Bhi12G000028 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000028
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein spotted leaf 11
Locationchr12: 837742 .. 837966 (-)
RNA-Seq ExpressionBhi12G000028
SyntenyBhi12G000028
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCGGCAGTGGTTATGCAAATGGAGGGATGTGAAGAGAGCAAATTGGCATTTTATAGGGTTTTTGGATTGGGGGTTTAATTTGGTGGATTTGTTGAATTCAAGGACTAGTTCAAGTCAGAGGACGAAGGAGAACGCGGTATCAGCATTGTTGAATTTAGCAAAGTGGGATGGAGATAAGGCGGCAGAGGATGTTAAGGACTTGGGATTTGGACTTGAGTAA

mRNA sequence

ATGCGTCGGCAGTGGTTATGCAAATGGAGGGATGTGAAGAGAGCAAATTGGCATTTTATAGGGTTTTTGGATTGGGGGTTTAATTTGGTGGATTTGTTGAATTCAAGGACTAGTTCAAGTCAGAGGACGAAGGAGAACGCGGTATCAGCATTGTTGAATTTAGCAAAGTGGGATGGAGATAAGGCGGCAGAGGATGTTAAGGACTTGGGATTTGGACTTGAGTAA

Coding sequence (CDS)

ATGCGTCGGCAGTGGTTATGCAAATGGAGGGATGTGAAGAGAGCAAATTGGCATTTTATAGGGTTTTTGGATTGGGGGTTTAATTTGGTGGATTTGTTGAATTCAAGGACTAGTTCAAGTCAGAGGACGAAGGAGAACGCGGTATCAGCATTGTTGAATTTAGCAAAGTGGGATGGAGATAAGGCGGCAGAGGATGTTAAGGACTTGGGATTTGGACTTGAGTAA

Protein sequence

MRRQWLCKWRDVKRANWHFIGFLDWGFNLVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGLE
Homology
[Close]
BLAST of Bhi12G000028 vs. NCBI nr
Match: XP_038884040.1 (protein spotted leaf 11 [Benincasa hispida])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SSQRTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSQRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. NCBI nr
Match: XP_004146768.1 (protein spotted leaf 11 [Cucumis sativus] >KGN47768.1 hypothetical protein Csa_004083 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 8.3e-10
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SS RTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSLRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. NCBI nr
Match: XP_022132008.1 (protein spotted leaf 11, partial [Momordica charantia])

HSP 1 Score: 73.6 bits (179), Expect = 8.3e-10
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 29 LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
          LVDLL+S T SSQRTKENAVSALLNLA+W G++AAEDVKDLG G+
Sbjct: 34 LVDLLDSGTGSSQRTKENAVSALLNLARWGGERAAEDVKDLGSGI 78

[Close]
BLAST of Bhi12G000028 vs. NCBI nr
Match: XP_008445408.1 (PREDICTED: protein spotted leaf 11 [Cucumis melo] >KAA0064788.1 protein spotted leaf 11 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 8.3e-10
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SS RTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSLRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. NCBI nr
Match: XP_023002054.1 (protein spotted leaf 11 [Cucurbita maxima])

HSP 1 Score: 71.2 bits (173), Expect = 4.1e-09
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SSQRTKENAVSALLNLA+W G++A ED+KDLG G+
Sbjct: 301 LVDLLDSGTGSSQRTKENAVSALLNLARWGGERAEEDIKDLGSGI 345

[Close]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match: A0A5A7VB10 (Protein spotted leaf 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00950 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SS RTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSLRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match: A0A0A0KDY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401390 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SS RTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSLRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match: A0A6J1BV24 (protein spotted leaf 11 OS=Momordica charantia OX=3673 GN=LOC111004982 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 29 LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
          LVDLL+S T SSQRTKENAVSALLNLA+W G++AAEDVKDLG G+
Sbjct: 34 LVDLLDSGTGSSQRTKENAVSALLNLARWGGERAAEDVKDLGSGI 78

[Close]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match: A0A1S3BCM9 (protein spotted leaf 11 OS=Cucumis melo OX=3656 GN=LOC103488443 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SS RTKENAVSALLNLAKW GD+AAEDVKDLG G+
Sbjct: 224 LVDLLDSGTGSSLRTKENAVSALLNLAKWGGDRAAEDVKDLGSGI 268

[Close]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match: A0A6J1KPD1 (protein spotted leaf 11 OS=Cucurbita maxima OX=3661 GN=LOC111496043 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 29  LVDLLNSRTSSSQRTKENAVSALLNLAKWDGDKAAEDVKDLGFGL 74
           LVDLL+S T SSQRTKENAVSALLNLA+W G++A ED+KDLG G+
Sbjct: 301 LVDLLDSGTGSSQRTKENAVSALLNLARWGGERAEEDIKDLGSGI 345

The following BLAST results are available for this feature:
BLAST of Bhi12G000028 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000028 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000028 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884040.11.3e-1084.44protein spotted leaf 11 [Benincasa hispida][more]
XP_004146768.18.3e-1082.22protein spotted leaf 11 [Cucumis sativus] >KGN47768.1 hypothetical protein Csa_0... [more]
XP_022132008.18.3e-1080.00protein spotted leaf 11, partial [Momordica charantia][more]
XP_008445408.18.3e-1082.22PREDICTED: protein spotted leaf 11 [Cucumis melo] >KAA0064788.1 protein spotted ... [more]
XP_023002054.14.1e-0975.56protein spotted leaf 11 [Cucurbita maxima][more]
BLAST of Bhi12G000028 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VB104.0e-1082.22Protein spotted leaf 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KDY44.0e-1082.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401390 PE=4 SV=1[more]
A0A6J1BV244.0e-1080.00protein spotted leaf 11 OS=Momordica charantia OX=3673 GN=LOC111004982 PE=4 SV=1[more]
A0A1S3BCM94.0e-1082.22protein spotted leaf 11 OS=Cucumis melo OX=3656 GN=LOC103488443 PE=4 SV=1[more]
A0A6J1KPD12.0e-0975.56protein spotted leaf 11 OS=Cucurbita maxima OX=3661 GN=LOC111496043 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000028Bhi12M000028mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus