Bhi12G000654 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000654
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protein of unknown function (DUF1218)
Location	chr12: 22221993 .. 22222651 (+)
RNA-Seq Expression	Bhi12G000654
Synteny	Bhi12G000654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATATTGTTCAGTGGTCATCCTATTATTTTGAAGGGGAGGTAATGTTGCACCTCAGTTTGTTGAGGGATGCCATTGATGAAGTCCGGCATAGCCATTGCCAGAAATAAACATATTTTACTTTAGCTATTTTGCTCTTTTTCTCCTCTCTATCCTCGCCCAAGTCAGAACATGCTGCGAATGATGTTTCTGTATGCTATAGAATATCTTTAAATTTATTACACGGTCCTACACATTTTGAGTAATTTAAGTTCATAATTTTGTATGTTGTACTCCATTACTTCATGTCTTAGTGTCATAATCCGTGCTGCATTCTCAGGTTCAGTTTCGTTATCGCCTTCTTGTTATTGCTGACTGGTGCTGCCCTTAACGATCAGCATGGTGGAGGGACCATGTACTTCGGTAACTATTACTATTACTGTTACGTCGTGAAACCTGGAGTCTTTGCTGGAGGCGCCGTTCTGTCACTTGCAAGTGTTTTATTAGCAATAGTCTATTACCTCACTTTAAATTTGGCAAAAAACAATAGCCCTTTGTGGGGGAATCCTGTTCCAGCTCAAGGGATTGCTTTGGGGCAGCCTCAGTTTCCACCACAAAATACTCAGCAACCCGTTTTTGTTCATGAAGACACGTATGCTCGACGACAGTATGCTTGA

mRNA sequence

ATGGGTATATTGTTCAGTGGTCATCCTATTATTTTGAAGGGGAGGTTCAGTTTCGTTATCGCCTTCTTGTTATTGCTGACTGGTGCTGCCCTTAACGATCAGCATGGTGGAGGGACCATGTACTTCGGTAACTATTACTATTACTGTTACGTCGTGAAACCTGGAGTCTTTGCTGGAGGCGCCGTTCTGTCACTTGCAAGTGTTTTATTAGCAATAGTCTATTACCTCACTTTAAATTTGGCAAAAAACAATAGCCCTTTGTGGGGGAATCCTGTTCCAGCTCAAGGGATTGCTTTGGGGCAGCCTCAGTTTCCACCACAAAATACTCAGCAACCCGTTTTTGTTCATGAAGACACGTATGCTCGACGACAGTATGCTTGA

Coding sequence (CDS)

ATGGGTATATTGTTCAGTGGTCATCCTATTATTTTGAAGGGGAGGTTCAGTTTCGTTATCGCCTTCTTGTTATTGCTGACTGGTGCTGCCCTTAACGATCAGCATGGTGGAGGGACCATGTACTTCGGTAACTATTACTATTACTGTTACGTCGTGAAACCTGGAGTCTTTGCTGGAGGCGCCGTTCTGTCACTTGCAAGTGTTTTATTAGCAATAGTCTATTACCTCACTTTAAATTTGGCAAAAAACAATAGCCCTTTGTGGGGGAATCCTGTTCCAGCTCAAGGGATTGCTTTGGGGCAGCCTCAGTTTCCACCACAAAATACTCAGCAACCCGTTTTTGTTCATGAAGACACGTATGCTCGACGACAGTATGCTTGA

Protein sequence

MGILFSGHPIILKGRFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA

Homology

[Close]

BLAST of Bhi12G000654 vs. TAIR 10
Match: AT5G17210.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           F+FVIAFL+LL+GAALND+H   +M  G   Y+CY+VKPGVF+ GAVLSL ++ L IVYY
Sbjct: 104 FTFVIAFLVLLSGAALNDEHTEESMNAGT--YFCYIVKPGVFSTGAVLSLVTIALGIVYY 163

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 126
           L   L  N   +        GIA+GQPQ  P+  + PVFVHEDTY RRQ+
Sbjct: 164 LC--LTSNKQIVAATTTQGTGIAMGQPQI-PERVEDPVFVHEDTYMRRQF 208

[Close]

BLAST of Bhi12G000654 vs. TAIR 10
Match: AT5G17210.2 (Protein of unknown function (DUF1218) )

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           F+FVIAFL+LL+GAALND+H   +M  G   Y+CY+VKPGVF+ GAVLSL ++ L IVYY
Sbjct: 70  FTFVIAFLVLLSGAALNDEHTEESMNAGT--YFCYIVKPGVFSTGAVLSLVTIALGIVYY 129

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 126
           L   L  N   +        GIA+GQPQ  P+  + PVFVHEDTY RRQ+
Sbjct: 130 LC--LTSNKQIVAATTTQGTGIAMGQPQI-PERVEDPVFVHEDTYMRRQF 174

[Close]

BLAST of Bhi12G000654 vs. NCBI nr
Match: XP_038874324.1 (uncharacterized protein LOC120067025 [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA
Sbjct: 161 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 211

[Close]

BLAST of Bhi12G000654 vs. NCBI nr
Match: KAA0055113.1 (uncharacterized protein E6C27_scaffold231G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 7.6e-56
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 11  ILKGRFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLL 70
           +L+  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGA+LSLASVLL
Sbjct: 1   MLRRMFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAILSLASVLL 60

Query: 71  AIVYYLTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           AIVYYLTLNLAK NSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA
Sbjct: 61  AIVYYLTLNLAKTNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 116

[Close]

BLAST of Bhi12G000654 vs. NCBI nr
Match: KAG6605662.1 (Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYY
Sbjct: 95  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 154

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHED YARRQYA
Sbjct: 155 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDVYARRQYA 205

[Close]

BLAST of Bhi12G000654 vs. NCBI nr
Match: XP_022969754.1 (uncharacterized protein LOC111468857 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 126
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY
Sbjct: 161 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 210

[Close]

BLAST of Bhi12G000654 vs. NCBI nr
Match: XP_023532125.1 (uncharacterized protein LOC111794385 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHED YARRQYA
Sbjct: 161 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL
Match: A0A5A7UGP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00390 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 11  ILKGRFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLL 70
           +L+  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGA+LSLASVLL
Sbjct: 1   MLRRMFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAILSLASVLL 60

Query: 71  AIVYYLTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           AIVYYLTLNLAK NSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA
Sbjct: 61  AIVYYLTLNLAKTNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 116

[Close]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL
Match: A0A6J1I3K6 (uncharacterized protein LOC111468857 OS=Cucurbita maxima OX=3661 GN=LOC111468857 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 126
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY
Sbjct: 161 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQY 210

[Close]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL
Match: A0A6J1H3L5 (uncharacterized protein LOC111459709 OS=Cucurbita moschata OX=3662 GN=LOC111459709 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHED YARRQYA
Sbjct: 161 LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL
Match: A0A0A0KRK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168970 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGA+LSLASVLLAIVYY
Sbjct: 101 FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGN  PAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA
Sbjct: 161 LTLNLAKNNSPLWGNSAPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 211

[Close]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL
Match: A0A6J1DXZ3 (uncharacterized protein LOC111025191 OS=Momordica charantia OX=3673 GN=LOC111025191 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYY 75
           FSF+IAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGA+LSLASVLLAIVYY
Sbjct: 101 FSFIIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYY 160

Query: 76  LTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDTYARRQYA 127
           LTLNLAKNNSPLWGNP P+QGIALGQPQFPPQNTQQPVFVHEDTY RRQYA
Sbjct: 161 LTLNLAKNNSPLWGNPAPSQGIALGQPQFPPQNTQQPVFVHEDTYVRRQYA 211

The following BLAST results are available for this feature:

BLAST of Bhi12G000654 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17210.1	2.5e-25	55.45	Protein of unknown function (DUF1218)	[more]
AT5G17210.2	2.5e-25	55.45	Protein of unknown function (DUF1218)	[more]

BLAST of Bhi12G000654 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi12G000654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874324.1	3.4e-56	100.00	uncharacterized protein LOC120067025 [Benincasa hispida]	[more]
KAA0055113.1	7.6e-56	94.83	uncharacterized protein E6C27_scaffold231G00390 [Cucumis melo var. makuwa]	[more]
KAG6605662.1	3.8e-55	98.20	Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969754.1	3.8e-55	99.09	uncharacterized protein LOC111468857 [Cucurbita maxima]	[more]
XP_023532125.1	3.8e-55	98.20	uncharacterized protein LOC111794385 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi12G000654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGP4	3.7e-56	94.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1I3K6	1.8e-55	99.09	uncharacterized protein LOC111468857 OS=Cucurbita maxima OX=3661 GN=LOC111468857...	[more]
A0A6J1H3L5	1.8e-55	98.20	uncharacterized protein LOC111459709 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]
A0A0A0KRK6	5.3e-55	97.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168970 PE=4 SV=1	[more]
A0A6J1DXZ3	5.3e-55	95.50	uncharacterized protein LOC111025191 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 16..69 e-value: 3.2E-12 score: 46.7
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 16..113
None	No IPR available	PANTHER	PTHR31769:SF59	PROTEIN, PUTATIVE (DUF1218)-RELATED	coord: 16..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000654	Bhi12M000654	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane