Bhi12G000362 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000362
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCytochrome c oxidase subunit 1
Locationchr12: 12848475 .. 12848647 (-)
RNA-Seq ExpressionBhi12G000362
SyntenyBhi12G000362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCGGCGGCGTTCTTGAATGAAGTCGAGACGAACCGAATTAGCACTTCTCAGATCAGGCTAGGCCTCTCCAGTGAAGCTGGGCACCGGGGCCCTGGATGCGCTAGAGATCAGCACATAGGGGGGTGGTTGCCTGTGTTTCTCGGCGACATCATACCAAAGTCGTACAATTAG

mRNA sequence

GGGCGGCGGCGTTCTTGAATGAAGTCGAGACGAACCGAATTAGCACTTCTCAGATCAGGCTAGGCCTCTCCAGTGAAGCTGGGCACCGGGGCCCTGGATGCGCTAGAGATCAGCACATAGGGGGGTGGTTGCCTGTGTTTCTCGGCGACATCATACCAAAGTCGTACAATTAG

Coding sequence (CDS)

GGGCGGCGGCGTTCTTGAATGAAGTCGAGACGAACCGAATTAGCACTTCTCAGATCAGGCTAGGCCTCTCCAGTGAAGCTGGGCACCGGGGCCCTGGATGCGCTAGAGATCAGCACATAGGGGGGTGGTTGCCTGTGTTTCTCGGCGACATCATACCAAAGTCGTACAATTAG

Protein sequence

AAAFLNEVETNRISTSQIRLGLSSEAGHRGPGCARDQHIGGWLPVFLGDIIPKSYN
Homology
[Close]
BLAST of Bhi12G000362 vs. NCBI nr
Match: KVI11367.1 (cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus])

HSP 1 Score: 60.5 bits (145), Expect = 5.5e-06
Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 1   AAAFLNEVETNRISTSQIRLGLSSEAGHRGPGCARDQHIGGWLPVFLG 49
           AAAFLN+V  NRI+TS IR GL S AGHR PGC  + HI   LP FLG
Sbjct: 186 AAAFLNKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEESLPGFLG 233

[Close]
BLAST of Bhi12G000362 vs. ExPASy TrEMBL
Match: A0A103YLM2 (Cytochrome c oxidase subunit 1 OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_010223 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 1   AAAFLNEVETNRISTSQIRLGLSSEAGHRGPGCARDQHIGGWLPVFLG 49
           AAAFLN+V  NRI+TS IR GL S AGHR PGC  + HI   LP FLG
Sbjct: 186 AAAFLNKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEESLPGFLG 233

The following BLAST results are available for this feature:
BLAST of Bhi12G000362 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000362 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000362 vs. NCBI nr
Match NameE-valueIdentityDescription
KVI11367.15.5e-0664.58cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus][more]
BLAST of Bhi12G000362 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A103YLM22.7e-0664.58Cytochrome c oxidase subunit 1 OS=Cynara cardunculus var. scolymus OX=59895 GN=C... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000362Bhi12M000362mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006091 generation of precursor metabolites and energy
cellular_component GO:0016020 membrane