Bhi11G002494 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002494
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 81351955 .. 81352367 (-)
RNA-Seq ExpressionBhi11G002494
SyntenyBhi11G002494
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTTGCTGAATTTCAAGAATTAGTAGTTGATAAGCTATGTAGTATAGGCATTTCTGCTAATGTTGAGATTTTCGCATACATTAGATCAAAAGATTTTATGGAGAAGGATGTGAAACTTTCAGAAGAAAATGATGTTAAATGGTTGTTCCACATTATTGCTAGTGGGATTGAAACATATTGCTCATTGATTATTTTTTATTCAAATAACCCATCGATGGTCTTAGACAATATATCTCCCAGTGAAAAAAATGAGCAGTATTCCTAATGATGAAGGTCGTCATTATGAGACAATTGATTTGGCAAAGATTAACCCTAATTTCCAAGTTAAGATTGATAGTATGTTTATCGAAAGACATATTGTTGAATGCTATGCGAGTTTTTGCAATAAGAGATAACTTTCAATTGTAG

mRNA sequence

ATGCCCTTTGCTGAATTTCAAGAATTAGTAGTTGATAAGCTATGTAGTATAGGCATTTCTGCTAATGTTGAGATTTTCGCATACATTAGATCAAAAGATTTTATGGAGAAGGATGTGAAACTTTCAGAAGAAAATGATGTTAAATGGTTGTTCCACATTATTGCTACAGTATTCCTAATGATGAAGGTCGTCATTATGAGACAATTGATTTGGCAAAGATTAACCCTAATTTCCAAGTTAAGATTGATAGTATGTTTATCGAAAGACATATTGTTGAATGCTATGCGAGTTTTTGCAATAAGAGATAACTTTCAATTGTAG

Coding sequence (CDS)

ATGCCCTTTGCTGAATTTCAAGAATTAGTAGTTGATAAGCTATGTAGTATAGGCATTTCTGCTAATGTTGAGATTTTCGCATACATTAGATCAAAAGATTTTATGGAGAAGGATGTGAAACTTTCAGAAGAAAATGATGTTAAATGGTTGTTCCACATTATTGCTACAGTATTCCTAATGATGAAGGTCGTCATTATGAGACAATTGATTTGGCAAAGATTAACCCTAATTTCCAAGTTAAGATTGATAGTATGTTTATCGAAAGACATATTGTTGAATGCTATGCGAGTTTTTGCAATAAGAGATAACTTTCAATTGTAG

Protein sequence

MPFAEFQELVVDKLCSIGISANVEIFAYIRSKDFMEKDVKLSEENDVKWLFHIIATVFLMMKVVIMRQLIWQRLTLISKLRLIVCLSKDILLNAMRVFAIRDNFQL
Homology
[Close]
BLAST of Bhi11G002494 vs. NCBI nr
Match: XP_038889205.1 (probable polygalacturonase At1g80170 [Benincasa hispida])

HSP 1 Score: 73.9 bits (180), Expect = 9.1e-10
Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 1   MPFAEFQELVVDKLCSIGISANVEIFAYIRSKDFMEKDVKLSEENDVKWLFHIIAT 57
           M F EFQ+LVVDK+ S+G   NVEI A + SKDF++KD+KL E+ND++WLF++I++
Sbjct: 451 MSFLEFQQLVVDKISSVGNCGNVEIIACVGSKDFIKKDLKLREDNDIRWLFYLISS 506

The following BLAST results are available for this feature:
BLAST of Bhi11G002494 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002494 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002494 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889205.19.1e-1057.14probable polygalacturonase At1g80170 [Benincasa hispida][more]
BLAST of Bhi11G002494 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002494Bhi11M002494mRNA