Bhi11G002064 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCATAATCAAATACTTTTTCATACATAAACTCTTCATCTTCTCCAATTGTAAAATGACCAAATAATCCAACAAGCAGCCAAACAGAAATTGACTTGGTACTAAAATTATATTATATTGCAATCCAGAGAGAGAATAAATCAATTCTTTGTCATTTAATCATTATATAAGTTCCAAACTCTTTCGTTCCTAATTCAAGACGGAAAAATCAAAGACGAAGAAGAAGAATCTAACAAAATTGCGAAGCCATAGCGCATAATTGCAGAACAATGATGAACTCCGCCGCCGCCGCGAGGAATCAATTGCAATTGCGGGGTCCGAGGCCGCCGCCATTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATAATCCGCTTCCGATTCCGAACCGACGCGATCACCGTTCTCCGGTAATCATTTACCTCCGATCCCCGAAGATCATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGCCTCACCGGAAACCGATCCTCTGTCCCCGTAGTCGGGTCGTCCTGTTCTGCGATTGAATTAATTACGGATCATTCTAGTGAGGAAATTGTATCTGCTTGCAATTGCATTCCGTCGTAGCTTCCGCCATTCCACGGCGGATCCGTCGTCGATTTGGTAGCTTTTTTTCTGCAGGCGGTTATTTATAGCTGTAGCCGAGAAAGTGGTTATCACTGATTCACTAGTTGTATATGATTATTGTTTGGAAAGGAAGATCATTTTCCAATTTACAAA GGCATAATCAAATACTTTTTCATACATAAACTCTTCATCTTCTCCAATTGTAAAATGACCAAATAATCCAACAAGCAGCCAAACAGAAATTGACTTGGTACTAAAATTATATTATATTGCAATCCAGAGAGAGAATAAATCAATTCTTTGTCATTTAATCATTATATAAGTTCCAAACTCTTTCGTTCCTAATTCAAGACGGAAAAATCAAAGACGAAGAAGAAGAATCTAACAAAATTGCGAAGCCATAGCGCATAATTGCAGAACAATGATGAACTCCGCCGCCGCCGCGAGGAATCAATTGCAATTGCGGGGTCCGAGGCCGCCGCCATTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATAATCCGCTTCCGATTCCGAACCGACGCGATCACCGTTCTCCGGTAATCATTTACCTCCGATCCCCGAAGATCATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGCCTCACCGGAAACCGATCCTCTGTCCCCGTAGTCGGGTCGTCCTGTTCTGCGATTGAATTAATTACGGATCATTCTAGTGAGGAAATTGTATCTGCTTGCAATTGCATTCCGTCGTAGCTTCCGCCATTCCACGGCGGATCCGTCGTCGATTTGGTAGCTTTTTTTCTGCAGGCGGTTATTTATAGCTGTAGCCGAGAAAGTGGTTATCACTGATTCACTAGTTGTATATGATTATTGTTTGGAAAGGAAGATCATTTTCCAATTTACAAA ATGATGAACTCCGCCGCCGCCGCGAGGAATCAATTGCAATTGCGGGGTCCGAGGCCGCCGCCATTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATAATCCGCTTCCGATTCCGAACCGACGCGATCACCGTTCTCCGGTAATCATTTACCTCCGATCCCCGAAGATCATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGCCTCACCGGAAACCGATCCTCTGTCCCCGTAGTCGGGTCGTCCTGTTCTGCGATTGAATTAATTACGGATCATTCTAGTGAGGAAATTGTATCTGCTTGCAATTGCATTCCGTCGTAG MMNSAAAARNQLQLRGPRPPPLTVNKSSTNIFKKSTKNNPLPIPNRRDHRSPVIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVPVVGSSCSAIELITDHSSEEIVSACNCIPS Homology
BLAST of Bhi11G002064 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 ) HSP 1 Score: 64.7 bits (156), Expect = 5.5e-11 Identity = 38/81 (46.91%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Bhi11G002064 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07 Identity = 38/98 (38.78%), Postives = 43/98 (43.88%), Query Frame = 0
BLAST of Bhi11G002064 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein ) HSP 1 Score: 51.6 bits (122), Expect = 4.8e-07 Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of Bhi11G002064 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding ) HSP 1 Score: 50.8 bits (120), Expect = 8.2e-07 Identity = 36/98 (36.73%), Postives = 43/98 (43.88%), Query Frame = 0
BLAST of Bhi11G002064 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein ) HSP 1 Score: 50.8 bits (120), Expect = 8.2e-07 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 7.8e-10 Identity = 38/81 (46.91%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.8e-06 Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 36/98 (36.73%), Postives = 43/98 (43.88%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Bhi11G002064 vs. NCBI nr
Match: KAA0043778.1 (protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucumis melo var. makuwa]) HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40 Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 0
BLAST of Bhi11G002064 vs. NCBI nr
Match: XP_008443599.1 (PREDICTED: protein MKS1-like [Cucumis melo]) HSP 1 Score: 173.7 bits (439), Expect = 9.0e-40 Identity = 90/108 (83.33%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Bhi11G002064 vs. NCBI nr
Match: KGN59247.1 (hypothetical protein Csa_002000 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38 Identity = 91/115 (79.13%), Postives = 97/115 (84.35%), Query Frame = 0
BLAST of Bhi11G002064 vs. NCBI nr
Match: KAG6596645.1 (VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028183.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 152.5 bits (384), Expect = 2.2e-33 Identity = 84/113 (74.34%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of Bhi11G002064 vs. NCBI nr
Match: XP_041027964.1 (protein MKS1-like [Juglans microcarpa x Juglans regia]) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13 Identity = 50/90 (55.56%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy TrEMBL
Match: A0A5D3DP92 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004940 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.8e-41 Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy TrEMBL
Match: A0A1S3B975 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.4e-40 Identity = 90/108 (83.33%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy TrEMBL
Match: A0A0A0LEW5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.3e-39 Identity = 91/115 (79.13%), Postives = 97/115 (84.35%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy TrEMBL
Match: A0A2N9GB07 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.1e-14 Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Bhi11G002064 vs. ExPASy TrEMBL
Match: A0A1R3JJT0 (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05625 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.7e-12 Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|