Bhi11G002497 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002497
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 81437386 .. 81438003 (+)
RNA-Seq ExpressionBhi11G002497
SyntenyBhi11G002497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTAATGAGTTATGCTGATGAAAGTACTGATTTTGTTAATAGTATACTCAACCCTGAACGGTATTCTTCTATCCCTAGTAATAAAGATGAGAAGAATCTTAATGTTGTAAATTCTAAAGGAAATGATCATTCACTTGATGTTTTATCAAATGTTATTACATCTGGGATTTTAAATAAGGATGATATTGATCATAATAAGTCTAGCTCTAGTGAGACGGTATTGCCCTCTGAGCGTGTTCAATCTAAGAATAACACGGAGAATACTCATCTTGTTGAGTCTACTGACGTGACTATTGATGATATTGAGAAGAAAACCTTTGATGATTCTGATGAAGAACATGAAAGCGAAGATATGTCCAATTCGGCTAAGGACGTATCAAATGACAACATCCCAATTAACCAACTATATCGAAAAGGAAAGAAGAAAATGAGTGATGCTGGTCAAAGATCCTCTAAACCAAGGGATGATGACAAATGTTCTGATTCTGAGTGGATTGATGAGCAAAATGAACATCCTGAGTCTGAAAGACCTTTTGATAGTCTTCCTAAAATTCAAGAGAAGCAACCAACTAAGCAAACCAAGAAAAAATCATCTTCAAAATCTATTTCTATT

mRNA sequence

ATGCCCTTAATGAGTTATGCTGATGAAAGTACTGATTTTGTTAATAGTATACTCAACCCTGAACGGTATTCTTCTATCCCTAGTAATAAAGATGAGAAGAATCTTAATGTTGTAAATTCTAAAGGAAATGATCATTCACTTGATGTTTTATCAAATGTTATTACATCTGGGATTTTAAATAAGGATGATATTGATCATAATAAGTCTAGCTCTAGTGAGACGGTATTGCCCTCTGAGCGTGTTCAATCTAAGAATAACACGGAGAATACTCATCTTGTTGAGTCTACTGACGTGACTATTGATGATATTGAGAAGAAAACCTTTGATGATTCTGATGAAGAACATGAAAGCGAAGATATGTCCAATTCGGCTAAGGACGTATCAAATGACAACATCCCAATTAACCAACTATATCGAAAAGGAAAGAAGAAAATGAGTGATGCTGGTCAAAGATCCTCTAAACCAAGGGATGATGACAAATGTTCTGATTCTGAGTGGATTGATGAGCAAAATGAACATCCTGAGTCTGAAAGACCTTTTGATAGTCTTCCTAAAATTCAAGAGAAGCAACCAACTAAGCAAACCAAGAAAAAATCATCTTCAAAATCTATTTCTATT

Coding sequence (CDS)

ATGCCCTTAATGAGTTATGCTGATGAAAGTACTGATTTTGTTAATAGTATACTCAACCCTGAACGGTATTCTTCTATCCCTAGTAATAAAGATGAGAAGAATCTTAATGTTGTAAATTCTAAAGGAAATGATCATTCACTTGATGTTTTATCAAATGTTATTACATCTGGGATTTTAAATAAGGATGATATTGATCATAATAAGTCTAGCTCTAGTGAGACGGTATTGCCCTCTGAGCGTGTTCAATCTAAGAATAACACGGAGAATACTCATCTTGTTGAGTCTACTGACGTGACTATTGATGATATTGAGAAGAAAACCTTTGATGATTCTGATGAAGAACATGAAAGCGAAGATATGTCCAATTCGGCTAAGGACGTATCAAATGACAACATCCCAATTAACCAACTATATCGAAAAGGAAAGAAGAAAATGAGTGATGCTGGTCAAAGATCCTCTAAACCAAGGGATGATGACAAATGTTCTGATTCTGAGTGGATTGATGAGCAAAATGAACATCCTGAGTCTGAAAGACCTTTTGATAGTCTTCCTAAAATTCAAGAGAAGCAACCAACTAAGCAAACCAAGAAAAAATCATCTTCAAAATCTATTTCTATT

Protein sequence

MPLMSYADESTDFVNSILNPERYSSIPSNKDEKNLNVVNSKGNDHSLDVLSNVITSGILNKDDIDHNKSSSSETVLPSERVQSKNNTENTHLVESTDVTIDDIEKKTFDDSDEEHESEDMSNSAKDVSNDNIPINQLYRKGKKKMSDAGQRSSKPRDDDKCSDSEWIDEQNEHPESERPFDSLPKIQEKQPTKQTKKKSSSKSISI
Homology
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BLAST of Bhi11G002497 vs. NCBI nr
Match: XP_038882438.1 (uncharacterized protein LOC120073709 [Benincasa hispida])

HSP 1 Score: 161.4 bits (407), Expect = 8.4e-36
Identity = 89/134 (66.42%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 4   MSYADESTDFVNSILNPERYSSIPSNKDEKNLNVVNSKGNDHSLDVLSNVITSGILNKDD 63
           MSYA ESTDF+NSILNP    S PSN+D+KNLNVVNS+GN+HS+DVLSNV+TS +LN+DD
Sbjct: 1   MSYAGESTDFINSILNPGGNRSNPSNQDQKNLNVVNSEGNNHSIDVLSNVVTSRVLNEDD 60

Query: 64  IDHNKSSSSETVLPSERVQSKNNTENTHLVESTDVTIDDIEKKTFDDSDEEHESEDMSNS 123
           I  N+SS  ETV P ERV+ +N T+N H VE  DVTI++I +KT DDS+EE+ESED+S+ 
Sbjct: 61  ITQNESSPRETVFPFERVEIENETKNNHPVEFADVTINEIVEKTPDDSNEENESEDVSDF 120

Query: 124 AKDVSNDNIPINQL 138
           AKD+S+DNIPIN L
Sbjct: 121 AKDISDDNIPINYL 134

The following BLAST results are available for this feature:
BLAST of Bhi11G002497 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002497 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002497 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882438.18.4e-3666.42uncharacterized protein LOC120073709 [Benincasa hispida][more]
BLAST of Bhi11G002497 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002497Bhi11M002497mRNA