Bhi11G002418 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002418
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionATP synthase subunit b, chloroplastic
Locationchr11: 78671183 .. 78671368 (-)
RNA-Seq ExpressionBhi11G002418
SyntenyBhi11G002418
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCGGATCAGTTTCGAGTTAATGGATACTCTAAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACACGACTTGGAGGGAGATATTTCATATCTTTCGAGATCCACCCTACAATATGGGCTTCCAGGTGGTATGAAAGAAAGATTCACACAAGAAAAGTGA

mRNA sequence

ATGGAAGCGGATCAGTTTCGAGTTAATGGATACTCTAAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACACGACTTGGAGGGAGATATTTCATATCTTTCGAGATCCACCCTACAATATGGGCTTCCAGGTGGTATGAAAGAAAGATTCACACAAGAAAAGTGA

Coding sequence (CDS)

ATGGAAGCGGATCAGTTTCGAGTTAATGGATACTCTAAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACACGACTTGGAGGGAGATATTTCATATCTTTCGAGATCCACCCTACAATATGGGCTTCCAGGTGGTATGAAAGAAAGATTCACACAAGAAAAGTGA

Protein sequence

MEADQFRVNGYSKIEREKLNLINSTSKSLEHDLEGDISYLSRSTLQYGLPGGMKERFTQEK
Homology
[Close]
BLAST of Bhi11G002418 vs. TAIR 10
Match: ATCG00130.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast )

HSP 1 Score: 50.4 bits (119), Expect = 5.8e-07
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 2   EADQFRVNGYSKIEREKLNLINSTSKSLE 31
           EAD+FRVNGYS+IEREKLNLINST K+L+
Sbjct: 91  EADKFRVNGYSEIEREKLNLINSTYKTLK 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match: Q4VZP7 (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match: Q09X31 (ATP synthase subunit b, chloroplastic OS=Morus indica OX=248361 GN=atpF PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-07
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 

Query: 2   EADQFRVNGYSKIEREKLNLINSTSKSLE 31
           EADQFRVNGYS+IEREKLNLINSTSK+LE
Sbjct: 91  EADQFRVNGYSEIEREKLNLINSTSKTLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match: A6MM22 (ATP synthase subunit b, chloroplastic OS=Buxus microphylla OX=153571 GN=atpF PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-07
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEAD+FRVNGYS+IEREKLNLINST K+LE
Sbjct: 90  MEADEFRVNGYSEIEREKLNLINSTYKNLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match: A0ZZ21 (ATP synthase subunit b, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpF PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-07
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINST K LE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTYKILE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match: Q2L8Z3 (ATP synthase subunit b, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpF PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-07
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINST K LE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTYKILE 119

[Close]
BLAST of Bhi11G002418 vs. NCBI nr
Match: YP_009325975.1 (ATP synthase CF0 B subunit [Citrullus lanatus] >YP_009348017.1 ATP synthase CF0 B subunit [Citrullus mucosospermus] >YP_009420780.1 ATP synthase CF0 B subunit [Citrullus colocynthis] >YP_009431543.1 ATP synthase CF0 B subunit [Citrullus amarus] >YP_009431628.1 ATP synthase CF0 B subunit [Citrullus rehmii] >YP_009456132.1 ATP synthase CF0 B subunit [Lagenaria siceraria] >APW82447.1 ATP synthase CF0 B subunit [Citrullus lanatus subsp. vulgaris] >ASY97461.1 ATP synthase CF0 B subunit [Cucumis sativus var. hardwickii] >QNM38517.1 ATP synthase CF0 subunit I [Lagenaria siceraria var. microcarpa] >APD52466.1 ATP synthase CF0 B subunit [Citrullus lanatus] >APW82532.1 ATP synthase CF0 B subunit [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 91  MEADQFRVNGYSEIEREKLNLINSTSKSLE 120

[Close]
BLAST of Bhi11G002418 vs. NCBI nr
Match: AHM91169.1 (ATP synthase CF0 subunit I [Lagenaria siceraria])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. NCBI nr
Match: YP_009752990.1 (CF0 subunit I [Gerrardanthus macrorhizus] >QIT06062.1 CF0 subunit I [Gerrardanthus macrorhizus])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. NCBI nr
Match: YP_009440143.1 (ATP synthase CF0 B subunit [Gynostemma longipes] >ANI25171.1 ATP synthase CF0 B subunit [Gynostemma pentaphyllum] >ART64986.1 ATP synthase CF0 B subunit [Gynostemma pentaphyllum] >ATG86914.1 ATP synthase CF0 B subunit [Gynostemma longipes])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. NCBI nr
Match: YP_009751892.1 (CF0 subunit I [Cyclanthera pedata] >QIT04710.1 CF0 subunit I [Cyclanthera pedata] >QWQ50073.1 ATP synthase CF0 subunit I [Cyclanthera pedata])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match: A0A218KG26 (ATP synthase subunit b, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match: A0A1X9Q1S9 (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match: A0A249RZG2 (ATP synthase subunit b, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 91  MEADQFRVNGYSEIEREKLNLINSTSKSLE 120

[Close]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match: A0A191T450 (ATP synthase subunit b, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 90  MEADQFRVNGYSEIEREKLNLINSTSKSLE 119

[Close]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match: A0A1P8LDX5 (ATP synthase CF0 B subunit OS=Citrullus mucosospermus OX=519315 GN=atpF PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MEADQFRVNGYSKIEREKLNLINSTSKSLE 31
           MEADQFRVNGYS+IEREKLNLINSTSKSLE
Sbjct: 91  MEADQFRVNGYSEIEREKLNLINSTSKSLE 120

The following BLAST results are available for this feature:
BLAST of Bhi11G002418 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00130.15.8e-0782.76ATPase, F0 complex, subunit B/B', bacterial/chloroplast [more]
BLAST of Bhi11G002418 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZP72.3e-0896.67ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV... [more]
Q09X311.9e-0793.10ATP synthase subunit b, chloroplastic OS=Morus indica OX=248361 GN=atpF PE=3 SV=... [more]
A6MM225.6e-0786.67ATP synthase subunit b, chloroplastic OS=Buxus microphylla OX=153571 GN=atpF PE=... [more]
A0ZZ215.6e-0790.00ATP synthase subunit b, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpF PE... [more]
Q2L8Z35.6e-0790.00ATP synthase subunit b, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpF PE=3... [more]
BLAST of Bhi11G002418 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009325975.11.7e-0596.67ATP synthase CF0 B subunit [Citrullus lanatus] >YP_009348017.1 ATP synthase CF0 ... [more]
AHM91169.11.7e-0596.67ATP synthase CF0 subunit I [Lagenaria siceraria][more]
YP_009752990.11.7e-0596.67CF0 subunit I [Gerrardanthus macrorhizus] >QIT06062.1 CF0 subunit I [Gerrardanth... [more]
YP_009440143.11.7e-0596.67ATP synthase CF0 B subunit [Gynostemma longipes] >ANI25171.1 ATP synthase CF0 B ... [more]
YP_009751892.11.7e-0596.67CF0 subunit I [Cyclanthera pedata] >QIT04710.1 CF0 subunit I [Cyclanthera pedata... [more]
BLAST of Bhi11G002418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A218KG268.4e-0696.67ATP synthase subunit b, chloroplastic OS=Cucumis sativus var. hardwickii OX=3192... [more]
A0A1X9Q1S98.4e-0696.67ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV... [more]
A0A249RZG28.4e-0696.67ATP synthase subunit b, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658... [more]
A0A191T4508.4e-0696.67ATP synthase subunit b, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=at... [more]
A0A1P8LDX58.4e-0696.67ATP synthase CF0 B subunit OS=Citrullus mucosospermus OX=519315 GN=atpF PE=3 SV=... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002418Bhi11M002418mRNA