Bhi11G002319 (gene) Wax gourd (B227) v1

Overview
NameBhi11G002319
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr11: 74932594 .. 74933312 (-)
RNA-Seq ExpressionBhi11G002319
SyntenyBhi11G002319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGAAAATGTCGAGCCTTCTCTGTTTTCTTACAAAATCTTAATAGATGCTAAAGGGCTATCAAATGACATGATAGGGATGGAACAAGTTGTTGATACAATGAAGACCGAAGGAATTGAGCTCGATGTTTCTGCACTTTCCATATTAGCTAAGCACTATGCTTCTGGTGGGCTTAAAGATTGCCAAGGCCATTTTAAAGAAGATGGAAGATGTTAACACTAAAGGTTCTCAATGGCCTTGCAGAATTTTACTTCCCCTTTATGGAGAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGAAGATCTGTGAGTCAAATCCTTCTATCAAAGAATACATGGTTGCCATTGTCACATAGGGAGAGCTGAAGAACATCCCAGAAGCAGAGAAAAATTTTGATTGTAAAAACATGGAAGCTGTCCTCAAAACAATATTCTACCATGTTGAAGGTTTATGCAGGCAACAAGATGCTGGTGAAGGGCAAGGAACTAGTTAAGCAGATGGCAGACAACGGTTGCCGCATTGGTCTGTTGACATGGAATGTAGTTGTGAAGCTCTATGTGGAAGTTGGGGAAGTAGAAAAAGCAGACTCTTTTTTGGTTAAGGCTGTTCAAAAAAATCAGATGAAGCCATTGTCTACCTCATACATGATTATCATGGTGTATGCAAGGAAGGGGATATACACAATGCAGAGAAAATCTTTTATAGGTTGA

mRNA sequence

ATGGAGAGAGAAAATGTCGAGCCTTCTCTGTTTTCTTACAAAATCTTAATAGATGCTAAAGGGCTATCAAATGACATGATAGGGATGGAACAAGTTGTTGATACAATGAAGACCGAAGGAATTGAGCTCGATGTTTCTGCACTTTCCATATTAGCTAAGCACTATGCTTCTGGTGGGCTTAAAGATTGCCAAGGCCATTTTAAAGAAGATGGAAGATGCAACAAGATGCTGGTGAAGGGCAAGGAACTAGTTAAGCAGATGGCAGACAACGGTTGCCGCATTGGTCTGTTGACATGGAATGTAGTTGTGAAGCTCTATGTGGAAGTTGGGGAAGTAGAAAAAGCAGACTCTTTTTTGGTTAAGGCTGTTCAAAAAAATCAGATGAAGCCATTGTCTACCTCATACATGATTATCATGGTGTATGCAAGGAAGGGGATATACACAATGCAGAGAAAATCTTTTATAGGTTGA

Coding sequence (CDS)

ATGGAGAGAGAAAATGTCGAGCCTTCTCTGTTTTCTTACAAAATCTTAATAGATGCTAAAGGGCTATCAAATGACATGATAGGGATGGAACAAGTTGTTGATACAATGAAGACCGAAGGAATTGAGCTCGATGTTTCTGCACTTTCCATATTAGCTAAGCACTATGCTTCTGGTGGGCTTAAAGATTGCCAAGGCCATTTTAAAGAAGATGGAAGATGCAACAAGATGCTGGTGAAGGGCAAGGAACTAGTTAAGCAGATGGCAGACAACGGTTGCCGCATTGGTCTGTTGACATGGAATGTAGTTGTGAAGCTCTATGTGGAAGTTGGGGAAGTAGAAAAAGCAGACTCTTTTTTGGTTAAGGCTGTTCAAAAAAATCAGATGAAGCCATTGTCTACCTCATACATGATTATCATGGTGTATGCAAGGAAGGGGATATACACAATGCAGAGAAAATCTTTTATAGGTTGA

Protein sequence

MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGLKDCQGHFKEDGRCNKMLVKGKELVKQMADNGCRIGLLTWNVVVKLYVEVGEVEKADSFLVKAVQKNQMKPLSTSYMIIMVYARKGIYTMQRKSFIG
Homology
BLAST of Bhi11G002319 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 86/232 (37.07%), Postives = 120/232 (51.72%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGG- 60
           +E+EN++P+L +YKILID KG SND+ GMEQ+V+TMK+EG+ELD+ A +++A+HYAS G 
Sbjct: 287 LEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGL 346

Query: 61  -------LKDCQGHFKEDGR-------------------------C-------------- 120
                  LK+ +G   E+ R                         C              
Sbjct: 347 KEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAIL 406

Query: 121 ---------------------------------------NKMLVKGKELVKQMADNGCRI 146
                                                  +KM+ +GK+LVKQM+D+GC I
Sbjct: 407 AFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNI 466

BLAST of Bhi11G002319 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 83/242 (34.30%), Postives = 117/242 (48.35%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+EN++PSL +YKILID KG +ND+ GMEQ+++TMK EG+ELD    ++ A+HY+  GL
Sbjct: 289 MEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGL 348

Query: 61  KD-------------------------------------------CQG--HFKED----- 120
           KD                                           C+   +F+E      
Sbjct: 349 KDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQ 408

Query: 121 --GRCN----------------------------------KMLVKGKELVKQMADNGCRI 156
             G+ N                                  KML KGK+LVK+MA++GCRI
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468

BLAST of Bhi11G002319 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 83/242 (34.30%), Postives = 117/242 (48.35%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+EN++PSL +YKILID KG +ND+ GMEQ+++TMK EG+ELD    ++ A+HY+  GL
Sbjct: 289 MEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGL 348

Query: 61  KD-------------------------------------------CQG--HFKED----- 120
           KD                                           C+   +F+E      
Sbjct: 349 KDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQ 408

Query: 121 --GRCN----------------------------------KMLVKGKELVKQMADNGCRI 156
             G+ N                                  KML KGK+LVK+MA++GCRI
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468

BLAST of Bhi11G002319 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 83/242 (34.30%), Postives = 117/242 (48.35%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+EN++PSL +YKILID KG +ND+ GMEQ+++TMK EG+ELD    ++ A+HY+  GL
Sbjct: 289 MEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGL 348

Query: 61  KD-------------------------------------------CQG--HFKED----- 120
           KD                                           C+   +F+E      
Sbjct: 349 KDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQ 408

Query: 121 --GRCN----------------------------------KMLVKGKELVKQMADNGCRI 156
             G+ N                                  KML KGK+LVK+MA++GCRI
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468

BLAST of Bhi11G002319 vs. TAIR 10
Match: AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-24
Identity = 76/242 (31.40%), Postives = 109/242 (45.04%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           MEREN++PS  +Y  LI++KGL+ D+ GME++V+T+K EGIELD    SILAK+Y   GL
Sbjct: 302 MERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGL 361

Query: 61  KD----------------------------------------------------CQGHFK 120
           K+                                                    C    K
Sbjct: 362 KERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPRYDNCISAIK 421

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 156
             G+                                   NKML KG++LVK+M + G  I
Sbjct: 422 AWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAI 481

BLAST of Bhi11G002319 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-32
Identity = 86/232 (37.07%), Postives = 120/232 (51.72%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGG- 60
           +E+EN++P+L +YKILID KG SND+ GMEQ+V+TMK+EG+ELD+ A +++A+HYAS G 
Sbjct: 287 LEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGL 346

Query: 61  -------LKDCQGHFKEDGR-------------------------C-------------- 120
                  LK+ +G   E+ R                         C              
Sbjct: 347 KEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAIL 406

Query: 121 ---------------------------------------NKMLVKGKELVKQMADNGCRI 146
                                                  +KM+ +GK+LVKQM+D+GC I
Sbjct: 407 AFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNI 466

BLAST of Bhi11G002319 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-28
Identity = 83/242 (34.30%), Postives = 117/242 (48.35%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+EN++PSL +YKILID KG +ND+ GMEQ+++TMK EG+ELD    ++ A+HY+  GL
Sbjct: 289 MEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGL 348

Query: 61  KD-------------------------------------------CQG--HFKED----- 120
           KD                                           C+   +F+E      
Sbjct: 349 KDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQ 408

Query: 121 --GRCN----------------------------------KMLVKGKELVKQMADNGCRI 156
             G+ N                                  KML KGK+LVK+MA++GCRI
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468

BLAST of Bhi11G002319 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 76/242 (31.40%), Postives = 109/242 (45.04%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           MEREN++PS  +Y  LI++KGL+ D+ GME++V+T+K EGIELD    SILAK+Y   GL
Sbjct: 302 MERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGL 361

Query: 61  KD----------------------------------------------------CQGHFK 120
           K+                                                    C    K
Sbjct: 362 KERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPRYDNCISAIK 421

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 156
             G+                                   NKML KG++LVK+M + G  I
Sbjct: 422 AWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAI 481

BLAST of Bhi11G002319 vs. ExPASy Swiss-Prot
Match: Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-05
Identity = 35/135 (25.93%), Postives = 60/135 (44.44%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME   V+P + ++  L++A     DM   E++   M   GI+ D+ A SILAK YA  G 
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651

Query: 61  KDCQGHFKEDGRCNKMLVKGKELVKQMADNGCRIGLLTWNVVVKLYVEVGEVEKADSFLV 120
            +                K ++++ QM   G R  ++ +  ++  +   GE++KA     
Sbjct: 652 PE----------------KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 710

Query: 121 KAVQKNQMKPLSTSY 136
           K      + P  T+Y
Sbjct: 712 KMCGIVGLSPNLTTY 710

BLAST of Bhi11G002319 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04
Identity = 40/166 (24.10%), Postives = 70/166 (42.17%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           M RE V PS+ +Y  +I      +++     + + M   G E +V+  ++L +     G 
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG- 350

Query: 61  KDCQGHFKEDGRCNKMLVKGKELVKQMADNGCRIGLLTWNVVVKLYVEVGEVEKADSFLV 120
                             +G+EL+++M + GC     T+N++++ Y E  EVEKA     
Sbjct: 351 ---------------EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 410

Query: 121 KAVQKNQMKPLSTSYMII-----------MVYARKGIYTMQRKSFI 156
           K    + +  L T  ++I           MV A K +  M  + FI
Sbjct: 411 KMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFI 440

BLAST of Bhi11G002319 vs. NCBI nr
Match: XP_038906081.1 (pentatricopeptide repeat-containing protein At1g15480, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-48
Identity = 127/232 (54.74%), Postives = 132/232 (56.90%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           MERENV+PS+FSYKILIDAKGLSNDMIGMEQVVDTMK EGIELDVSALS LAKHYASGGL
Sbjct: 318 MERENVKPSMFSYKILIDAKGLSNDMIGMEQVVDTMKAEGIELDVSALSKLAKHYASGGL 377

Query: 61  KD-------------------------------------------CQGHFKEDGRC---- 120
           KD                                           C+ +    G C    
Sbjct: 378 KDKAKVILKEIEDVNTKGSRWPCRILLPLYGELQMEDEVRRLWKICESN-PSIGECMAAI 437

Query: 121 ---------------------------------------NKMLVKGKELVKQMADNGCRI 146
                                                  NKMLVKGKELVKQMADNGCRI
Sbjct: 438 VAWGKLKNIPEAEKIFDRVVKTWKQSPKQYSTMLKVYADNKMLVKGKELVKQMADNGCRI 497

BLAST of Bhi11G002319 vs. NCBI nr
Match: XP_023539395.1 (uncharacterized protein LOC111800051 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 120/241 (49.79%), Postives = 130/241 (53.94%), Query Frame = 0

Query: 1    MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
            ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 900  MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 959

Query: 61   KD----------------------------------------------------CQGHFK 120
            KD                                                    C     
Sbjct: 960  KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIV 1019

Query: 121  EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
              G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 1020 AWGKLKNVQEAEEIFDRVSKTWKNLSSKQYSTLLKVYADNKMLTKGKDLVKQMADSGCRI 1079

BLAST of Bhi11G002319 vs. NCBI nr
Match: XP_022933474.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 120/241 (49.79%), Postives = 130/241 (53.94%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 311 MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 370

Query: 61  KD----------------------------------------------------CQGHFK 120
           KD                                                    C     
Sbjct: 371 KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIV 430

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 431 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 490

BLAST of Bhi11G002319 vs. NCBI nr
Match: XP_023539396.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023540094.1 pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 120/241 (49.79%), Postives = 130/241 (53.94%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 315 MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 374

Query: 61  KD----------------------------------------------------CQGHFK 120
           KD                                                    C     
Sbjct: 375 KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIV 434

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 435 AWGKLKNVQEAEEIFDRVSKTWKNLSSKQYSTLLKVYADNKMLTKGKDLVKQMADSGCRI 494

BLAST of Bhi11G002319 vs. NCBI nr
Match: KAG6596160.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-44
Identity = 121/241 (50.21%), Postives = 131/241 (54.36%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 311 MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 370

Query: 61  KD-------------------------------------------CQ------------- 120
           KD                                           C+             
Sbjct: 371 KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEESMAAIV 430

Query: 121 --GHFKEDGRC----------------------------NKMLVKGKELVKQMADNGCRI 155
             G  K                                 NKML KGK+LVKQMAD+GCRI
Sbjct: 431 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 490

BLAST of Bhi11G002319 vs. ExPASy TrEMBL
Match: A0A6J1EZV3 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440876 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.1e-45
Identity = 120/241 (49.79%), Postives = 130/241 (53.94%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 311 MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 370

Query: 61  KD----------------------------------------------------CQGHFK 120
           KD                                                    C     
Sbjct: 371 KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMAAIV 430

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 431 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 490

BLAST of Bhi11G002319 vs. ExPASy TrEMBL
Match: A0A6J1F506 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440885 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44
Identity = 118/241 (48.96%), Postives = 130/241 (53.94%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 311 MEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 370

Query: 61  KD----------------------------------------------------CQGHFK 120
           KD                                                    C     
Sbjct: 371 KDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKLCEANPRIEECMAAIV 430

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 431 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 490

BLAST of Bhi11G002319 vs. ExPASy TrEMBL
Match: A0A6J1I524 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469986 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 118/241 (48.96%), Postives = 129/241 (53.53%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV  LSILAKHYASGGL
Sbjct: 315 MEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVHTLSILAKHYASGGL 374

Query: 61  KD----------------------------------------------------CQGHFK 120
           KD                                                    C     
Sbjct: 375 KDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWKICEANPRIEECMAAIV 434

Query: 121 EDGRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 435 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 494

BLAST of Bhi11G002319 vs. ExPASy TrEMBL
Match: A0A6J1I643 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469985 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 118/241 (48.96%), Postives = 133/241 (55.19%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 363 MEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 422

Query: 61  KD-------------------------------------------CQGHFKED------- 120
            D                                           C+ + + D       
Sbjct: 423 IDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWKICEANPRMDECMAAIV 482

Query: 121 --GRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 483 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 542

BLAST of Bhi11G002319 vs. ExPASy TrEMBL
Match: A0A6J1I2N1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469987 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 118/241 (48.96%), Postives = 133/241 (55.19%), Query Frame = 0

Query: 1   MERENVEPSLFSYKILIDAKGLSNDMIGMEQVVDTMKTEGIELDVSALSILAKHYASGGL 60
           ME+ENV+PSLF+YKILIDAKGLSNDM+GMEQVVDTMK EGIELDV+ LSILAKHYASGGL
Sbjct: 315 MEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVNTLSILAKHYASGGL 374

Query: 61  KD-------------------------------------------CQGHFKED------- 120
            D                                           C+ + + D       
Sbjct: 375 IDKAKAILKEMEDVSSKESRWPCRILLPLYGELQIEDEVRRVWKICEANPRMDECMAAIV 434

Query: 121 --GRC----------------------------------NKMLVKGKELVKQMADNGCRI 155
             G+                                   NKML KGK+LVKQMAD+GCRI
Sbjct: 435 AWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSGCRI 494

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G15480.13.1e-3337.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G80270.14.7e-2934.30PENTATRICOPEPTIDE REPEAT 596 [more]
AT1G80270.24.7e-2934.30PENTATRICOPEPTIDE REPEAT 596 [more]
AT1G80270.34.7e-2934.30PENTATRICOPEPTIDE REPEAT 596 [more]
AT3G15590.17.8e-2431.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
Match NameE-valueIdentityDescription
Q9XI214.4e-3237.07Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop... [more]
Q9C9776.6e-2834.30Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop... [more]
Q9LRP61.1e-2231.40Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop... [more]
Q8S9D14.6e-0525.93Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX... [more]
Q9S7R43.0e-0424.10Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_038906081.17.2e-4854.74pentatricopeptide repeat-containing protein At1g15480, mitochondrial-like [Benin... [more]
XP_023539395.11.7e-4449.79uncharacterized protein LOC111800051 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022933474.11.7e-4449.79pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur... [more]
XP_023539396.11.7e-4449.79pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor... [more]
KAG6596160.12.8e-4450.21Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A6J1EZV38.1e-4549.79pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... [more]
A0A6J1F5064.0e-4448.96pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... [more]
A0A6J1I5241.2e-4348.96pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... [more]
A0A6J1I6432.6e-4348.96pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor... [more]
A0A6J1I2N12.6e-4348.96pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 11..41
e-value: 0.7
score: 10.3
coord: 98..121
e-value: 0.058
score: 13.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..66
e-value: 9.9E-7
score: 30.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 67..149
e-value: 1.5E-6
score: 29.9
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 74..145
coord: 1..62
NoneNo IPR availablePANTHERPTHR45717:SF15OS01G0280400 PROTEINcoord: 74..145
coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002319Bhi11M002319mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding