Bhi12G000547 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000547
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 19066080 .. 19066328 (+)
RNA-Seq ExpressionBhi12G000547
SyntenyBhi12G000547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCACGAGTTGCTGACACTGATGTCCACCCTAATCGAATATCAGTATGTACAGTACAAGTAACACAGAAATGCAACAAAACTGAGATCATGAAGATGGGGACATTGGCAGATAGATGGGTAATAAGAGAAGTCAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGAGATACCTTGTGATGAAACGGCAGAGAAACCTAAAACACAGGACGCCACCAAGAAATAA

mRNA sequence

ATGTATGCACGAGTTGCTGACACTGATGTCCACCCTAATCGAATATCAGTATGTACAGTACAAGTAACACAGAAATGCAACAAAACTGAGATCATGAAGATGGGGACATTGGCAGATAGATGGGTAATAAGAGAAGTCAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGAGATACCTTGTGATGAAACGGCAGAGAAACCTAAAACACAGGACGCCACCAAGAAATAA

Coding sequence (CDS)

ATGTATGCACGAGTTGCTGACACTGATGTCCACCCTAATCGAATATCAGTATGTACAGTACAAGTAACACAGAAATGCAACAAAACTGAGATCATGAAGATGGGGACATTGGCAGATAGATGGGTAATAAGAGAAGTCAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGAGATACCTTGTGATGAAACGGCAGAGAAACCTAAAACACAGGACGCCACCAAGAAATAA

Protein sequence

MYARVADTDVHPNRISVCTVQVTQKCNKTEIMKMGTLADRWVIREVSNACMSAQMELFDVKQSEIPCDETAEKPKTQDATKK
Homology
[Close]
BLAST of Bhi12G000547 vs. NCBI nr
Match: KGN49877.1 (hypothetical protein Csa_000168 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 28 KTEIMKMGTLADRWVIREVSNACMSAQMELFDVKQSEIPCDETA 72
          + +IMK+ TLAD+W IR  SNACMSAQMELFDVKQS+    ET+
Sbjct: 3  QADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETS 46

[Close]
BLAST of Bhi12G000547 vs. ExPASy TrEMBL
Match: A0A0A0KN96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139550 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.6e-06
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 28 KTEIMKMGTLADRWVIREVSNACMSAQMELFDVKQSEIPCDETA 72
          + +IMK+ TLAD+W IR  SNACMSAQMELFDVKQS+    ET+
Sbjct: 3  QADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETS 46

The following BLAST results are available for this feature:
BLAST of Bhi12G000547 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000547 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000547 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49877.11.4e-0565.91hypothetical protein Csa_000168 [Cucumis sativus][more]
BLAST of Bhi12G000547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN966.6e-0665.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139550 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000547Bhi12M000547mRNA