Bhi12G000852 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000852
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 29714701 .. 29714871 (-)
RNA-Seq ExpressionBhi12G000852
SyntenyBhi12G000852
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAATGTATAAGCCCATGCCTCTTGAATCTTTGTATGTTATGAATGAAGTAGAGAAACCTGCTGTTGAGCTAAAACAATTGCCTACTCATCTGAAATATGCTTTTTTAGATGATTCTTCCTTTCTTCCTGTCGTCACTATACTTTCCATACTTTTAGACATTTTGACTCA

mRNA sequence

TAAAATGTATAAGCCCATGCCTCTTGAATCTTTGTATGTTATGAATGAAGTAGAGAAACCTGCTGTTGAGCTAAAACAATTGCCTACTCATCTGAAATATGCTTTTTTAGATGATTCTTCCTTTCTTCCTGTCGTCACTATACTTTCCATACTTTTAGACATTTTGACTCA

Coding sequence (CDS)

TAAAATGTATAAGCCCATGCCTCTTGAATCTTTGTATGTTATGAATGAAGTAGAGAAACCTGCTGTTGAGCTAAAACAATTGCCTACTCATCTGAAATATGCTTTTTTAGATGATTCTTCCTTTCTTCCTGTCGTCACTATACTTTCCATACTTTTAGACATTTTGACTCA

Protein sequence

KMYKPMPLESLYVMNEVEKPAVELKQLPTHLKYAFLDDSSFLPVVTILSILLDILT
Homology
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BLAST of Bhi12G000852 vs. NCBI nr
Match: WP_217833150.1 (reverse transcriptase family protein [Synechococcus sp. PCC 7002])

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 1   KMYKPMPLESLYVMNEVEKPAVELKQLPTHLKYAFLDDSSFLPVV 46
           K+ KP+PL  L+V+N++EKP +ELK LP HLKYAFLDD S LPV+
Sbjct: 328 KIDKPIPLAPLHVVNDIEKPKLELKVLPLHLKYAFLDDLSSLPVI 372

The following BLAST results are available for this feature:
BLAST of Bhi12G000852 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000852 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000852 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_217833150.11.4e-0664.44reverse transcriptase family protein [Synechococcus sp. PCC 7002][more]
BLAST of Bhi12G000852 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000852Bhi12M000852mRNA