++S+L
Sbjct: 925 DPMQLGPVIKSRL 927

BLAST of Bhi12G001004 vs. ExPASy Swiss-Prot
Match: Q9HCE1 (Helicase MOV-10 OS=Homo sapiens OX=9606 GN=MOV10 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 0

Query: 11  PHQKNAIRRI-SLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATC 70
           P Q  A+R I +   R  PYII GPP       +  A  Q+    P   IL CAP N+  
Sbjct: 501 PEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGA 560

Query: 71  DELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKII 130
           D L + L+ V L S ++R     R+    P+DI P C+++     +  P   +  +Y+++
Sbjct: 561 DLLCQRLR-VHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVL 620

Query: 131 LSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLV 164
           ++T +++ RL        HFTHIF+ +A   +EPE LV +
Sbjct: 621 ITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAI 659

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993134.1 (probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993136.1 probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993137.1 probable RNA helicase SDE3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 6.0e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 458 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 517

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 518 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 577

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 578 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 637

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 638 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 667

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993138.1 (probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993139.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993140.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993141.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 6.0e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 453 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 512

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 513 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 572

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 573 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 632

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 633 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 662

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993142.1 (probable RNA helicase SDE3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 6.0e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 400 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 459

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 460 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 519

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 520 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 579

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 580 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 609

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022938441.1 (probable RNA helicase SDE3 isoform X3 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 517 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 576

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 577 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 636

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 637 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 696

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 697 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 726

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022938442.1 (probable RNA helicase SDE3 isoform X4 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 476 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 535

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 536 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 595

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 596 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 655

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 656 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 685

BLAST of Bhi12G001004 vs. ExPASy TrEMBL
Match: A0A6J1JVI0 (probable RNA helicase SDE3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489245 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.9e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 453 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 512

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 513 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 572

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 573 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 632

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 633 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 662

BLAST of Bhi12G001004 vs. ExPASy TrEMBL
Match: A0A6J1JVH4 (probable RNA helicase SDE3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489245 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.9e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 458 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 517

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 518 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 577

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 578 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 637

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 638 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 667

BLAST of Bhi12G001004 vs. ExPASy TrEMBL
Match: A0A6J1JRY3 (probable RNA helicase SDE3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489245 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.9e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 400 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 459

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 460 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 519

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 520 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 579

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 580 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 609

BLAST of Bhi12G001004 vs. ExPASy TrEMBL
Match: A0A6J1FJT2 (uncharacterized protein LOC111444680 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444680 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 534 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 593

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 594 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 653

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 654 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 713

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 714 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 743

BLAST of Bhi12G001004 vs. ExPASy TrEMBL
Match: A0A6J1FE36 (probable RNA helicase SDE3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444680 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0

Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 529 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 588

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 589 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 648

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 649 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 708

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 709 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 738

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G05460.13.0e-2332.60P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
Match NameE-valueIdentityDescription
Q8GYD94.2e-2232.60Probable RNA helicase SDE3 OS=Arabidopsis thaliana OX=3702 GN=SDE3 PE=1 SV=1[more]
Q0V8H62.0e-1633.13Putative helicase MOV-10 OS=Bos taurus OX=9913 GN=MOV10 PE=2 SV=1[more]
Q5ZKD75.9e-1629.11Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1[more]
Q9BXT62.9e-1530.57RNA helicase Mov10l1 OS=Homo sapiens OX=9606 GN=MOV10L1 PE=2 SV=1[more]
Q9HCE12.9e-1532.50Helicase MOV-10 OS=Homo sapiens OX=9606 GN=MOV10 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
XP_022993134.16.0e-7468.87probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993136.1 probabl... [more]
XP_022993138.16.0e-7468.87probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993139.1 probabl... [more]
XP_022993142.16.0e-7468.87probable RNA helicase SDE3 isoform X3 [Cucurbita maxima][more]
XP_022938441.12.1e-7167.45probable RNA helicase SDE3 isoform X3 [Cucurbita moschata][more]
XP_022938442.12.1e-7167.45probable RNA helicase SDE3 isoform X4 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1JVI02.9e-7468.87probable RNA helicase SDE3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148924... [more]
A0A6J1JVH42.9e-7468.87probable RNA helicase SDE3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148924... [more]
A0A6J1JRY32.9e-7468.87probable RNA helicase SDE3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11148924... [more]
A0A6J1FJT21.0e-7167.45uncharacterized protein LOC111444680 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FE361.0e-7167.45probable RNA helicase SDE3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..195
e-value: 8.1E-15
score: 57.0
IPR045055DNA2/NAM7-like helicasePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 3..191
NoneNo IPR availablePANTHERPTHR10887:SF440RNA HELICASE SDE3-RELATEDcoord: 3..191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001004Bhi12M001004mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular anatomical structure