Bhi12G000215 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000215
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 7085531 .. 7085776 (+)
RNA-Seq ExpressionBhi12G000215
SyntenyBhi12G000215
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTCATCGTCTAAACTTCCATCTTGCCATCGTCATCATCGGACTTCTCATCATCATCGGCCAAGTCTCGGCGGCCACTACTTCTGATCACAGTAAGAGCATTTTTTATCGACGTTTTGGAGGAATAATATTTAAAGAGAATAAGATGGGTGGCGGCGATGCTGGTAGTGTTTTTGAAGGTTCTCTACACCTAGTTCCAGGAGGTCCAAACCCTCTTCATCCTTCATCTTCTCTACTCTAA

mRNA sequence

ATGGCGGCTCATCGTCTAAACTTCCATCTTGCCATCGTCATCATCGGACTTCTCATCATCATCGGCCAAGTCTCGGCGGCCACTACTTCTGATCACAGTAAGAGCATTTTTTATCGACGTTTTGGAGGAATAATATTTAAAGAGAATAAGATGGGTGGCGGCGATGCTGGTAGTGTTTTTGAAGGTTCTCTACACCTAGTTCCAGGAGGTCCAAACCCTCTTCATCCTTCATCTTCTCTACTCTAA

Coding sequence (CDS)

ATGGCGGCTCATCGTCTAAACTTCCATCTTGCCATCGTCATCATCGGACTTCTCATCATCATCGGCCAAGTCTCGGCGGCCACTACTTCTGATCACAGTAAGAGCATTTTTTATCGACGTTTTGGAGGAATAATATTTAAAGAGAATAAGATGGGTGGCGGCGATGCTGGTAGTGTTTTTGAAGGTTCTCTACACCTAGTTCCAGGAGGTCCAAACCCTCTTCATCCTTCATCTTCTCTACTCTAA

Protein sequence

MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAGSVFEGSLHLVPGGPNPLHPSSSLL
Homology
[Close]
BLAST of Bhi12G000215 vs. NCBI nr
Match: KAA0042785.1 (hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.4e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSA-ATTSDHSKSIFYRRFGGIIFKENKMGGGDA--G 60
          MAAHRLN HL + IIGLLI+I  VSA  TTSD  KSIF RRFGGIIF + K+GGG +  G
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 72

Query: 61 SVFEGSLHLVPGGPNPLH 76
           VF+ SLHLVP GP+P+H
Sbjct: 73 DVFKDSLHLVPEGPDPIH 90

[Close]
BLAST of Bhi12G000215 vs. NCBI nr
Match: KGN50130.1 (hypothetical protein Csa_000151 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-16
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAG--- 60
          MAAH LN HL++ IIGLLII+G VSA TTSD +K+ FYRRF  +IF   K+GGG  G   
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAVTTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNNN 60

Query: 61 -SVFEGSLHLVPGGPNPLH 76
           +VF GSLHLVP GP+ LH
Sbjct: 61 ANVFGGSLHLVPNGPDALH 79

[Close]
BLAST of Bhi12G000215 vs. NCBI nr
Match: KAA0039672.1 (hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 53/80 (66.25%), Postives = 59/80 (73.75%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAGSVF 60
          MAAHRLNFHLAIVIIGLLI++G V+A  TSDH+K  FYRRFG +I+KE  MGG   G VF
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTATITSDHNKINFYRRFGRMIYKEKNMGGYHDG-VF 60

Query: 61 EGSLHLVPGGPNPLHPSSSL 81
           GSL  VP  P    PSSSL
Sbjct: 61 GGSLTQVPAEPG---PSSSL 76

[Close]
BLAST of Bhi12G000215 vs. NCBI nr
Match: KAE8647866.1 (hypothetical protein Csa_000489, partial [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 5.7e-12
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAG 58
          MAAHRLN HL++ IIGLLI++G VSA TTSD +KSIFYRRFGG++F + K+ GGD G
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNK-KVSGGDGG 56

[Close]
BLAST of Bhi12G000215 vs. ExPASy TrEMBL
Match: A0A0A0KQY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAG--- 60
          MAAHRLN HL++ IIGLLI++G VSA TTSD +KSIFYRRFGG++F + K+ GGD G   
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNK-KVSGGDGGGHN 60

Query: 61 --SVFEGSLHLVPGGPNPLH 76
            +VF GSLHLVP  PNPLH
Sbjct: 61 DANVFGGSLHLVPNSPNPLH 79

[Close]
BLAST of Bhi12G000215 vs. ExPASy TrEMBL
Match: A0A5A7TN00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002880 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSA-ATTSDHSKSIFYRRFGGIIFKENKMGGGDA--G 60
          MAAHRLN HL + IIGLLI+I  VSA  TTSD  KSIF RRFGGIIF + K+GGG +  G
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVGGGGSRDG 72

Query: 61 SVFEGSLHLVPGGPNPLH 76
           VF+ SLHLVP GP+P+H
Sbjct: 73 DVFKDSLHLVPEGPDPIH 90

[Close]
BLAST of Bhi12G000215 vs. ExPASy TrEMBL
Match: A0A0A0KKB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.3e-17
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAG--- 60
          MAAH LN HL++ IIGLLII+G VSA TTSD +K+ FYRRF  +IF   K+GGG  G   
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAVTTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNNN 60

Query: 61 -SVFEGSLHLVPGGPNPLH 76
           +VF GSLHLVP GP+ LH
Sbjct: 61 ANVFGGSLHLVPNGPDALH 79

[Close]
BLAST of Bhi12G000215 vs. ExPASy TrEMBL
Match: A0A5A7T872 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00020 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.0e-16
Identity = 53/80 (66.25%), Postives = 59/80 (73.75%), Query Frame = 0 

Query: 1  MAAHRLNFHLAIVIIGLLIIIGQVSAATTSDHSKSIFYRRFGGIIFKENKMGGGDAGSVF 60
          MAAHRLNFHLAIVIIGLLI++G V+A  TSDH+K  FYRRFG +I+KE  MGG   G VF
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTATITSDHNKINFYRRFGRMIYKEKNMGGYHDG-VF 60

Query: 61 EGSLHLVPGGPNPLHPSSSL 81
           GSL  VP  P    PSSSL
Sbjct: 61 GGSLTQVPAEPG---PSSSL 76

The following BLAST results are available for this feature:
BLAST of Bhi12G000215 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000215 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000215 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042785.13.4e-1766.67hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa][more]
KGN50130.11.3e-1662.03hypothetical protein Csa_000151 [Cucumis sativus][more]
KAA0039672.11.4e-1566.25hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa][more]
KAE8647866.15.7e-1268.42hypothetical protein Csa_000489, partial [Cucumis sativus][more]
BLAST of Bhi12G000215 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQY01.8e-1966.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1[more]
A0A5A7TN001.7e-1766.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KKB36.3e-1762.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1[more]
A0A5A7T8727.0e-1666.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000215Bhi12M000215mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane