Bhi12G000568 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000568
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein PSY2
Locationchr12: 19686046 .. 19687321 (+)
RNA-Seq ExpressionBhi12G000568
SyntenyBhi12G000568
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATATGAATAGTAGGCAGAGTTGACTTTAATGGTTGTGGGCAAAAGTTAATGCACTAAATCATCATTCTGTAGCTATTGGGGGGAAGCACCATGAAAATAGCTTCTCAATTTCTCTCCAATTTCCTTTGTGGAATTAAGGATAAAAGCCTAACTTCTCATGCCTTATTCCCCTACCCTTTGCTTCTTACAAATTCACTTCCCCTTTCTCTCAAGATTATTCAACACAACACAATGTCCCTAAAACTTAAATTCTTTCTTCTCCTTCTCCTTTCCATCTCCATTCCTTCCTCATCAGGTAACCTACTTCTACCTACTTTCTTTTGTTCAGTTTCATAATCTCGTCGTCTCAATGAATGATGCTAATATATATGTTTTCTTCGTTTAGCGATGGTTGAACCACTTCGAGACATCAAGATTACAGAGAAGTCGATCATCAAGGTATTATAGTGTTTTTTAGAAGAGAGAAAAAAGTAAACAACGAAAATACTAGCGCAAGTAGTTTCCATAAGTTCTATTTTATAAACAAAATTACATCAAATAGATCCTGAGATATTTTTCTTGTTAGTCAAATAATAAACTTATGCTCCAATGAACTATATCTTAGCTAGTTTCATGTTACTAAATGGTTGAGTTCTATTTTTTCTCCTCTAATGTGCAAAAGGTCGGTAGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAGGACTATGATGAGACAAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGAGATAGCCTCTCTTTAGCTTATGGTTTAAATAACATTAAAACACTTCTATTTTCCTTCACCAAGATAATGAACATGGTATGTGTGGATCGAGAGTGTATATTAGCCTGCTAAGATGAGGAAATCTTTGGATAAAGTAAGGCTTTTTTAATTCTTTTTTTCAATTTCACTTCCTTATTATGCTTCTACTGCTATTGGCTTTGATTATCACTCAGGGCCAAGTCTGAGCTTTGTGGTTATGTTTGAGCAGTTCTTTTATGTGTCAAATATCAATGATGAGCTATAGTTTAAGTTCAAATGCTTCATGGTTGCATGATTGAAGCTTGCTGATGGGTCCAATAAGTCACTAAAAAGAAATAAACAGAATTGGAGAGAGATAAAAACTAATAAGACAGATAAGAAGAGAATTAAAAAAGATTCAAGTGGTTTAGATGGATAGAAACAGAATTGGAGAGATTGTAAGCTTAAACCAAGACAGATAAAAACAGAATAAGAG

mRNA sequence

CCAAAATATGAATAGTAGGCAGAGTTGACTTTAATGGTTGTGGGCAAAAGTTAATGCACTAAATCATCATTCTGTAGCTATTGGGGGGAAGCACCATGAAAATAGCTTCTCAATTTCTCTCCAATTTCCTTTGTGGAATTAAGGATAAAAGCCTAACTTCTCATGCCTTATTCCCCTACCCTTTGCTTCTTACAAATTCACTTCCCCTTTCTCTCAAGATTATTCAACACAACACAATGTCCCTAAAACTTAAATTCTTTCTTCTCCTTCTCCTTTCCATCTCCATTCCTTCCTCATCAGCGATGGTTGAACCACTTCGAGACATCAAGATTACAGAGAAGTCGATCATCAAGGTCGGTAGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAGGACTATGATGAGACAAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGAGATAGCCTCTCTTTAGCTTATGGTTTAAATAACATTAAAACACTTCTATTTTCCTTCACCAAGATAATGAACATGGTATGTGTGGATCGAGAGTGTATATTAGCCTGCTAAGATGAGGAAATCTTTGGATAAAGTAAGGCTTTTTTAATTCTTTTTTTCAATTTCACTTCCTTATTATGCTTCTACTGCTATTGGCTTTGATTATCACTCAGGGCCAAGTCTGAGCTTTGTGGTTATGTTTGAGCAGTTCTTTTATGTGTCAAATATCAATGATGAGCTATAGTTTAAGTTCAAATGCTTCATGGTTGCATGATTGAAGCTTGCTGATGGGTCCAATAAGTCACTAAAAAGAAATAAACAGAATTGGAGAGAGATAAAAACTAATAAGACAGATAAGAAGAGAATTAAAAAAGATTCAAGTGGTTTAGATGGATAGAAACAGAATTGGAGAGATTGTAAGCTTAAACCAAGACAGATAAAAACAGAATAAGAG

Coding sequence (CDS)

ATGAAAATAGCTTCTCAATTTCTCTCCAATTTCCTTTGTGGAATTAAGGATAAAAGCCTAACTTCTCATGCCTTATTCCCCTACCCTTTGCTTCTTACAAATTCACTTCCCCTTTCTCTCAAGATTATTCAACACAACACAATGTCCCTAAAACTTAAATTCTTTCTTCTCCTTCTCCTTTCCATCTCCATTCCTTCCTCATCAGCGATGGTTGAACCACTTCGAGACATCAAGATTACAGAGAAGTCGATCATCAAGGTCGGTAGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAGGACTATGATGAGACAAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGA

Protein sequence

MKIASQFLSNFLCGIKDKSLTSHALFPYPLLLTNSLPLSLKIIQHNTMSLKLKFFLLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDETKANNRHDPKKPGNGKP
Homology
BLAST of Bhi12G000568 vs. NCBI nr
Match: XP_038906524.1 (protein PSY2-like [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 8.3e-31
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 48  MSLKLKFFLLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDE 107
           MSLKLKFFLLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDE
Sbjct: 1   MSLKLKFFLLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDE 60

Query: 108 TKANNRHDPKKPGNGKP 125
           TKANNRHDPKKPGNGKP
Sbjct: 61  TKANNRHDPKKPGNGKP 77

BLAST of Bhi12G000568 vs. NCBI nr
Match: KGN49855.1 (hypothetical protein Csa_000412 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21
Identity = 65/79 (82.28%), Postives = 67/79 (84.81%), Query Frame = 0

Query: 48  MSLK-LKFFLLLLLSISIPSSSAM-VEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDY 107
           MSLK LKFFLL LLSISIP SS M VEPLRD  I  KSI K+G IQMN RKLMTLD+QDY
Sbjct: 1   MSLKVLKFFLLFLLSISIPFSSGMVVEPLRDDMIAYKSIFKMGGIQMNGRKLMTLDLQDY 60

Query: 108 DETKANNRHDPKKPGNGKP 125
           DETKANNRHDPKKPGNGKP
Sbjct: 61  DETKANNRHDPKKPGNGKP 79

BLAST of Bhi12G000568 vs. NCBI nr
Match: XP_022138250.1 (protein PSY2 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 48  MSLKLKFFLLLLLSI--SIPSSSAMVEPLRDIKITEKSIIKVGS-IQMNARKLMTLDVQD 107
           MSLKLK  LLLLL +   +P SS M +PLRD KI +KSI KVG  IQMNARKLMTLD+QD
Sbjct: 1   MSLKLKSLLLLLLFLIFVLPFSSGMDKPLRDTKIADKSIFKVGGIIQMNARKLMTLDIQD 60

Query: 108 YDETKANNRHDPKKPGNGKP 125
           YDETKANNRHDPKKPGNGKP
Sbjct: 61  YDETKANNRHDPKKPGNGKP 80

BLAST of Bhi12G000568 vs. NCBI nr
Match: XP_023550102.1 (protein PSY2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19
Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 48  MSLKLKFF--LLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDY 107
           MS  LKFF  LLLLLSIS+P SS MVE +RD+K+ +K+I  VG + MN RKLM LD++DY
Sbjct: 1   MSPSLKFFLLLLLLLSISVPFSSGMVESVRDVKVADKAIYMVGGVGMNGRKLMRLDIEDY 60

Query: 108 DETKANNRHDPKKPGNGKP 125
           D+TKANNRHDPKKPGNGKP
Sbjct: 61  DDTKANNRHDPKKPGNGKP 79

BLAST of Bhi12G000568 vs. NCBI nr
Match: XP_022922224.1 (protein PSY2-like [Cucurbita moschata])

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-18
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 48  MSLKLKFF--LLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDY 107
           MS  LKFF  LLLLLSIS+P SS +VE  R++K+T+K I  VG + MN RKLM LDV+DY
Sbjct: 1   MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVIYMVGGVGMNGRKLMRLDVEDY 60

Query: 108 DETKANNRHDPKKPGNGKP 125
           D+TKANNRHDPKKPGNGKP
Sbjct: 61  DDTKANNRHDPKKPGNGKP 79

BLAST of Bhi12G000568 vs. ExPASy TrEMBL
Match: A0A0A0KJF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139330 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21
Identity = 65/79 (82.28%), Postives = 67/79 (84.81%), Query Frame = 0

Query: 48  MSLK-LKFFLLLLLSISIPSSSAM-VEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDY 107
           MSLK LKFFLL LLSISIP SS M VEPLRD  I  KSI K+G IQMN RKLMTLD+QDY
Sbjct: 1   MSLKVLKFFLLFLLSISIPFSSGMVVEPLRDDMIAYKSIFKMGGIQMNGRKLMTLDLQDY 60

Query: 108 DETKANNRHDPKKPGNGKP 125
           DETKANNRHDPKKPGNGKP
Sbjct: 61  DETKANNRHDPKKPGNGKP 79

BLAST of Bhi12G000568 vs. ExPASy TrEMBL
Match: A0A6J1C8Y2 (protein PSY2 OS=Momordica charantia OX=3673 GN=LOC111009471 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.3e-20
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 48  MSLKLKFFLLLLLSI--SIPSSSAMVEPLRDIKITEKSIIKVGS-IQMNARKLMTLDVQD 107
           MSLKLK  LLLLL +   +P SS M +PLRD KI +KSI KVG  IQMNARKLMTLD+QD
Sbjct: 1   MSLKLKSLLLLLLFLIFVLPFSSGMDKPLRDTKIADKSIFKVGGIIQMNARKLMTLDIQD 60

Query: 108 YDETKANNRHDPKKPGNGKP 125
           YDETKANNRHDPKKPGNGKP
Sbjct: 61  YDETKANNRHDPKKPGNGKP 80

BLAST of Bhi12G000568 vs. ExPASy TrEMBL
Match: A0A6J1E2S8 (protein PSY2-like OS=Cucurbita moschata OX=3662 GN=LOC111430273 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 48  MSLKLKFF--LLLLLSISIPSSSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDY 107
           MS  LKFF  LLLLLSIS+P SS +VE  R++K+T+K I  VG + MN RKLM LDV+DY
Sbjct: 1   MSPSLKFFLLLLLLLSISVPFSSGVVESGRNVKVTDKVIYMVGGVGMNGRKLMRLDVEDY 60

Query: 108 DETKANNRHDPKKPGNGKP 125
           D+TKANNRHDPKKPGNGKP
Sbjct: 61  DDTKANNRHDPKKPGNGKP 79

BLAST of Bhi12G000568 vs. ExPASy TrEMBL
Match: A0A5D3C6H5 (Putative Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00390 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 70  MVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDETKANNRHDPKKPGNGKP 125
           +VE L+D  I +KS  K+G +QMN RKLMTLDVQDYDETKANNRHDPKKPGNGKP
Sbjct: 2   VVESLQDGNIADKSAFKIGGVQMNGRKLMTLDVQDYDETKANNRHDPKKPGNGKP 56

BLAST of Bhi12G000568 vs. ExPASy TrEMBL
Match: A0A6J1H1E3 (uncharacterized protein LOC111459477 OS=Cucurbita moschata OX=3662 GN=LOC111459477 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.7e-10
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 0

Query: 52  LKFFLLLLLSISIPS--SSAMVEPLRDIKITEKSIIKVGSIQMNARKLMTLDVQDYDETK 111
           +K FLLLLL I +    SS MV+PL D++I + SI KV   Q+ ARKL  LD+ DYD+ +
Sbjct: 6   IKSFLLLLLLIFVVELFSSGMVDPLVDVEIADNSIFKVYGFQLKARKL-ALDI-DYDDPR 65

Query: 112 ANNRHDPKKPGNGKP 125
           ANNRHDPK+PGNGKP
Sbjct: 66  ANNRHDPKRPGNGKP 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038906524.18.3e-31100.00protein PSY2-like [Benincasa hispida][more]
KGN49855.12.1e-2182.28hypothetical protein Csa_000412 [Cucumis sativus][more]
XP_022138250.11.9e-1976.25protein PSY2 [Momordica charantia][more]
XP_023550102.13.3e-1969.62protein PSY2-like [Cucurbita pepo subsp. pepo][more]
XP_022922224.16.2e-1869.62protein PSY2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A0A0KJF21.0e-2182.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139330 PE=4 SV=1[more]
A0A6J1C8Y29.3e-2076.25protein PSY2 OS=Momordica charantia OX=3673 GN=LOC111009471 PE=4 SV=1[more]
A0A6J1E2S83.0e-1869.62protein PSY2-like OS=Cucurbita moschata OX=3662 GN=LOC111430273 PE=4 SV=1[more]
A0A5D3C6H51.5e-1476.36Putative Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase OS=Cu... [more]
A0A6J1H1E36.7e-1058.67uncharacterized protein LOC111459477 OS=Cucurbita moschata OX=3662 GN=LOC1114594... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..124
NoneNo IPR availablePANTHERPTHR34467TRANSMEMBRANE PROTEINcoord: 48..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000568Bhi12M000568mRNA