Bhi11G002038 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G002038
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type domain-containing protein
Location	chr11: 65868998 .. 65869756 (+)
RNA-Seq Expression	Bhi11G002038
Synteny	Bhi11G002038

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTATTTAAATTTCTTATTTGGGTCTTAACCATTTCTATTTCTTCCCTCTTCTCATCCATGGCAGAATCCAAAACTCCCCTTCTACTTCTCACCTTCGATCCCTTTCCTTTCCCTCCATGAGCTCCTCCACGGACTCCGACGGCGGTGACGTCGGCAGTTTCCCCTACGTCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTCTGCACCAGAACCACCGCTCCGCCGCCGAATCGCCGTTTTCGGCAGGGGGAACGGCGGGATTTCGTCGTCGACTTCGGACCGGGCCTTGAAGATGATGTAATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTAGGGGGAAATTTGAAGTCCGCCGCCGCGAGCGGTTGTTCGATTTGTTTGGGGGATTATAAAAACGACGACGTTTTGCGGTTGTTGCCGGATTGTGGCCATTTGTTTCACAGCGGTTGTATTGATCCGTGGTTACGGCTGAACCCTAGCTGCCCTGTTTGCAGAACTTCGCCGGTGCCGACGCCGATTTCCACCCCTTTGGCGGAGGTGGTTCCGTTGGCCATCGGAAGGAGTTGAAGAAACTGACCTGTAAATAAATATTTTTTTTCCTATAGCAATACTTTCTTTTCTTTTCTCTTTTTTCCTTATTTTGTTAACAAAGTTGTAATAATTTTCTATTTTAGGTTAAAGTCAAATTATAAATTTCAAAATTTAAAAAGTTTTTCTA

mRNA sequence

TAATTATTTAAATTTCTTATTTGGGTCTTAACCATTTCTATTTCTTCCCTCTTCTCATCCATGGCAGAATCCAAAACTCCCCTTCTACTTCTCACCTTCGATCCCTTTCCTTTCCCTCCATGAGCTCCTCCACGGACTCCGACGGCGGTGACGTCGGCAGTTTCCCCTACGTCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTCTGCACCAGAACCACCGCTCCGCCGCCGAATCGCCGTTTTCGGCAGGGGGAACGGCGGGATTTCGTCGTCGACTTCGGACCGGGCCTTGAAGATGATGTAATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTAGGGGGAAATTTGAAGTCCGCCGCCGCGAGCGGTTGTTCGATTTGTTTGGGGGATTATAAAAACGACGACGTTTTGCGGTTGTTGCCGGATTGTGGCCATTTGTTTCACAGCGGTTGTATTGATCCGTGGTTACGGCTGAACCCTAGCTGCCCTGTTTGCAGAACTTCGCCGGTGCCGACGCCGATTTCCACCCCTTTGGCGGAGGTGGTTCCGTTGGCCATCGGAAGGAGTTGAAGAAACTGACCTGTAAATAAATATTTTTTTTCCTATAGCAATACTTTCTTTTCTTTTCTCTTTTTTCCTTATTTTGTTAACAAAGTTGTAATAATTTTCTATTTTAGGTTAAAGTCAAATTATAAATTTCAAAATTTAAAAAGTTTTTCTA

Coding sequence (CDS)

ATGAGCTCCTCCACGGACTCCGACGGCGGTGACGTCGGCAGTTTCCCCTACGTCGTCGGAATTTCAGTCGGAATCCTCTTCCTCCTCACAACCCTTACAATCACTACCTATTTCTGCACCAGAACCACCGCTCCGCCGCCGAATCGCCGTTTTCGGCAGGGGGAACGGCGGGATTTCGTCGTCGACTTCGGACCGGGCCTTGAAGATGATGTAATTAATGGATATCCGAAGATTCTGTACTCGGAGGCGAAATTAGGGGGAAATTTGAAGTCCGCCGCCGCGAGCGGTTGTTCGATTTGTTTGGGGGATTATAAAAACGACGACGTTTTGCGGTTGTTGCCGGATTGTGGCCATTTGTTTCACAGCGGTTGTATTGATCCGTGGTTACGGCTGAACCCTAGCTGCCCTGTTTGCAGAACTTCGCCGGTGCCGACGCCGATTTCCACCCCTTTGGCGGAGGTGGTTCCGTTGGCCATCGGAAGGAGTTGA

Protein sequence

MSSSTDSDGGDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS

Homology

[Close]

BLAST of Bhi11G002038 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 3.7e-45
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 11  DVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERR------DFVVDFG 70
           D+G F Y +G+S+G+L L+TT+T+T+Y+CTR        +  Q   R        ++D  
Sbjct: 60  DIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVV 119

Query: 71  PGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGC 130
           PGL++D I  YPKILYSEAK         AS C+ICLGDYK   +LR LPDC HLFH  C
Sbjct: 120 PGLDEDTIQSYPKILYSEAK-----GPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKC 179

Query: 131 IDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           ID WLRLNP+CPVCRTSP+PTP+STPLAEVVPLA
Sbjct: 180 IDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLA 208

[Close]

BLAST of Bhi11G002038 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 82/171 (47.95%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 12  VGSFPYVVGISVGILFLLTTLTITTYFCTR-------TTAPPPNRRFRQG--------ER 71
           +G   Y +G+S+GIL L+TT+T+T+Y+CTR       TT P   RR R+         ER
Sbjct: 20  MGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQER 79

Query: 72  RDFVVDFGP-------GLEDDVINGYPKILYSEAKLGGNL--KSAAASGCSICLGDYKND 131
            DF  D          GL ++VI G+PK+ Y EA++  +L  +S+  S CSICL DYK  
Sbjct: 80  FDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKM 139

Query: 132 DVLRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           D++R+LPDC HLFH  C+DPWLRL+P+CPVCRTSP+P+P  TP+A+VVP +
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

[Close]

BLAST of Bhi11G002038 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 15  FPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFVV------------- 74
           F Y + I++G L LL+T+ +++Y C R +          G+R   V+             
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 75  -----DFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASG---CSICLGDYKNDDVLRLL 134
                D   GL+  VIN YPK  +S+     +       G   CSICL +YK  ++LR++
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMM 154

Query: 135 PDCGHLFHSGCIDPWLRLNPSCPVCRTSPVP----TPISTPLAEVVPLA 159
           P+C H FH  C+D WL+LN SCPVCR SP+P    TP+STPL+EVVPL+
Sbjct: 155 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of Bhi11G002038 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 17  YVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFVVDFGP-------GLED 76
           Y + I+V IL L++ + + +Y C R+ +       R     D V+D          GL+ 
Sbjct: 15  YGIAIAVSILVLISFIMLASYICIRSKSTG-----RDEATSDVVLDLPSPAAEVKLGLDR 74

Query: 77  DVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGCIDPWL 136
            VI  YP+I+  +++    L       CSICL DY+  + +R +P+C H FH+ C+D WL
Sbjct: 75  PVIESYPRIVLGDSR---RLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWL 134

Query: 137 RLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           R + +CP+CR SP P+ ++TPL+++VPLA
Sbjct: 135 RTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Bhi11G002038 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22
Identity = 63/174 (36.21%), Postives = 95/174 (54.60%), Query Frame = 0


Query: 17  YVVGISVGILFLLTTLTITTYFCTR-------TTAPPPNRRFRQGER-----------RD 76
           Y + I++G L L++T+ +++Y C R        +A   N      +R            D
Sbjct: 28  YSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAED 87

Query: 77  FVVDFG----PGLEDDVINGYPKILYSE---AKLGG---NLKSAAASGCSICLGDYKNDD 136
             ++ G     GL+  VIN YPK  +++   A + G   +      + CSICL +Y  ++
Sbjct: 88  DDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEE 147

Query: 137 VLRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVP----TPISTPLAEVVPLA 159
           +LR++P+C H FH  C+D WL+LN SCPVCR SP+P    TP STPL+EVVPL+
Sbjct: 148 MLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-44
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 11  DVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERR------DFVVDFG 70
           D+G F Y +G+S+G+L L+TT+T+T+Y+CTR        +  Q   R        ++D  
Sbjct: 60  DIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVV 119

Query: 71  PGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGC 130
           PGL++D I  YPKILYSEAK         AS C+ICLGDYK   +LR LPDC HLFH  C
Sbjct: 120 PGLDEDTIQSYPKILYSEAK-----GPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKC 179

Query: 131 IDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           ID WLRLNP+CPVCRTSP+PTP+STPLAEVVPLA
Sbjct: 180 IDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLA 208

[Close]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-39
Identity = 82/171 (47.95%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 12  VGSFPYVVGISVGILFLLTTLTITTYFCTR-------TTAPPPNRRFRQG--------ER 71
           +G   Y +G+S+GIL L+TT+T+T+Y+CTR       TT P   RR R+         ER
Sbjct: 20  MGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQER 79

Query: 72  RDFVVDFGP-------GLEDDVINGYPKILYSEAKLGGNL--KSAAASGCSICLGDYKND 131
            DF  D          GL ++VI G+PK+ Y EA++  +L  +S+  S CSICL DYK  
Sbjct: 80  FDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKM 139

Query: 132 DVLRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           D++R+LPDC HLFH  C+DPWLRL+P+CPVCRTSP+P+P  TP+A+VVP +
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

[Close]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 15  FPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFVV------------- 74
           F Y + I++G L LL+T+ +++Y C R +          G+R   V+             
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 75  -----DFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASG---CSICLGDYKNDDVLRLL 134
                D   GL+  VIN YPK  +S+     +       G   CSICL +YK  ++LR++
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMM 154

Query: 135 PDCGHLFHSGCIDPWLRLNPSCPVCRTSPVP----TPISTPLAEVVPLA 159
           P+C H FH  C+D WL+LN SCPVCR SP+P    TP+STPL+EVVPL+
Sbjct: 155 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-21
Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 17  YVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFVVDFGP-------GLED 76
           Y + I+V IL L++ + + +Y C R+ +       R     D V+D          GL+ 
Sbjct: 15  YGIAIAVSILVLISFIMLASYICIRSKSTG-----RDEATSDVVLDLPSPAAEVKLGLDR 74

Query: 77  DVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLFHSGCIDPWL 136
            VI  YP+I+  +++    L       CSICL DY+  + +R +P+C H FH+ C+D WL
Sbjct: 75  PVIESYPRIVLGDSR---RLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWL 134

Query: 137 RLNPSCPVCRTSPVPTPISTPLAEVVPLA 159
           R + +CP+CR SP P+ ++TPL+++VPLA
Sbjct: 135 RTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-21
Identity = 63/174 (36.21%), Postives = 95/174 (54.60%), Query Frame = 0


Query: 17  YVVGISVGILFLLTTLTITTYFCTR-------TTAPPPNRRFRQGER-----------RD 76
           Y + I++G L L++T+ +++Y C R        +A   N      +R            D
Sbjct: 28  YSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAED 87

Query: 77  FVVDFG----PGLEDDVINGYPKILYSE---AKLGG---NLKSAAASGCSICLGDYKNDD 136
             ++ G     GL+  VIN YPK  +++   A + G   +      + CSICL +Y  ++
Sbjct: 88  DDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEE 147

Query: 137 VLRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVP----TPISTPLAEVVPLA 159
           +LR++P+C H FH  C+D WL+LN SCPVCR SP+P    TP STPL+EVVPL+
Sbjct: 148 MLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]

BLAST of Bhi11G002038 vs. NCBI nr
Match: KGN59365.2 (hypothetical protein Csa_002562 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 135/162 (83.33%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSSSTDSDGGDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFV 60
           M+SS DS GGD+G FPY++GISVGILFLLTTLTITTY CTRTT PPPNRR  QG RRDFV
Sbjct: 1   MNSSPDSGGGDIGGFPYILGISVGILFLLTTLTITTYLCTRTTVPPPNRRLPQGGRRDFV 60

Query: 61  VDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLF 120
           VDF  GLED+VINGYPKILYSEAKL   L+SAA +GCSICL DYK+DDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAATNGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           H GCIDPWLRLNPSCPVCRTSPVPTPISTPLAEV+PLA+GR+
Sbjct: 121 HCGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVIPLAVGRN 162

[Close]

BLAST of Bhi11G002038 vs. NCBI nr
Match: KAA0043799.1 (RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK25334.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.4e-72
Identity = 135/162 (83.33%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSSSTDSDGGDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFV 60
           M+S +DS GGD+GSFP++VGISVGILFLLTTLTITTY CTRTT P PNRR +Q  RRDFV
Sbjct: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60

Query: 61  VDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLF 120
           VDF  GLED+VINGYPKILYSEAKL   L+SAAA+GCSICL DYK+DDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           H  CIDPWLRLNPSCPVCRTSP+PTPISTPLAEVVPLAIGRS
Sbjct: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 162

[Close]

BLAST of Bhi11G002038 vs. NCBI nr
Match: XP_022935317.1 (RING-H2 finger protein ATL70-like [Cucurbita moschata])

HSP 1 Score: 280.4 bits (716), Expect = 9.7e-72
Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGER 60
           M++ST S G    G+VG+FPY+VGISVG+LFLLTT+TI TY CTRTT P PNRR R GER
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDC 120
           RD +VDFGPGLED+ IN YPKILYSE KL G L+SAAASGCSICLGDYKN+DVLRLLPDC
Sbjct: 61  RDAIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           GH+FHSGCIDPWLRLNPSCPVCRTSPVPTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of Bhi11G002038 vs. NCBI nr
Match: XP_023528902.1 (RING-H2 finger protein ATL70 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGER 60
           M++ST S G    G+VG+FPY+VGISVG+LFLLTT+TI TY CTRTT P PNRR R GER
Sbjct: 1   MNNSTGSGGSDASGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDC 120
           RD +VDFGPGLED+ IN YPKILYSE KL G ++SAAASGCSICLGDYKN+DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKMESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           GH+FHSGCIDPWLRLNPSCPVCRTSPVPTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of Bhi11G002038 vs. NCBI nr
Match: KAG6580759.1 (putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017512.1 putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71
Identity = 133/165 (80.61%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGER 60
           M++ST S G    G+VG+FPY+VGISVG+LFLLTT+TI TY CTRTT P PNRR R GER
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDC 120
           RD +VDFGPGLED+ IN YPKILYSE KL G L+SAAASGCSICLGDYKN+DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGR 162
           GH+FHSGCIDPWLRLNPSCPVCRTSPVPTP+STPLAEVVPLA GR
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGR 165

[Close]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL
Match: A0A0A0LEU3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782740 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74
Identity = 136/162 (83.95%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSSSTDSDGGDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFV 60
           M+SS DS GGD+G FPY++GISVGILFLLTTLTITTY CTRTT PPPNRR  QG RRDFV
Sbjct: 1   MNSSPDSGGGDIGGFPYILGISVGILFLLTTLTITTYLCTRTTVPPPNRRLPQGGRRDFV 60

Query: 61  VDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLF 120
           VDF  GLED+VINGYPKILYSEAKL   L+SAA +GCSICL DYK+DDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAATNGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           H GCIDPWLRLNPSCPVCRTSPVPTPISTPLAEV+PLA+GRS
Sbjct: 121 HCGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVIPLAVGRS 162

[Close]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL
Match: A0A5A7TRH5 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004730 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 135/162 (83.33%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSSSTDSDGGDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGERRDFV 60
           M+S +DS GGD+GSFP++VGISVGILFLLTTLTITTY CTRTT P PNRR +Q  RRDFV
Sbjct: 1   MNSPSDSGGGDIGSFPFIVGISVGILFLLTTLTITTYLCTRTTVPQPNRRLQQEGRRDFV 60

Query: 61  VDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDCGHLF 120
           VDF  GLED+VINGYPKILYSEAKL   L+SAAA+GCSICL DYK+DDVLRLLPDCGHLF
Sbjct: 61  VDFVQGLEDEVINGYPKILYSEAKLERKLESAAANGCSICLVDYKDDDVLRLLPDCGHLF 120

Query: 121 HSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           H  CIDPWLRLNPSCPVCRTSP+PTPISTPLAEVVPLAIGRS
Sbjct: 121 HGSCIDPWLRLNPSCPVCRTSPLPTPISTPLAEVVPLAIGRS 162

[Close]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL
Match: A0A6J1F576 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111442240 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72
Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGER 60
           M++ST S G    G+VG+FPY+VGISVG+LFLLTT+TI TY CTRTT P PNRR R GER
Sbjct: 1   MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGER 60

Query: 61  RDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDC 120
           RD +VDFGPGLED+ IN YPKILYSE KL G L+SAAASGCSICLGDYKN+DVLRLLPDC
Sbjct: 61  RDAIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           GH+FHSGCIDPWLRLNPSCPVCRTSPVPTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL
Match: A0A6J1J186 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111481769 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.9e-71
Identity = 132/166 (79.52%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPPPNRRFRQGER 60
           M++ST S G    G+VG+FPY+VGISVG+LFLLTT+TI TY CTRTT P  NRR R GER
Sbjct: 1   MNNSTGSGGSDASGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQLNRRRRPGER 60

Query: 61  RDFVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDVLRLLPDC 120
           RD +VDFGPGLED+ IN YPKILYSE KL G ++SAAASGCSICLGDYKN+DVLRLLPDC
Sbjct: 61  RDVIVDFGPGLEDEAINEYPKILYSEKKLEGKMESAAASGCSICLGDYKNEDVLRLLPDC 120

Query: 121 GHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGRS 163
           GH+FHSGCIDPWLRLNPSCPVCRTSPVPTP+STPLAEVVPLA GRS
Sbjct: 121 GHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS 166

[Close]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL
Match: A0A5N5FYN1 (RING-H2 finger protein ATL70-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_011135 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48
Identity = 103/172 (59.88%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MSSSTDSDG----GDVGSFPYVVGISVGILFLLTTLTITTYFCTRTTAPP-PNRRFRQGE 60
           M++++DS G     ++GSF Y +G+SVG+L L+TT+T+ +YFC RT  PP P  R   G+
Sbjct: 1   MNATSDSGGFLGSNNIGSFGYGIGVSVGVLLLITTITLASYFCARTQQPPAPPTRRNAGD 60

Query: 61  RRD------FVVDFGPGLEDDVINGYPKILYSEAKLGGNLKSAAASGCSICLGDYKNDDV 120
             D      FVVD   GL+D+ I  YPK+LYSEAKL   +K + AS CSICL DYKN D+
Sbjct: 61  AMDPPGVENFVVDI--GLDDNTIQSYPKLLYSEAKL--QMKDSTASCCSICLADYKNSDM 120

Query: 121 LRLLPDCGHLFHSGCIDPWLRLNPSCPVCRTSPVPTPISTPLAEVVPLAIGR 162
           LRLLPDC HLFH  CIDPWLRLNP+CPVCRTSP+PTP+STPLAEVVPLA  R
Sbjct: 121 LRLLPDCRHLFHLKCIDPWLRLNPTCPVCRTSPIPTPLSTPLAEVVPLASRR 168

The following BLAST results are available for this feature:

BLAST of Bhi11G002038 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	3.7e-45	55.84	RING/U-box superfamily protein	[more]
AT5G06490.1	1.6e-40	47.95	RING/U-box superfamily protein	[more]
AT2G46160.1	1.0e-26	38.46	RING/U-box superfamily protein	[more]
AT5G07040.1	1.2e-22	35.57	RING/U-box superfamily protein	[more]
AT3G61550.1	3.4e-22	36.21	RING/U-box superfamily protein	[more]

BLAST of Bhi11G002038 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	5.2e-44	55.84	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	2.3e-39	47.95	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	1.4e-25	38.46	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9FL42	1.6e-21	35.57	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9M313	4.8e-21	36.21	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]

BLAST of Bhi11G002038 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59365.2	1.4e-73	83.33	hypothetical protein Csa_002562 [Cucumis sativus]	[more]
KAA0043799.1	3.4e-72	83.33	RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK25334.1 RING-H2...	[more]
XP_022935317.1	9.7e-72	80.72	RING-H2 finger protein ATL70-like [Cucurbita moschata]	[more]
XP_023528902.1	1.3e-71	80.12	RING-H2 finger protein ATL70 [Cucurbita pepo subsp. pepo]	[more]
KAG6580759.1	2.8e-71	80.61	putative RING-H2 finger protein ATL71, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Bhi11G002038 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEU3	3.0e-74	83.95	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782740 P...	[more]
A0A5A7TRH5	1.6e-72	83.33	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1F576	4.7e-72	80.72	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111442240 ...	[more]
A0A6J1J186	8.9e-71	79.52	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111481769 PE...	[more]
A0A5N5FYN1	2.1e-48	59.88	RING-H2 finger protein ATL70-like OS=Pyrus ussuriensis x Pyrus communis OX=24484...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 97..138 e-value: 8.2E-9 score: 45.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..139 e-value: 2.6E-14 score: 53.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 97..139 score: 12.813844
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 61..144 e-value: 2.1E-20 score: 74.2
None	No IPR available	PANTHER	PTHR46719:SF7	RING-H2 FINGER PROTEIN ATL71-RELATED	coord: 9..160
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 9..160
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 97..139 e-value: 6.0462E-21 score: 78.4977
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 71..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002038	Bhi11M002038	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding