Bhi11G002570 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002570
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 83494974 .. 83495796 (-)
RNA-Seq ExpressionBhi11G002570
SyntenyBhi11G002570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTGTTGGATATTCTTCCCTTCATAGCGAATTTGGTGGGGAAGTGGGTGGATCTTGATCCTAGGTGTCCCCTGTGTGGTGGGAAGCCTGAGACGTCAGTACATGTGTTTTGGAGATATAAGAAGGTGAAATGTATTTGGAATTGTCTTTTTGGCCCTTATGTTGGTTATTTTCTGTATGACAGGGACTCTAGAACATTGACGTGGATCGCTTGTCATGGCTTTGCGAACATGGTGAGCCAGATGGTGTCCTGTTATTGCTGATGGCATTATGGCAAATTTAGACTCTTCGGAACCATGTGGTGTTCCAGAGGGAGAGGGGTGGAGGCTTCCATTTCCATGTTGGTTGAGGCAATTCGTGCTTCTTTGGCTGTGTTCGAGGGGCCTGCTAGTTCGACTATGGTTGTTTTGAATCATCGTCTTGGGTTGTTAGGTGTTGAAAAGTGCCCTCGTTGGTTACTCCCCTCATCCGACCTTCATTTGTCTTGTGACGCAAGATAAAGACAAATGGGTGGGGGCTTTGGGTCGGGTCTTGCGAGATGGTAATGGGAGGCCTTATGGGGTGGGTTGCAGTCATGTGTGTGGTGAGTTTGATCTACTGATGTTAGAGGTTTGGGCTACTGCTAATTGGTTGAAGGTTGTTGCCTCTCGGGGTTTGTGTTCTATTATTGTTGAGTTTGATAGCTTATCTACGATGCGTTTATTGTGGGATAAGGAGATTAATTTGACTAATGTTCGTTCTGTGGTGGATGAGATTTTGGAGGTGAACACGGATGGAATCGTGCATCAATTTAGACATATTAAGTGGTCTCAGAACTAG

mRNA sequence

ATGGTGTTGTTGGATATTCTTCCCTTCATAGCGAATTTGGTGGGGAAGTGGGTGGATCTTGATCCTAGGTGTCCCCTGTGTGGTGGGAAGCCTGAGACGGACTCTAGAACATTGACGTGGATCGCTTGTCATGGCTTTGCGAACATGGTGTTGAAAAGTGCCCTCGTTGGTTACTCCCCTCATCCGACCTTCATTTGTCTTGTGACGCAAGATAAAGACAAATGGGTGGGGGCTTTGGGTCGGGTCTTGCGAGATGGTAATGGGAGGCCTTATGGGGTGGGTTGCAGTCATGTGTGTGGTGAGTTTGATCTACTGATGTTAGAGGTTTGGGCTACTGCTAATTGGTTGAAGGTTGTTGCCTCTCGGGGTTTGTGTTCTATTATTGTTGAGTTTGATAGCTTATCTACGATGCGTTTATTGTGGGATAAGGAGATTAATTTGACTAATGTTCGTTCTGTGGTGGATGAGATTTTGGAGGTGAACACGGATGGAATCGTGCATCAATTTAGACATATTAAGTGGTCTCAGAACTAG

Coding sequence (CDS)

ATGGTGTTGTTGGATATTCTTCCCTTCATAGCGAATTTGGTGGGGAAGTGGGTGGATCTTGATCCTAGGTGTCCCCTGTGTGGTGGGAAGCCTGAGACGGACTCTAGAACATTGACGTGGATCGCTTGTCATGGCTTTGCGAACATGGTGTTGAAAAGTGCCCTCGTTGGTTACTCCCCTCATCCGACCTTCATTTGTCTTGTGACGCAAGATAAAGACAAATGGGTGGGGGCTTTGGGTCGGGTCTTGCGAGATGGTAATGGGAGGCCTTATGGGGTGGGTTGCAGTCATGTGTGTGGTGAGTTTGATCTACTGATGTTAGAGGTTTGGGCTACTGCTAATTGGTTGAAGGTTGTTGCCTCTCGGGGTTTGTGTTCTATTATTGTTGAGTTTGATAGCTTATCTACGATGCGTTTATTGTGGGATAAGGAGATTAATTTGACTAATGTTCGTTCTGTGGTGGATGAGATTTTGGAGGTGAACACGGATGGAATCGTGCATCAATTTAGACATATTAAGTGGTCTCAGAACTAG

Protein sequence

MVLLDILPFIANLVGKWVDLDPRCPLCGGKPETDSRTLTWIACHGFANMVLKSALVGYSPHPTFICLVTQDKDKWVGALGRVLRDGNGRPYGVGCSHVCGEFDLLMLEVWATANWLKVVASRGLCSIIVEFDSLSTMRLLWDKEINLTNVRSVVDEILEVNTDGIVHQFRHIKWSQN
Homology
The following BLAST results are available for this feature:
BLAST of Bhi11G002570 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002570 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002570 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002570 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 73..177
e-value: 5.3E-8
score: 32.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002570Bhi11M002570mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity