Bhi11G002325 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002325
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022231
Locationchr11: 75262262 .. 75262450 (+)
RNA-Seq ExpressionBhi11G002325
SyntenyBhi11G002325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAACTAGAAAAGATATCGAGGAAATAAAAGAAAAGATGGAAACTATTCTTTATATGTTGGAGAAGGGCAAATTCACAATCGATATAACTCAACCCAGTACTACAACTGCGACAAATTTGCCACCGTATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAAT

mRNA sequence

ATGGAAAAAACTAGAAAAGATATCGAGGAAATAAAAGAAAAGATGGAAACTATTCTTTATATGTTGGAGAAGGGCAAATTCACAATCGATATAACTCAACCCAGTACTACAACTGCGACAAATTTGCCACCGTATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAAT

Coding sequence (CDS)

ATGGAAAAAACTAGAAAAGATATCGAGGAAATAAAAGAAAAGATGGAAACTATTCTTTATATGTTGGAGAAGGGCAAATTCACAATCGATATAACTCAACCCAGTACTACAACTGCGACAAATTTGCCACCGTATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAAT

Protein sequence

MEKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTTATNLPPYPPIEGFIPKYTAYNPLYN
Homology
[Close]
BLAST of Bhi11G002325 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTT-----ATNLPPYPP--------- 61
          EKTRKDIEE++EK++ I   LEKGK T D   P+T++         PPYPP         
Sbjct: 9  EKTRKDIEELREKLDXIXLXLEKGKATAD---PATSSNPIHEPQETPPYPPGYGPPLRPV 68

Query: 62 IEGFIPKYTAYNPLYN 64
           EGF+P+YT YNPLY+
Sbjct: 69 AEGFMPQYTTYNPLYD 81

[Close]
BLAST of Bhi11G002325 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTTATNLPPYPP-------------- 61
          EKTRKDIEE++EK++ IL  LEKGK   + + P     T  P +PP              
Sbjct: 10 EKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPPT--PQFPPGFEPSFRPAGPSFR 69

Query: 62 --IEGFIPKYTAYNPLYN 64
             EGF+ +YT YNPLY+
Sbjct: 70 PMTEGFMSQYTTYNPLYD 85

[Close]
BLAST of Bhi11G002325 vs. NCBI nr
Match: XP_022149382.1 (uncharacterized protein LOC111017812 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 4.4e-04
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTT--ATNLPPY-----PPI----EG 61
          EK RKDIEE++EK++ IL  LEKGK   D T  S        +PPY     PP+    EG
Sbjct: 9  EKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDPPLRLVAEG 68

Query: 62 FIPKYTAYNPLYN 64
          F+ + T YNPLY+
Sbjct: 69 FMQQNTTYNPLYD 81

[Close]
BLAST of Bhi11G002325 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.0e-07
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTT-----ATNLPPYPP--------- 61
          EKTRKDIEE++EK++ I   LEKGK T D   P+T++         PPYPP         
Sbjct: 9  EKTRKDIEELREKLDXIXLXLEKGKATAD---PATSSNPIHEPQETPPYPPGYGPPLRPV 68

Query: 62 IEGFIPKYTAYNPLYN 64
           EGF+P+YT YNPLY+
Sbjct: 69 AEGFMPQYTTYNPLYD 81

[Close]
BLAST of Bhi11G002325 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTTATNLPPYPP-------------- 61
          EKTRKDIEE++EK++ IL  LEKGK   + + P     T  P +PP              
Sbjct: 10 EKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPPT--PQFPPGFEPSFRPAGPSFR 69

Query: 62 --IEGFIPKYTAYNPLYN 64
             EGF+ +YT YNPLY+
Sbjct: 70 PMTEGFMSQYTTYNPLYD 85

[Close]
BLAST of Bhi11G002325 vs. ExPASy TrEMBL
Match: A0A6J1D7T3 (uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017812 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0 

Query: 2  EKTRKDIEEIKEKMETILYMLEKGKFTIDITQPSTTT--ATNLPPY-----PPI----EG 61
          EK RKDIEE++EK++ IL  LEKGK   D T  S        +PPY     PP+    EG
Sbjct: 9  EKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDPPLRLVAEG 68

Query: 62 FIPKYTAYNPLYN 64
          F+ + T YNPLY+
Sbjct: 69 FMQQNTTYNPLYD 81

The following BLAST results are available for this feature:
BLAST of Bhi11G002325 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002325 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G002325 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157796.11.2e-0648.68LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia][more]
XP_022155098.13.4e-0442.31LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch... [more]
XP_022149382.14.4e-0446.58uncharacterized protein LOC111017812 [Momordica charantia][more]
BLAST of Bhi11G002325 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZ906.0e-0748.68Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1[more]
A0A6J1DM291.6e-0442.31LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia... [more]
A0A6J1D7T32.1e-0446.58uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002325Bhi11M002325mRNA