Bhi11G002088 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G002088
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Histone-lysine N-methyltransferase ATXR4
Location	chr11: 67575190 .. 67575621 (+)
RNA-Seq Expression	Bhi11G002088
Synteny	Bhi11G002088

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGACTTCCTTGGTGCGTTACGGCCGTTGGATTTCCCGGTTCAAATTCCCATACTCTCCGGCCAAGTCATTTTCCTCTCCGTCGCCTTTCTCCTCCGCCGCCGGACTCCACAATGCCGATTCCACCTCTCCCGGCGGTCCACCACCTATACGAGTCTCGCTCACCGACACTGCTGGTCGCGGTGTTTTCGCCACTCGAAAGATCGGTGCCGGAGAACTCATACACACAGCCAAACCACTCGTCGCTCACCCTTCCCTGTTTTCTATCAACCATGTTTGCAATTTCTGCCTGCGGAATCTGCAGAGAAATGCTAACGTCGACTTCGATGCTCATCGTGCATCGTTCTGCAGTGAAGAGTGTGAACGACATTCCAAGGTATCAGTACAATCATATTCAATCACTTCAATATGTTTTCGGTTAGGTTAA

mRNA sequence

ATGGCGCCGACTTCCTTGGTGCGTTACGGCCGTTGGATTTCCCGGTTCAAATTCCCATACTCTCCGGCCAAGTCATTTTCCTCTCCGTCGCCTTTCTCCTCCGCCGCCGGACTCCACAATGCCGATTCCACCTCTCCCGGCGGTCCACCACCTATACGAGTCTCGCTCACCGACACTGCTGGTCGCGGTGTTTTCGCCACTCGAAAGATCGGTGCCGGAGAACTCATACACACAGCCAAACCACTCGTCGCTCACCCTTCCCTGTTTTCTATCAACCATGTTTGCAATTTCTGCCTGCGGAATCTGCAGAGAAATGCTAACGTCGACTTCGATGCTCATCGTGCATCGTTCTGCAGTGAAGAGTGTGAACGACATTCCAAGGTATCAGTACAATCATATTCAATCACTTCAATATGTTTTCGGTTAGGTTAA

Coding sequence (CDS)

ATGGCGCCGACTTCCTTGGTGCGTTACGGCCGTTGGATTTCCCGGTTCAAATTCCCATACTCTCCGGCCAAGTCATTTTCCTCTCCGTCGCCTTTCTCCTCCGCCGCCGGACTCCACAATGCCGATTCCACCTCTCCCGGCGGTCCACCACCTATACGAGTCTCGCTCACCGACACTGCTGGTCGCGGTGTTTTCGCCACTCGAAAGATCGGTGCCGGAGAACTCATACACACAGCCAAACCACTCGTCGCTCACCCTTCCCTGTTTTCTATCAACCATGTTTGCAATTTCTGCCTGCGGAATCTGCAGAGAAATGCTAACGTCGACTTCGATGCTCATCGTGCATCGTTCTGCAGTGAAGAGTGTGAACGACATTCCAAGGTATCAGTACAATCATATTCAATCACTTCAATATGTTTTCGGTTAGGTTAA

Protein sequence

MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTAGRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSEECERHSKVSVQSYSITSICFRLG

Homology

[Close]

BLAST of Bhi11G002088 vs. TAIR 10
Match: AT5G06620.1 (SET domain protein 38 )

HSP 1 Score: 107.8 bits (268), Expect = 7.1e-24
Identity = 63/127 (49.61%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           M+  +L RY R  SR        K+ ++P  FSS+A   N D     GPPPIRV LT++A
Sbjct: 1   MSRLALNRYSRCFSRL-------KTLTTPLFFSSSAA-SNRDGDYQIGPPPIRVGLTESA 60

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GR VFATRKIGAG+LIHTAKP+VA PSL  ++ VC  CL+ L  +A   F+    S+CS+
Sbjct: 61  GRAVFATRKIGAGDLIHTAKPVVACPSLLKLDSVCYLCLKKLMGSAK--FEDRGVSYCSQ 117

Query: 121 ECERHSK 128
           EC+ +SK
Sbjct: 121 ECQENSK 117

[Close]

BLAST of Bhi11G002088 vs. ExPASy Swiss-Prot
Match: Q9FG08 (Histone-lysine N-methyltransferase ATXR4 OS=Arabidopsis thaliana OX=3702 GN=ATXR4 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 63/127 (49.61%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           M+  +L RY R  SR        K+ ++P  FSS+A   N D     GPPPIRV LT++A
Sbjct: 1   MSRLALNRYSRCFSRL-------KTLTTPLFFSSSAA-SNRDGDYQIGPPPIRVGLTESA 60

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GR VFATRKIGAG+LIHTAKP+VA PSL  ++ VC  CL+ L  +A   F+    S+CS+
Sbjct: 61  GRAVFATRKIGAGDLIHTAKPVVACPSLLKLDSVCYLCLKKLMGSAK--FEDRGVSYCSQ 117

Query: 121 ECERHSK 128
           EC+ +SK
Sbjct: 121 ECQENSK 117

[Close]

BLAST of Bhi11G002088 vs. NCBI nr
Match: XP_038904084.1 (histone-lysine N-methyltransferase ATXR4 isoform X3 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA
Sbjct: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE
Sbjct: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120

Query: 121 ECERHSKV 129
           ECERHSKV
Sbjct: 121 ECERHSKV 128

[Close]

BLAST of Bhi11G002088 vs. NCBI nr
Match: XP_038904081.1 (histone-lysine N-methyltransferase ATXR4 isoform X1 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA
Sbjct: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE
Sbjct: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120

Query: 121 ECERHSKV 129
           ECERHSKV
Sbjct: 121 ECERHSKV 128

[Close]

BLAST of Bhi11G002088 vs. NCBI nr
Match: XP_038904082.1 (histone-lysine N-methyltransferase ATXR4 isoform X2 [Benincasa hispida] >XP_038904083.1 histone-lysine N-methyltransferase ATXR4 isoform X2 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA
Sbjct: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE
Sbjct: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120

Query: 121 ECERHSKV 129
           ECERHSKV
Sbjct: 121 ECERHSKV 128

[Close]

BLAST of Bhi11G002088 vs. NCBI nr
Match: KAE8645780.1 (hypothetical protein Csa_017113 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MA  SLVR+GRWISRFKFPY+ AK FSSPSPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 9   MASCSLVRFGRWISRFKFPYTQAKPFSSPSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 68

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSL SI+HVCNFCL+ LQR ANVD DA RASFCSE
Sbjct: 69  GRGVFATRKIGAGELIHTAKPLVAHPSLSSIHHVCNFCLQKLQRYANVDSDARRASFCSE 128

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 129 ECEQHSKV 136

[Close]

BLAST of Bhi11G002088 vs. NCBI nr
Match: XP_031745178.1 (LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR4-like [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MA  SLVR+GRWISRFKFPY+ AK FSSPSPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 9   MASCSLVRFGRWISRFKFPYTQAKPFSSPSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 68

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSL SI+HVCNFCL+ LQR ANVD DA RASFCSE
Sbjct: 69  GRGVFATRKIGAGELIHTAKPLVAHPSLSSIHHVCNFCLQKLQRYANVDSDARRASFCSE 128

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 129 ECEQHSKV 136

[Close]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL
Match: A0A0A0LEB8 (SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G797580 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.7e-54
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MA  SLVR+GRWISRFKFPY+ AK FSSPSPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 9   MASCSLVRFGRWISRFKFPYTQAKPFSSPSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 68

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPSL SI+HVCNFCL+ LQR ANVD DA RASFCSE
Sbjct: 69  GRGVFATRKIGAGELIHTAKPLVAHPSLSSIHHVCNFCLQKLQRYANVDSDARRASFCSE 128

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 129 ECEQHSKV 136

[Close]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL
Match: A0A5A7TLN4 (Histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00880 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAP SL+R+GRWISRFKFPYS A  FSS SPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 26  MAPCSLLRFGRWISRFKFPYSQANPFSSLSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 85

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPS  SI++VC FCLR L+RNANVD DA RASFCSE
Sbjct: 86  GRGVFATRKIGAGELIHTAKPLVAHPSPSSIHYVCYFCLRKLERNANVDSDA-RASFCSE 145

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 146 ECEQHSKV 152

[Close]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL
Match: A0A1S3B6K3 (histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486738 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAP SL+R+GRWISRFKFPYS A  FSS SPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 26  MAPCSLLRFGRWISRFKFPYSQANPFSSLSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 85

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPS  SI++VC FCLR L+RNANVD DA RASFCSE
Sbjct: 86  GRGVFATRKIGAGELIHTAKPLVAHPSPSSIHYVCYFCLRKLERNANVDSDA-RASFCSE 145

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 146 ECEQHSKV 152

[Close]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL
Match: A0A1S4DUM0 (histone-lysine N-methyltransferase ATXR4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486738 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.9e-50
Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAP SL+R+GRWISRFKFPYS A  FSS SPFSS+AGL +ADS +PGGPPPIRVSLTD+A
Sbjct: 26  MAPCSLLRFGRWISRFKFPYSQANPFSSLSPFSSSAGLRDADSAAPGGPPPIRVSLTDSA 85

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPS  SI++VC FCLR L+RNANVD DA RASFCSE
Sbjct: 86  GRGVFATRKIGAGELIHTAKPLVAHPSPSSIHYVCYFCLRKLERNANVDSDA-RASFCSE 145

Query: 121 ECERHSKV 129
           ECE+HSK+
Sbjct: 146 ECEQHSKL 152

[Close]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL
Match: A0A5D3DPG6 (Histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005150 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.6e-50
Identity = 104/128 (81.25%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MAPTSLVRYGRWISRFKFPYSPAKSFSSPSPFSSAAGLHNADSTSPGGPPPIRVSLTDTA 60
           MAP SL+R+GRWISRFKFPYS A  FSS SPFSS+AGL +ADS +PGGPPPIRVSLTD+ 
Sbjct: 9   MAPCSLLRFGRWISRFKFPYSQANPFSSLSPFSSSAGLRDADSAAPGGPPPIRVSLTDSV 68

Query: 61  GRGVFATRKIGAGELIHTAKPLVAHPSLFSINHVCNFCLRNLQRNANVDFDAHRASFCSE 120
           GRGVFATRKIGAGELIHTAKPLVAHPS  SI++VC FCLR L+RNANVD DA RASFCSE
Sbjct: 69  GRGVFATRKIGAGELIHTAKPLVAHPSPSSIHYVCYFCLRKLERNANVDSDA-RASFCSE 128

Query: 121 ECERHSKV 129
           ECE+HSKV
Sbjct: 129 ECEQHSKV 135

The following BLAST results are available for this feature:

BLAST of Bhi11G002088 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06620.1	7.1e-24	49.61	SET domain protein 38	[more]

BLAST of Bhi11G002088 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG08	1.0e-22	49.61	Histone-lysine N-methyltransferase ATXR4 OS=Arabidopsis thaliana OX=3702 GN=ATXR...	[more]

BLAST of Bhi11G002088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904084.1	1.4e-66	100.00	histone-lysine N-methyltransferase ATXR4 isoform X3 [Benincasa hispida]	[more]
XP_038904081.1	1.4e-66	100.00	histone-lysine N-methyltransferase ATXR4 isoform X1 [Benincasa hispida]	[more]
XP_038904082.1	1.4e-66	100.00	histone-lysine N-methyltransferase ATXR4 isoform X2 [Benincasa hispida] >XP_0389...	[more]
KAE8645780.1	1.8e-53	84.38	hypothetical protein Csa_017113 [Cucumis sativus]	[more]
XP_031745178.1	1.8e-53	84.38	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR4-like [Cucumis sati...	[more]

BLAST of Bhi11G002088 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEB8	8.7e-54	84.38	SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G797580 PE=4 SV...	[more]
A0A5A7TLN4	2.6e-50	82.03	Histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3B6K3	2.6e-50	82.03	histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S4DUM0	5.9e-50	81.25	histone-lysine N-methyltransferase ATXR4 isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5D3DPG6	7.6e-50	81.25	Histone-lysine N-methyltransferase ATXR4 isoform X1 OS=Cucumis melo var. makuwa ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 94..127 e-value: 3.3E-9 score: 38.9
None	No IPR available	GENE3D	2.170.270.10	SET domain	coord: 63..93 e-value: 3.3E-9 score: 38.9
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 50..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002088	Bhi11M002088	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity