Bhi12G000019 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000019
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr12: 618308 .. 627346 (+)
RNA-Seq Expression	Bhi12G000019
Synteny	Bhi12G000019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAAATTGGTGTTTTGAGTACTGAAAGTAAGGTCTAGAAATTAGGTGTTGAAGAAGCAAGCAACTGGCCGAAGGTTGAAAAAGGTACACGAGGAGTGGGCTGTCGGTGAGCTGCCTCGCGCGCACCCATTGCACGCAACACGCCACTGTGCAGGCAACAACACCCAACTAGGCGACAAAGGCTGCAATTGCCTCGCCCATGCTCAATGCCCAAACCGCACTCGTTTAGCACCCCGCGCACGTTCATCGCCTAGCCAGCACACATTCATCGCCCAGTTTGCTCGCCCACAACGCCTAGCGCGCATGTGTGAGCCATTGGCCTTGTCACCCATGTGAAGCCCTGTGTGCATGCCCAAGCACCTGTGCATGTCCTAGCACCCACATTTGGCCTAGTGGTGTGCCTAGCTGCCGTGGGCTTGGTATTTGCCTAATTTTTAGAATTTGAAGTTGGTAAGCAATTGTTAAGTCTTTAGGAATGTTATGGATTTTAAGCTATAAAAATACTTAAATGTGGACTGTAAGAAGAATGTGAAGATTAATTAAAGTTAAGGAAAATGAATTAAAAAGGCTAATGAGTCAGTGTGTGCGAAGGTGTTCTGGTTAGTGGCTAGATTTAGGAGGCGTCGCTCTGATAGAAGGCCGGGGTGAGGTGGCTGGAGTTAGGTGATATGGACACGACATTTTTTCATCGTTGTGTTTTCTCTTGACGTAGTTGCAGTGGTTTATTTACGGTTGTGGATGCTAGGGGGACTCGTCAGTCAGTGCATAACAGGGTGGCGGGGGTGGCGATAGAGTTATTTCGGGGTAGTTTGGGGTCTCAGCCTGTGGGGTATAGGGATCTTACTACTCGGATCGGGGATATTGTGCAGTTCAGTTGGTCCGAGGAAGGGGTGGAGGTGCTTGGTCGTCTAGTGAGGCGGGATGAGATTTAGAAGGCTTTATTCTTGATGAAGTCTGAGAAGGCTCCTGGGCCTGATGGGTTTTCGGTGGATTTTTACAAAGCTACTTGGAGTATAGTTGGGGATGATTTTTATGATGTTGTTCTGAACTTTTTTGAGTCCTGTTACCTACCTGGTGAAGTTAATTCTACTGCTATTACTCTTATCCCAAAGAGGCGGGGAGCTGAATGTATGGAGGAGTTTCGTCCTATTTCTTGTTGCAATGTTGTGTATAAGTGTATCTCGAGGATTTTAGCTGAGAGATTGTGGTTGTGGTTGCCTTATTTCATCAGTGGTAACCAATCTGCGTTTGTTCCTGGTAGGTCGATTTTCGATAACATTTTATTGTGTCAGGAGCTTGTGGAAGGCTATAAGGAGGGCAGAGGGAAGCTGCGTTGTGTGTTGAAGGTGGACCTTCAGAAGGTGTACGATTTGATCAATTGAGATTTTCGTTTGGTGTGTTACTGGCTATAGGTACGCCTCTTCAGTTTGTTAGATGGGTGAGGGCTTGTGTTACTTCGCTTACGTTCTCTGTGATGATTAATGGTTCCCTTGAGGGGTTTTTTCCTGGTAGGAAGGGGTTGAAGCAAGAGGATCTATTGTCTCATTTTTTATTTGTGATGATGATGGAGGTCTTGTCCCGATTGTTGAATAAATCTCCTGTGTGGTTTAGGTTCCATGATCGGTGTAAGCGTGTGGGCCTATCTCATTTGATTTTTGCAGACAATTTGATGATTTTATGTGCAGCTGAGAGAGATTCTTTGGAGTTTGTGAGGCAAGTCCTGGTGGATTTTGCAGGATTGTCTGGGTTAGTTGCAAATATTGGAAAGAGTTCCATATTTGTTGCGGATGTGAAGTCAAGTGAGGCGGAGGAACTAGCTACGTTTATGGGATTCTCTCTTGGTTCGCTACCTTTTAGGTATCTGGGGTTACCTTTATTGGCTGGTCGGTTGAGGGCTGTGGATTGTGCGCCTTTGATTCAGAGGATTACAGCTGGTATTAGAAGCTGGGCACCGAGGTCCAACTCTTTTACTAGGAGGTTGCAGCTTGTTAGGTCTGTTTTACAGTCCTTTCAGGTATTTTGGTGTAGCATCTTCGTGTTGCCTACGTGTGTAACTCATGAGGTTGATCGTCTGTTATGTAGTTATTTTTGGAAGGGTAGTGTGATGAGTCGGGGTGGTACGCGGGTGGTATGAGATGAGGTGTGCTCGCTGTTGGGAAGGGGAGGGGGGATTGGGTGTGAAACATGTGGCTTCTTGGAACCAGGTTGATATTATAAAGCTGCTCTGGCTTCTCTTAATTAAATTGGGATCATTATGGGTAGCATGGGTGGAGATGTATGTTTTGCGTGGGCAGTCTTTGTAGGCTGTTCAGAGTGAGGTTGGCAGGTTTTGGTGCTTGAGGGCTATCTTGCGTTGTAGAGATAGTTTCAAACATCTGGTTCGTTTGATGATCGGCGATGGACAGTCTTGTTTTGTTTGGTGGGATCCTTGGCTGCCGGGGGATACGATTTTGGATTCATATGAGTCTACAGTGGTTTATGATGCAGGGAGTAGATTGGAGGTGCGATTATCAGAGTTCATCACATCGGGTGGCGGGTTGGGATGTTGAGTTAAGTTGGTTGTGTTGAGTGGGGTCGGATAAAAGGGTGCGTAAGTTGTTCCGTGTATTTTGGTGTGCTTCCATCTATTACATCTGACAAAAGTGTAACCGGCGGCTGCATGGAGGTCGACCGAGGTCGGTGTCTACTTTGTTTCACCTTATGGTCTCTACGGTTCATGCTCGAGCTGCTTCCTCACGGGTTGATCTTCTTGGTCTTATCTAGTGTGTTTACGGATGTTTTTCTTCTTTTTGAACTTGTTGTTGCCTTTTGTTTTGCTGTTATCTAGCTGTGGGGTTTTGGTTTCTTTTCTCTGGCTTTCTCCCTAGTGGTTTGGGGGTTTATGTGTTTATGTTTTGGTTATGTTCTGGTCTTATTTTGTTGCCTTTGTTTGTGGAATTGTTGCCTTGTCTTTCCTTGTGCTTTGTTGCTTTGATGCCTTGATTCCGGGCTATGGGATCCCCCTTGTTATTGTATAATAATATCACATATTCTAAAAAAAAAAAAATATTAAAAAGGCTAGGTTTAGTTGAAGCTAATAAGTACAAGGGTGAGCTAGAAAACTAACCAAAGGTTACTAATTTATTTTTTAGGCCAAACAGAGGTTGCCTATAAAACCCTTGGGGAGCTAACCAGTATCAGTGAGTGACAAATGATTTAAGATGTTTTCCTTAAATTCTTTCAATGCATGATTTCTTTTGAGACAAGTTAACCCTTGTCAAATGTGGTTTGAGAGCCATATGCTTTAATGTTTTTAAAGTATGTTAAAGCATGAATTTCTCTTGTATGAGCTATGTGCTTCAAAGTTTTCACATAGTTTCTGATACCATGGTAAGGCAAGAGTTTCTTTTGAATTAACTTTAAATGCTAGTTTTCCCATGACAAGGTTAAGCATGATTTTAATAATGACAAGCATTCCAAATATGTTTCTTAAAGCATTATGCGTATGATTATCTATTTAAAATGCTAAGCTATTTATGGAATGCCAAATGAACTCATATTCAAGCATGATTTGTAAAGGAATGTTTCATGTACCCTAATTTTCGATACTCATGGAGGTGAAGGTATCCGGGACCCTGATACTCAAGGAGATGAAGGTATCCAGGAAACTTATTATTTATATAACATACAAAGGTCTTTGGGTCCCGCTTTAGCACACCTATAGGATTTGGGCCGTGTGCTAGGGTGATTAGCCTTTTGGGAGTATTTCTACGTGCACTTATGAGAGTTGTTTACACTAAGAATATTGAGCTTGCTTTACCTGAACTAAGATGAAAGAAGTACAAAGTTATGTGTTGTTGTTTTTTTTCATGAGAATTACATAAGCTTTACTATGTTTTAAGGGGTTTCTAATGTTTTAATGTGATGTTTCTATTGCAAAGCTATTAAATTTCCAAACATGTTTAAAACCCTAAAGCTCTGAAGGATTACATGATTTACAATAATTTCTCTTAAGTTTAAAGTATGTTTATGTATTAAATTTAAATGTCATTCACTGGGCTTTCCAGCTCACAGTTTTAAAATGTTTTCACTCCCTAGGTTGTGATCGAGTTTTCGTTGCTTAGCTTACAGCTGTCAATTTGCCACACCACTTCTAAAAGGTCCTTGTCAACCCAAGAAGTTTGCGAGGTCTAAGTCAAGTTTTTTATTGTCTTGTAATCTTGTACATACTAGTTAGAAAAGGGTAGTACCCAAGTCTGTAATTATGTTTGTAGACCCTGATATGTAATCATCAAACTGTAGATATGTATGTAAAGCATGTTATATGATAAACCAAGTTATGCAAGTGGTTTGAGTTCTCTTTGCCACTAAGGCTTAACTTTGAGATGTCTATATATATAATTACTTATCAAGTTATGCGAAGGCGAGGAATAGGTTATAGGTACTAGATAAACAGTTGGTGTCATAAGAGGGTTAACATCTATTGTCCTCACATCTCTTTCCAGGTTAAGAGGGTAGCCTGGGAGGGGGTGTGACACATTATCACCTCAAAAGCTTTAGATTTTATCCTAAGCACATGTCAGGAAAAGTTAACGGGGAAAAAAAACAATCTGGAGAGTGCTATTCTGAATGGGACAATGGTATGACTTGAAAACATACAAAAATAGATTGATACGCGATATCTCCTTTGCTTTCCCCGTGCTAAAGGTATTTTATTTGGGAATTGTCCATTCGAAAGCTTCACATTTTATTCCAACAACTTGTTTGAAAAAGTTGATGAAAAAAGCTACCTAGAGCATGTTAGTTAGAAAAGGACAATGACACAACTTGAAAACATGCAAAAAATGGGTCAATATGCAGTATTTCCTTTCCTTTTTAGGTGCTGTAGGTATTTTATTTGGGCATTATCAGTTCAAAAGCTTCAAATTTTACCCCAAGCACATGTTAGGAAAATTTACATTAAAAAAACATATGGAGGGTGCTATTAAGAGGACAATGACACCACTTGAAAACGTACGAAATGAGTCGATAGCGGTATCTTTTACACATTTTCTCATTTACCTATAGGTGCTATAGGTATTTTATTTAGACATTATCGGCTCAAAAGCTTCACATTTTAACATATCGAGAAAAGTTAAACGCAAAAACAAAAAACCTAGATGGTGCTTTTCAGAATGGGATAATGAGACCACCTAAAAATGTACGAAAATGGGTCAATATGCAATATCACCTTCTGTTTTGGGGTTCTACAGGTGTTTTATCTGGGCATTATCGATTTGGAAGCATTACATTTTGAACATGTGGGAAAAAGTTGATTAAAAAAAAAAAAAACTAGAGGTTGCTATTCTAAACGGGACAATGACACTAGTTAAAAAAGTACGAAAATGGGTCGATATGCGGTATATTCTTTCCTTTTTGGGGGTTACAGGTATTTTATTTGGGTAGTATCATTTAAAAGCTCACATTTGTATTCCAAGAAGATGTTGGAAAAGTGACGAAAATATAAAAAAAAAAAAAAAAAAAACCTGGAGTGCTATTCATACAGGACATATGCCCACTTGAAAAATCATATGAATAGCGGTCCGACACCGGTATCTCCTTTCTTTTCGTTGTGCAAGGTATTGATTTGACGTACCATTCAAAAGCTTACATTTTATTCATAGAACATGTTACGAAATAGACCAAGAAAAATACTGGAGGTGGCTATTCAAATAGCGACAATATACATCAATTGTAATGTACGGAAAAGGGTCGATATGCAGTAATCTCTTTTCCTTTTTGGATTATGCAGGCCTATTTTATTTGAATGTTACTATAAATTCAAAAACTTATCATTTTATCCAAAGATTATGTCTGAAAAGTGAGCAAAAAAAAAAAAAAAAGACCTGTAGTGCTCTTCAGAATTGCCAAGGCCAACAACATGAACATACAAAATATCAATGCAGGTATCTCTTTTTTCGGGTGCTACAGATATTGATTTGGATATATACCATCAACGCTATCACATATTTATCCTAAGAAAATTTCCGAACATTGACTGCAAAAAAAAAAAAAAAAAAAATACTTGGAGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCATCTCTTTCTTTTCGGAATTGCTGCAGGTATTTTATATTGGACAGTTAAGTTCAAAAGCTTTATTTTTATTCAAGAACTGTTCAGAAAGTTAGACCAAAAATCTGGAGGTGGCATTCGAATAGGGACAAATAACATCAATTGTAATGTACAGAAAATGGGTCATATGCAGTTCTCTTTTTCCTTTTGGATAGTTCACATATTTTATTTGAGGTACTATTAATTCAAAAACTTTCACATTTTATCCCAAAGATTATGTCTGAAAAGTTGACGCAAAACAAAACCCAAAAAAGAAAAGACCTGTAGCGGTGCTTTAGAATATGCCAAGGAGACAACCATTGAGAAACGTCAAAATAGGTCAATGCATGTATCTCCTTTTTTCGGTGTTCCAGATATTTTCTTGGTATTATCCTTCCACAATGCTTTCACTTTATTTTAACCTAAGAAAATTTGGAAGAATTGACGCAAAAAAAAAAAAAAAAAAAAAAAAATTTGGAGGTGTATTCGAGAATAATAACCATAATAACATCACAATGAAGTCGCAGGATTAATAGGTTGATATTATGTTTTCCTTTTCCTTCTTTATGGCAAACGAGTAGATTACGAGCTCACTCTTGTTGTTTATTGAGGTGCGTATTATTAGTTTTGGAAAGCTTTTACTACCCTATACTAAGTAACTGCGAGAAACATTGATATAAAAAATGAATTGAAGTGCTATGTTTGAATGGAGGACATGACATATGTTCGAGAATCAACGGAAATGGGTCAAATTTACGCAATATATCCTTTCTTTTCGAATTGCTGATCTATTATTATTTGAGAATATCAGTTCCAAGCTTTCATTCTTTTTCAGATGGGGAACAAATTGACACAATTGAAAAGTACAATGGGTCGAGTCGATATAGTATCTCTTTCCTATTGGGCTTATTGGGCATTTTATCGATTCGAGCCATCCATTGTTATTTCAAAAAAATTGAGGCCAAAAAAAAAAAAAAAATGGATGGCGTTGCCTATTCTAAAGTGACATGAATTAGTTTTAAAACGTTTACGAAAATAGGATCGACATAGATTTATTTCTATACTTTTTTGTCTGGTCATTTGCTACAGGTTTTTTATTTTATTTGGGCATTATCAATTTGTAAGCTCCACATTTTATCCTAAAAATATGTTAGGAGAAGTTGATGCAAAAAAAAAAAAGAAAAAAAAAAGAAAAAGAAAAAAAAAAGAAAAAAGAAACTGGAGGGTGCTATTCAAAATGGGAAAATGGCACCATTTGAAAATGTATGATAATGAGTAAATATGGGGTATCTCCTTTCTTATTCGGGTGCTGTAGGTATTTTATTTGGGCACTATCACTTTGAAAGCTTCAAATTTTATCTCAAGAACATGTCAGGAAAAGTTAATACAAATATATATATATATGGAGGGTGCTATTGGGAATGGGACAATGGCGCCATTTGAAAATGTATGAAAATAGGTCGATACGCGGTATCTGCTTTTCCTTTCCTTGTGTTACAGGTGTTTTATTTGGACATTATCCATTCAAGAGCTTCACATTTTATCCCAAGAACATGTAGGAAAAAGTTGATGAACAAAAAAAAAATACCTAGAGCCCTATCCAAAATGAGACAATGGTACCACTTGAAAACGTACGAAAATGGGTCAATATGCGGTATCTCATTTTTTTTTGTGGTGCTACAATTATTTTATTTGGGCATTATCAGTTTAAAAGCTTCACATTTTATCCTAAGGACATACTGGGAAAAGTTGACATAAAAATACATGGAGGGTGCTATTATGAATAGGAGAACGACACTAGTTGAAGACGTACAAAAATGGGTTGATACGTGGTATATCCTTTCTTTATCGGATGCTACAGATATTTTATTTGGGCATTATCAGTTCCAAAACTTCACATTTTATCCCAAGAACCTGTCGGGGGAAGTTGACACAAAAAAAACATAGAGGGTGCTATTTAGAATGGGACAATGGCATCACTTGAAAATGTACGAAAATGGATCGATACGCGGTATTTTCTTTCCTTTCCAAGTGTTGCAGATATTTTATTTGGGTATTATCGATTCAAAAGCATCAAATTTTATTCCAAGAACATGTGGGGAAAGTTCACGCAAAAAAAAAAAAAAGCTGGAGGGAGCTATTTTGAATGGGACAATGACACTAGGTAAAAACAAACTAAAATGGGTGGATATGCGATATATCCTTTCCTTTTTAGGTGCTACAAGTATTTTATTTTGGCATTTTATCCCAAGATCATGTTGGGTAAAGTTGATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAACCTGGAAGGTGCTATTCATAATGGGACAATGGCACCACTTGGGAATGTAGATGATGGGTCGATACAGGTTATCTCCTTTCCTTTTCCGGTGTTGCAGGTACTTTATTTAGGCATTATCACTTCAAAAGCTTTAGATTTTATCCTAACAACTTGTTAGAAAAATTTTAACGGAAAAAACTTGAAGGGTGCTATTTTGAATGGGACAATGGCACCACTTGAAAACGTACGAAAATAGGTCGATACACGATATCTTTTCCTTTTCCTGTGCTTCAGGTATTTTATTTGGGCATTATCCATTCAAAAGCTTCACATTTTATCCCAAGAACATGTGAGAAAAGTTGATGAAAAAAATACCTAGAGTGTGCTATTCAGAATGGGACAATTGCACCACTTGAAAACATATGAAATGGGTCGATACGCGGTATCTCCTTTCCTTTTCGGGTGCTACAGGTACTTTATTTTTTCATTATCGGTTTGAAAGCTTCAGATGCAAAAACTTGATGCAAAAAAAAAAAAAAATGGAGGGTGCTATTCAGAATAGGACAATGGCATCACTTGAAAAAGTATGAAAATGGGTTGATACACGATATCTCCTTTCCTTTTTAGGTGCTCTAG

mRNA sequence

ATGGTTGAAATTGGTGTTTTGAGTGTTGAAGAAGCAAGCAACTGGCCGAAGGTTGAAAAAGGTACACGAGGAGCGACAAAGGCTGCAATTGCCTCGCCCATGCTCAATGCCCAAACCGCACTCCCCTGTGTGCATGCCCAAGCACCTGTGCATGTCCTAGCACCCACATTTGGCCTAGTGGTGTGCCTAGCTGCCGCTAATGAGTCAGTGTGTGCGAAGGTGTTCTGGTTAGTGGCTAGATTTAGGAGGCGTCGCTCTGATAGAAGGCCGGGGGGGACTCGTCAGTCAGTGCATAACAGGTTATTTCGGGGTAGTTTGGGGTCTCAGCCTGTGGGGTATAGGGATCTTACTACTCGGATCGGGGATATTGTGCAGTTCAGTTGGTCCGAGGAAGGGAAGGCTTTATTCTTGATGAAGTCTGAGAAGGCTCCTGGGCCTGATGGGTTTTCGGTGGATTTTTACAAAGCTACTTGGAGTATAGTTGGGGATGATTTTTATGATGTTGTTCTGAACTTTTTTGAGTCCTGTTACCTACCTGGTGAAGTTAATTCTACTGCTATTACTCTTATCCCAAAGAGGCGGGGAGCTGAATGTATGGAGGAGTTTCGTCCTATTTCTTGTTGCAATGTTGTGTATAAGTGTATCTCGAGGATTTTAGCTGAGAGATTGTGGTTGTGGTTGCCTTATTTCATCAGTGGTAACCAATCTGCGTTTGTTCCTGGTAGGTCGATTTTCGATAACATTTTATTGTGTCAGGAGCTTAGGGAAGCTGCGTTGTGTGTTGAAGGTGGACCTTCAGAAGGTGTACGATTTGATCAATTGAGATTTTCGTTTGGTGTGTTACTGGCTATAGGTACGCCTCTTCAGTTTGTTAGATGGGTGAGGGCTTGTGTTACTTCGCTTACGTTCTCTGTGATGATTAATGGTTCCCTTGAGGGGTTTTTTCCTGGTAGGAAGGGGTTGAAGCAAGAGGATCTATTGTCTCATTTTTTATTTGTGATGATGATGGAGGTCTTGTTCCATGATCGGTTCCTTTCAGGTTATATGTTAAGAGGGTGCTGTGCTATAGGTGCTACAAGTGCTCTAG

Coding sequence (CDS)

ATGGTTGAAATTGGTGTTTTGAGTGTTGAAGAAGCAAGCAACTGGCCGAAGGTTGAAAAAGGTACACGAGGAGCGACAAAGGCTGCAATTGCCTCGCCCATGCTCAATGCCCAAACCGCACTCCCCTGTGTGCATGCCCAAGCACCTGTGCATGTCCTAGCACCCACATTTGGCCTAGTGGTGTGCCTAGCTGCCGCTAATGAGTCAGTGTGTGCGAAGGTGTTCTGGTTAGTGGCTAGATTTAGGAGGCGTCGCTCTGATAGAAGGCCGGGGGGGACTCGTCAGTCAGTGCATAACAGGTTATTTCGGGGTAGTTTGGGGTCTCAGCCTGTGGGGTATAGGGATCTTACTACTCGGATCGGGGATATTGTGCAGTTCAGTTGGTCCGAGGAAGGGAAGGCTTTATTCTTGATGAAGTCTGAGAAGGCTCCTGGGCCTGATGGGTTTTCGGTGGATTTTTACAAAGCTACTTGGAGTATAGTTGGGGATGATTTTTATGATGTTGTTCTGAACTTTTTTGAGTCCTGTTACCTACCTGGTGAAGTTAATTCTACTGCTATTACTCTTATCCCAAAGAGGCGGGGAGCTGAATGTATGGAGGAGTTTCGTCCTATTTCTTGTTGCAATGTTGTGTATAAGTGTATCTCGAGGATTTTAGCTGAGAGATTGTGGTTGTGGTTGCCTTATTTCATCAGTGGTAACCAATCTGCGTTTGTTCCTGGTAGGTCGATTTTCGATAACATTTTATTGTGTCAGGAGCTTAGGGAAGCTGCGTTGTGTGTTGAAGGTGGACCTTCAGAAGGTGTACGATTTGATCAATTGAGATTTTCGTTTGGTGTGTTACTGGCTATAGGTACGCCTCTTCAGTTTGTTAGATGGGTGAGGGCTTGTGTTACTTCGCTTACGTTCTCTGTGATGATTAATGGTTCCCTTGAGGGGTTTTTTCCTGGTAGGAAGGGGTTGAAGCAAGAGGATCTATTGTCTCATTTTTTATTTGTGATGATGATGGAGGTCTTGTTCCATGATCGGTTCCTTTCAGGTTATATGTTAAGAGGGTGCTGTGCTATAGGTGCTACAAGTGCTCTAG

Protein sequence

MVEIGVLSVEEASNWPKVEKGTRGATKAAIASPMLNAQTALPCVHAQAPVHVLAPTFGLVVCLAAANESVCAKVFWLVARFRRRRSDRRPGGTRQSVHNRLFRGSLGSQPVGYRDLTTRIGDIVQFSWSEEGKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSEGVRFDQLRFSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVLFHDRFLSGYMLRGCCAIGATSAL

Homology

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BLAST of Bhi12G000019 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-16
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 134 ALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLIPKR 193
           A+F M   KAPGPD F+ +F+  +W +V D     V  FF + +L    N+TAITLIPK 
Sbjct: 539 AVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKV 598

Query: 194 RGAECMEEFRPISCCNVVYKCIS 217
            G + +  FRP+SCC VVYK I+
Sbjct: 599 TGVDQLSMFRPVSCCTVVYKIIT 621

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BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-20
Identity = 65/215 (30.23%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 130 EEGKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITL 189
           E  +AL LM   K+PG DG +++F++  W  +G DF+ V+   F+   LP       ++L
Sbjct: 453 ELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSL 512

Query: 190 IPKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNIL 249
           +PK+     ++ +RP+S  +  YK +++ ++ RL   L   I  +QS  VPGR+IFDN+ 
Sbjct: 513 LPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVF 572

Query: 250 LCQEL----REAALCVEG-GPSEGVRFDQL--RFSFGVLLAIGTPLQFVRWVRACVTSLT 309
           L ++L    R   L +      +   FD++  ++  G L A     QFV +++    S  
Sbjct: 573 LIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAE 632

Query: 310 FSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMME 338
             V IN SL       +G++Q   LS  L+ + +E
Sbjct: 633 CLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIE 667

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BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15
Identity = 66/227 (29.07%), Postives = 108/227 (47.58%), Query Frame = 0


Query: 127 SWSEEGKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESC----YLPGEV 186
           S SE    +  +  +K+PGPDGF+ +FY+       ++   ++LN F++      LP   
Sbjct: 453 SSSEIASTIQNLPKKKSPGPDGFTSEFYQT----FKEELVPILLNLFQNIEKEGILPNTF 512

Query: 187 NSTAITLIPK-RRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPG 246
               ITLIPK  +     E +RPIS  N+  K +++IL  R+   +   I  +Q  F+PG
Sbjct: 513 YEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPG 572

Query: 247 -------RSIFDNILLCQELREAALCVEGGPSEGVRFDQLRFSFGV--LLAIGTPLQFVR 306
                  R   + I    +L+     +    +E   FD ++  F +  L  IG    F++
Sbjct: 573 SQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKA-FDNIQHPFMIRTLKKIGIEGTFLK 632

Query: 307 WVRACVTSLTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
            + A  +  T ++++NG     FP R G +Q   LS  LF ++MEVL
Sbjct: 633 LIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVL 674

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BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-15
Identity = 59/219 (26.94%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 138 MKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESC----YLPGEVNSTAITLIPK- 197
           + ++K+PGPDGF+ +FY+       ++    +L  F+S      LP      +I LIPK 
Sbjct: 465 LPTKKSPGPDGFTAEFYQR----YKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKP 524

Query: 198 RRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGR---------- 257
            R     E FRPIS  N+  K +++ILA R+   +   I  +Q  F+PG           
Sbjct: 525 GRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSI 584

Query: 258 SIFDNILLCQELREAALCVEGGPSEGVRFDQLR--FSFGVLLAIGTPLQFVRWVRACVTS 317
           ++  +I   ++     + ++   +    FD+++  F    L  +G    +++ +RA    
Sbjct: 585 NVIQHINRAKDKNHVIISIDAEKA----FDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDK 644

Query: 318 LTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
            T ++++NG     FP + G +Q   LS  LF +++EVL
Sbjct: 645 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVL 675

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BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 3.3e-14
Identity = 60/216 (27.78%), Postives = 103/216 (47.69%), Query Frame = 0


Query: 138 MKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESC----YLPGEVNSTAITLIPK- 197
           + ++K+PGPDGFS +FY+       +D   ++   F        LP       ITLIPK 
Sbjct: 472 LPTKKSPGPDGFSAEFYQT----FKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKP 531

Query: 198 RRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPG-------RSIF 257
           ++    +E FRPIS  N+  K +++ILA R+   +   I  +Q  F+PG       R   
Sbjct: 532 QKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSI 591

Query: 258 DNILLCQELREAALCVEGGPSEGVRFDQLR--FSFGVLLAIGTPLQFVRWVRACVTSLTF 317
           + I    +L++    +    +E   FD+++  F   VL   G    ++  ++A  +    
Sbjct: 592 NVIHYINKLKDKNHMIISLDAEKA-FDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVA 651

Query: 318 SVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           ++ +NG      P + G +Q   LS +LF +++EVL
Sbjct: 652 NIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVL 682

[Close]

BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot
Match: P16423 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 73/284 (25.70%), Postives = 118/284 (41.55%), Query Frame = 0


Query: 83  RRRSDRRPGGTRQSVHNRLFRGSLGSQPV---GYRDLTTR------IGDIVQFS------ 142
           +R  D+  G   +S+ N      + SQ +    +R++ T+       G+++Q        
Sbjct: 281 QRNWDKHKGRCIKSLLNGTDESVMPSQEIMVPYWREVMTQPSPSSCSGEVIQMDHSLERV 340

Query: 143 WS---EEGKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESC-YLPGEVN 202
           WS   E+      +    +PGPDG +    +     V       ++N    C  LP  + 
Sbjct: 341 WSAITEQDLRASRVSLSSSPGPDGITPKSARE----VPSGIMLRIMNLILWCGNLPHSIR 400

Query: 203 STAITLIPKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRS 262
                 IPK   A+  ++FRPIS  +V+ + ++ ILA RL   + +     Q  F+P   
Sbjct: 401 LARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSINW--DPRQRGFLPTDG 460

Query: 263 IFDN-----ILLCQELREAALCVEGGPSEGVRFDQLRFS--FGVLLAIGTPLQFVRWVRA 322
             DN     ++L    +    C          FD L  +  +  L A G P  FV +V+ 
Sbjct: 461 CADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQN 520

Query: 323 CVTSLTFSVMING-SLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
                  S+  +G S E F P R G+KQ D LS  LF ++M+ L
Sbjct: 521 TYEGGGTSLNGDGWSSEEFVPAR-GVKQGDPLSPILFNLVMDRL 557

[Close]

BLAST of Bhi12G000019 vs. NCBI nr
Match: KAA0065355.1 (F17F8.5 [Cucumis melo var. makuwa] >TYK20852.1 F17F8.5 [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 2.5e-83
Identity = 167/277 (60.29%), Postives = 194/277 (70.04%), Query Frame = 0


Query: 92  GTRQSVHN-------RLFRGSLGSQPVGYRDLTTRIGDIVQFSWSEE------------- 151
           G+R S H+         FR SLGSQ +GYR+L+  I DIVQF WSEE             
Sbjct: 301 GSRISSHDGVVHLVVNYFRNSLGSQKIGYRELSPVIEDIVQFRWSEECCQALQIPTIREE 360

Query: 152 -GKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLI 211
             + LF M S KAP PDGFSV F K  WS+VG+DF D VL+FFE+CYLP  VN+TAITLI
Sbjct: 361 VRRVLFSMDSGKAPVPDGFSVGFIKGAWSVVGEDFCDAVLHFFETCYLPIGVNATAITLI 420

Query: 212 PKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILL 271
           PKRRGAE MEEFRPISCCNV+YKCIS+IL +RL +WLP FIS NQSAF+PGRSI DNILL
Sbjct: 421 PKRRGAERMEEFRPISCCNVIYKCISKILTDRLHVWLPSFISSNQSAFIPGRSIIDNILL 480

Query: 272 CQELREAALCVEGGPSEGVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLT 331
           CQEL        G P   ++ D  +        F FG+L+AIGTPL+FV W+RACVTS  
Sbjct: 481 CQELVGGYHLNSGKPRYTLKIDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSSM 540

Query: 332 FSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           FS+MINGS EGFF GRKG++Q D LS FLFVM+MEVL
Sbjct: 541 FSIMINGSFEGFFHGRKGVRQGDPLSPFLFVMVMEVL 577

[Close]

BLAST of Bhi12G000019 vs. NCBI nr
Match: KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-82
Identity = 166/277 (59.93%), Postives = 195/277 (70.40%), Query Frame = 0


Query: 92  GTRQSVHN-------RLFRGSLGSQPVGYRDLTTRIGDIVQFSWSEE------------- 151
           G+R S H+         F  SLGSQ +GYR+L+  I DIVQF WSEE             
Sbjct: 349 GSRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPIIDDIVQFQWSEECCQALQLPISREE 408

Query: 152 -GKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLI 211
             + LF M S KAPGPDGFSV FYK  WS+VG+DF + VL+FFE+CYLP  VN+TAITLI
Sbjct: 409 VRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDFCNAVLHFFETCYLPIGVNATAITLI 468

Query: 212 PKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILL 271
           PK  GAE +E+FRPISCCNV+YKCIS+ILA+RL LWLP FIS NQSAF+PGRSI +NILL
Sbjct: 469 PKHIGAERLEDFRPISCCNVLYKCISKILADRLRLWLPSFISSNQSAFIPGRSIIENILL 528

Query: 272 CQELREAALCVEGGPSEGVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLT 331
           CQEL        G P   ++ D  +        F FG+L+AIGTPL+FV W+RACVTS  
Sbjct: 529 CQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSSM 588

Query: 332 FSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           FS+MINGSLEGFF GRKGL+Q D LS FLFVM+MEVL
Sbjct: 589 FSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVMEVL 625

[Close]

BLAST of Bhi12G000019 vs. NCBI nr
Match: KAA0057642.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 303.5 bits (776), Expect = 2.4e-78
Identity = 163/306 (53.27%), Postives = 198/306 (64.71%), Query Frame = 0


Query: 69  SVCAKVFWLVARFRRRRSDRRPGGTRQSVHNRL-------------FRGSLGSQPVGYRD 128
           S+  + FW   R  + R  R       SV +R+             F  SLGSQ +GYR+
Sbjct: 279 SLATETFWTAVRLEKPRFGRNLEFVVDSVCSRVSSHDGVAQMAVNYFSNSLGSQEIGYRE 338

Query: 129 LTTRIGDIVQFSWSEE--------------GKALFLMKSEKAPGPDGFSVDFYKATWSIV 188
           LT  I DIVQF WSEE               + LF M S KAPGPDGFSV F+K  WS++
Sbjct: 339 LTPIIDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVI 398

Query: 189 GDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISCCNVVYKCISRILAE 248
           G+DF D VL+FFE+ YLP  VN+TAITLIPK  GAE +E+FRPISCCNV+YKCIS+ILA+
Sbjct: 399 GEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILAD 458

Query: 249 RLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSEGVRFDQLR------ 308
           RL +WLP FIS NQSAF+ GRSI +NILLCQEL        G P   ++ D  +      
Sbjct: 459 RLRVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVN 518

Query: 309 --FSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFV 340
             F FG+ ++I TPL+FV W+ ACVTS  FS+MINGSLEGFF GRKG++Q D LS FLFV
Sbjct: 519 WDFLFGLQISISTPLKFVSWISACVTSPMFSIMINGSLEGFFHGRKGVRQGDPLSLFLFV 578

[Close]

BLAST of Bhi12G000019 vs. NCBI nr
Match: TYK19523.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-77
Identity = 154/260 (59.23%), Postives = 184/260 (70.77%), Query Frame = 0


Query: 102 FRGSLGSQPVGYRDLTTRIGDIVQFSWSEE--------------GKALFLMKSEKAPGPD 161
           F  SLGSQ +GYR+LT  I DIVQF WSEE               + LF M S KAPGPD
Sbjct: 306 FSNSLGSQEIGYRELTPIIDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPD 365

Query: 162 GFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISC 221
           GFSV F+K  WS++G+DF D VL+FFE+ YLP  VN+TAITLIPK  GAE +E+FRPISC
Sbjct: 366 GFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISC 425

Query: 222 CNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSE 281
           CNV+YKCIS+ILA+RL +WLP FIS NQSAF+ GRSI +NILLCQEL        G P  
Sbjct: 426 CNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRC 485

Query: 282 GVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRK 340
            ++ D  +        F FG+ ++I TPL+FV W+ ACVTS  FS+MINGSLEGFF GRK
Sbjct: 486 TLKVDLQKAYDSVNWDFLFGLQISISTPLKFVSWISACVTSPMFSIMINGSLEGFFHGRK 545

[Close]

BLAST of Bhi12G000019 vs. NCBI nr
Match: XP_031745730.1 (uncharacterized protein LOC116406187 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 3.8e-76
Identity = 151/256 (58.98%), Postives = 185/256 (72.27%), Query Frame = 0


Query: 106 LGSQPVGYRDLTTRIGDIVQFSWSEE---------GK-----ALFLMKSEKAPGPDGFSV 165
           +GSQ + YR+L+T I +IVQF W+E+         G+      LF M   KAPGPDG+SV
Sbjct: 1   MGSQNISYRELSTSIEEIVQFRWTEKCCQALQSPIGREEVRLVLFSMDGGKAPGPDGYSV 60

Query: 166 DFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISCCNVV 225
            F+K  W++V + F DVVL+FFE+ Y P  VN+TAITLIPKR GA+ +E+F PISCC+V+
Sbjct: 61  GFFKGAWTVVEEGFCDVVLHFFETNYFPQGVNTTAITLIPKRNGADRLEDFSPISCCSVI 120

Query: 226 YKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSEGVRF 285
           YKCISRILA+RL +WLP F+SGNQ AF+PGRSI DNILLCQEL  A     G P   ++ 
Sbjct: 121 YKCISRILADRLRVWLPSFVSGNQPAFIPGRSIIDNILLCQELVGAYHLYRGKPRCTMKV 180

Query: 286 DQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRKGLKQ 340
           D  +        F FG+L+AIGTPL+FV WVRACVTS  FS+MINGSLEGFF GRKGL+Q
Sbjct: 181 DLHKAYDSVNWDFLFGLLIAIGTPLRFVSWVRACVTSPMFSIMINGSLEGFFHGRKGLRQ 240

[Close]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL
Match: A0A5A7VHU9 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00030 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 167/277 (60.29%), Postives = 194/277 (70.04%), Query Frame = 0


Query: 92  GTRQSVHN-------RLFRGSLGSQPVGYRDLTTRIGDIVQFSWSEE------------- 151
           G+R S H+         FR SLGSQ +GYR+L+  I DIVQF WSEE             
Sbjct: 301 GSRISSHDGVVHLVVNYFRNSLGSQKIGYRELSPVIEDIVQFRWSEECCQALQIPTIREE 360

Query: 152 -GKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLI 211
             + LF M S KAP PDGFSV F K  WS+VG+DF D VL+FFE+CYLP  VN+TAITLI
Sbjct: 361 VRRVLFSMDSGKAPVPDGFSVGFIKGAWSVVGEDFCDAVLHFFETCYLPIGVNATAITLI 420

Query: 212 PKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILL 271
           PKRRGAE MEEFRPISCCNV+YKCIS+IL +RL +WLP FIS NQSAF+PGRSI DNILL
Sbjct: 421 PKRRGAERMEEFRPISCCNVIYKCISKILTDRLHVWLPSFISSNQSAFIPGRSIIDNILL 480

Query: 272 CQELREAALCVEGGPSEGVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLT 331
           CQEL        G P   ++ D  +        F FG+L+AIGTPL+FV W+RACVTS  
Sbjct: 481 CQELVGGYHLNSGKPRYTLKIDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSSM 540

Query: 332 FSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           FS+MINGS EGFF GRKG++Q D LS FLFVM+MEVL
Sbjct: 541 FSIMINGSFEGFFHGRKGVRQGDPLSPFLFVMVMEVL 577

[Close]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 6.0e-83
Identity = 166/277 (59.93%), Postives = 195/277 (70.40%), Query Frame = 0


Query: 92  GTRQSVHN-------RLFRGSLGSQPVGYRDLTTRIGDIVQFSWSEE------------- 151
           G+R S H+         F  SLGSQ +GYR+L+  I DIVQF WSEE             
Sbjct: 349 GSRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPIIDDIVQFQWSEECCQALQLPISREE 408

Query: 152 -GKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLI 211
             + LF M S KAPGPDGFSV FYK  WS+VG+DF + VL+FFE+CYLP  VN+TAITLI
Sbjct: 409 VRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDFCNAVLHFFETCYLPIGVNATAITLI 468

Query: 212 PKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILL 271
           PK  GAE +E+FRPISCCNV+YKCIS+ILA+RL LWLP FIS NQSAF+PGRSI +NILL
Sbjct: 469 PKHIGAERLEDFRPISCCNVLYKCISKILADRLRLWLPSFISSNQSAFIPGRSIIENILL 528

Query: 272 CQELREAALCVEGGPSEGVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLT 331
           CQEL        G P   ++ D  +        F FG+L+AIGTPL+FV W+RACVTS  
Sbjct: 529 CQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSSM 588

Query: 332 FSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           FS+MINGSLEGFF GRKGL+Q D LS FLFVM+MEVL
Sbjct: 589 FSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVMEVL 625

[Close]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 163/306 (53.27%), Postives = 198/306 (64.71%), Query Frame = 0


Query: 69  SVCAKVFWLVARFRRRRSDRRPGGTRQSVHNRL-------------FRGSLGSQPVGYRD 128
           S+  + FW   R  + R  R       SV +R+             F  SLGSQ +GYR+
Sbjct: 279 SLATETFWTAVRLEKPRFGRNLEFVVDSVCSRVSSHDGVAQMAVNYFSNSLGSQEIGYRE 338

Query: 129 LTTRIGDIVQFSWSEE--------------GKALFLMKSEKAPGPDGFSVDFYKATWSIV 188
           LT  I DIVQF WSEE               + LF M S KAPGPDGFSV F+K  WS++
Sbjct: 339 LTPIIDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVI 398

Query: 189 GDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISCCNVVYKCISRILAE 248
           G+DF D VL+FFE+ YLP  VN+TAITLIPK  GAE +E+FRPISCCNV+YKCIS+ILA+
Sbjct: 399 GEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILAD 458

Query: 249 RLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSEGVRFDQLR------ 308
           RL +WLP FIS NQSAF+ GRSI +NILLCQEL        G P   ++ D  +      
Sbjct: 459 RLRVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVN 518

Query: 309 --FSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFV 340
             F FG+ ++I TPL+FV W+ ACVTS  FS+MINGSLEGFF GRKG++Q D LS FLFV
Sbjct: 519 WDFLFGLQISISTPLKFVSWISACVTSPMFSIMINGSLEGFFHGRKGVRQGDPLSLFLFV 578

[Close]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL
Match: A0A5D3D7P6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00080 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 5.8e-78
Identity = 154/260 (59.23%), Postives = 184/260 (70.77%), Query Frame = 0


Query: 102 FRGSLGSQPVGYRDLTTRIGDIVQFSWSEE--------------GKALFLMKSEKAPGPD 161
           F  SLGSQ +GYR+LT  I DIVQF WSEE               + LF M S KAPGPD
Sbjct: 306 FSNSLGSQEIGYRELTPIIDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPD 365

Query: 162 GFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTAITLIPKRRGAECMEEFRPISC 221
           GFSV F+K  WS++G+DF D VL+FFE+ YLP  VN+TAITLIPK  GAE +E+FRPISC
Sbjct: 366 GFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISC 425

Query: 222 CNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFDNILLCQELREAALCVEGGPSE 281
           CNV+YKCIS+ILA+RL +WLP FIS NQSAF+ GRSI +NILLCQEL        G P  
Sbjct: 426 CNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRC 485

Query: 282 GVRFDQLR--------FSFGVLLAIGTPLQFVRWVRACVTSLTFSVMINGSLEGFFPGRK 340
            ++ D  +        F FG+ ++I TPL+FV W+ ACVTS  FS+MINGSLEGFF GRK
Sbjct: 486 TLKVDLQKAYDSVNWDFLFGLQISISTPLKFVSWISACVTSPMFSIMINGSLEGFFHGRK 545

[Close]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL
Match: A0A5D3CLU1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00420 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 133/221 (60.18%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 127 SWSEEGKALFLMKSEKAPGPDGFSVDFYKATWSIVGDDFYDVVLNFFESCYLPGEVNSTA 186
           S  E  + LF M S KAPG DGFSV F+K  W +VG+DF D VL+FFE+CYLP  VN+TA
Sbjct: 132 SREEVRRVLFSMDSGKAPGSDGFSVGFFKGAWFVVGEDFCDAVLHFFETCYLPVGVNATA 191

Query: 187 ITLIPKRRGAECMEEFRPISCCNVVYKCISRILAERLWLWLPYFISGNQSAFVPGRSIFD 246
           ITLIPK  GA+ +E+FRPISCCNV+YKCIS+IL +RL +WLP FIS NQSAF+ GRSI +
Sbjct: 192 ITLIPKHNGAKRLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIE 251

Query: 247 NILLCQELREAALCVEGGPSEGVRFD--------QLRFSFGVLLAIGTPLQFVRWVRACV 306
           NILLCQEL        G P   ++ D           F FG+L+AIGTPL+FV W+R CV
Sbjct: 252 NILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWNFLFGLLIAIGTPLKFVSWIRTCV 311

Query: 307 TSLTFSVMINGSLEGFFPGRKGLKQEDLLSHFLFVMMMEVL 340
           TS  FS+MINGSLEG F GRK ++Q + LS FLFVM+MEVL
Sbjct: 312 TSPMFSIMINGSLEGVFHGRKDVRQGNPLSPFLFVMVMEVL 352

The following BLAST results are available for this feature:

BLAST of Bhi12G000019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	1.3e-16	46.99	DNAse I-like superfamily protein	[more]

BLAST of Bhi12G000019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	1.8e-20	30.23	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P08548	1.3e-15	29.07	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
O00370	6.7e-15	26.94	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P11369	3.3e-14	27.78	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P16423	1.8e-07	25.70	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS...	[more]

BLAST of Bhi12G000019 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065355.1	2.5e-83	60.29	F17F8.5 [Cucumis melo var. makuwa] >TYK20852.1 F17F8.5 [Cucumis melo var. makuwa...	[more]
KAA0046851.1	1.2e-82	59.93	uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]	[more]
KAA0057642.1	2.4e-78	53.27	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK19523.1	1.2e-77	59.23	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_031745730.1	3.8e-76	58.98	uncharacterized protein LOC116406187 [Cucumis sativus]	[more]

BLAST of Bhi12G000019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHU9	1.2e-83	60.29	F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00030 PE=4 S...	[more]
A0A5A7TZS0	6.0e-83	59.93	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UP65	1.2e-78	53.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3D7P6	5.8e-78	59.23	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A5D3CLU1	2.7e-67	60.18	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 190..341 e-value: 4.6E-18 score: 65.6
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 131..340
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 131..340
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 135..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000019	Bhi12M000019	mRNA