Bhi12G000103 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000103
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 3610157 .. 3610308 (+)
RNA-Seq ExpressionBhi12G000103
SyntenyBhi12G000103
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCAACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTGGAACAAACTGCCTCCAAAACTGTTGGAGGAAAAGCATCCCTTCAGCCGAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTATTTTG

mRNA sequence

GTTCAACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTGGAACAAACTGCCTCCAAAACTGTTGGAGGAAAAGCATCCCTTCAGCCGAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTATTTTG

Coding sequence (CDS)

GTTCAACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTGGAACAAACTGCCTCCAAAACTGTTGGAGGAAAAGCATCCCTTCAGCCGAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTATTTTG

Protein sequence

STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL
Homology
BLAST of Bhi12G000103 vs. TAIR 10
Match: AT4G23885.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 3.6e-07
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0

Query: 13 DQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          D +FFS+L     KT GGKAS QPKRTP+SNEE+EAIL
Sbjct: 36 DTLFFSNL-NNIQKTTGGKASSQPKRTPVSNEEMEAIL 72

BLAST of Bhi12G000103 vs. TAIR 10
Match: AT5G24165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 2.9e-04
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0

Query: 7  SSSGVDDQIFFSSLEQTASKTV--GGKASLQPKRTPLSNEEIEAIL 51
          S SGV   +  SS    A K    GGKASLQPKRTP+S++EIE+I+
Sbjct: 25 SVSGVKKNVTASSDVPAAPKNTADGGKASLQPKRTPVSDKEIESIM 70

BLAST of Bhi12G000103 vs. NCBI nr
Match: XP_038875405.1 (uncharacterized protein LOC120067868 [Benincasa hispida])

HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL
Sbjct: 25 STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. NCBI nr
Match: XP_004143853.1 (uncharacterized protein LOC101205349 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-13
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSS G DD +FFSSLE+ ASKTVGGKASLQPKRTPLSNEEIEAIL
Sbjct: 25 STSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQPKRTPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. NCBI nr
Match: KAE8647833.1 (hypothetical protein Csa_000579 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-13
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSS G DD +FFSSLE+ ASKTVGGKASLQPKRTPLSNEEIEAIL
Sbjct: 42 STSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQPKRTPLSNEEIEAIL 91

BLAST of Bhi12G000103 vs. NCBI nr
Match: XP_008437426.1 (PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 9.2e-13
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSS+G DD IFFSSLE+ ASKTVGGKASLQPKR PLSNEEIEAIL
Sbjct: 25 STSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQPKRIPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. NCBI nr
Match: KAG7017033.1 (hypothetical protein SDJN02_22145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          S+S+TPSSSGVD Q F SSL +TASKTV GKASLQPKRTPLSNEEIEAIL
Sbjct: 25 SSSQTPSSSGVDSQNFISSLSETASKTVDGKASLQPKRTPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. ExPASy TrEMBL
Match: A0A0A0KMD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSS G DD +FFSSLE+ ASKTVGGKASLQPKRTPLSNEEIEAIL
Sbjct: 25 STSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQPKRTPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. ExPASy TrEMBL
Match: A0A1S3AUJ6 (uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.5e-13
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STSKTPSS+G DD IFFSSLE+ ASKTVGGKASLQPKR PLSNEEIEAIL
Sbjct: 25 STSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQPKRIPLSNEEIEAIL 74

BLAST of Bhi12G000103 vs. ExPASy TrEMBL
Match: A0A6J1K8D8 (uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STS+TP+S GVDDQ+ F SL + ASKT+GGKASLQPKRTP+SNEEIEAIL
Sbjct: 25 STSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQPKRTPMSNEEIEAIL 74

BLAST of Bhi12G000103 vs. ExPASy TrEMBL
Match: A0A6J1H0Q6 (uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC111459363 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STS+TP+S GVDDQ+ F SL + ASKT+GGKASLQPKRTP+SNEEIEAIL
Sbjct: 25 STSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQPKRTPMSNEEIEAIL 74

BLAST of Bhi12G000103 vs. ExPASy TrEMBL
Match: A0A6J1DS43 (uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023342 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-08
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0

Query: 1  STSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQPKRTPLSNEEIEAIL 51
          STS+TPS+ GVDDQ+ FS+      KTVGGKASLQPKRTP+SNEEIEA+L
Sbjct: 25 STSQTPSNLGVDDQVIFST--GNVLKTVGGKASLQPKRTPMSNEEIEAVL 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G23885.13.6e-0768.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G24165.12.9e-0454.35unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038875405.12.3e-16100.00uncharacterized protein LOC120067868 [Benincasa hispida][more]
XP_004143853.14.1e-1388.00uncharacterized protein LOC101205349 [Cucumis sativus][more]
KAE8647833.14.1e-1388.00hypothetical protein Csa_000579 [Cucumis sativus][more]
XP_008437426.19.2e-1388.00PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo][more]
KAG7017033.11.7e-1184.00hypothetical protein SDJN02_22145 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A0A0KMD82.0e-1388.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1[more]
A0A1S3AUJ64.5e-1388.00uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=... [more]
A0A6J1K8D81.1e-1178.00uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585... [more]
A0A6J1H0Q61.1e-1178.00uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC1114593... [more]
A0A6J1DS431.5e-0872.00uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..50
NoneNo IPR availablePANTHERPTHR35751:SF3OS06G0530200 PROTEINcoord: 3..50
NoneNo IPR availablePANTHERPTHR35751FAMILY NOT NAMEDcoord: 3..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000103Bhi12M000103mRNA