Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA
mRNA sequence
ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA
Coding sequence (CDS)
ATGGTGATGAATTTGAATGATAAAATTGGGGGAAGTAGTAGCAGTATGGTGGGGGAGTTAGGGATTGTTCAATCGGAAGTGAATATGGGCGATTTGATGAATGGAGGAAATTCGATGGTGGGAATTGGCGAATTAGGCGGAACGGAAACGATTATTGTTGAAGGAGATGGCGATGAGAACATTTTGTTATCGGAGTGGAATTTTGGGGTAAATAACAATTCTGGAATGAGTGAGATTGAGAAGCTTGTGAACGACATTAATGGCGTTGGAGTTGAGGCTACTGTTAGTCCTATGGATTTCACTCACCAAGTCGGTTTTGGAATCGATGGTGACGTCAATGATGGAGACCCTATGGGAAGTCTGTATTCCGATGGCTGCTACTATGGCGACGGTGGTAGTGTAGGGATTGATATGAATGATGATGCAGAGATGTTGCTTCAAGGATTGTTTGAAAGTGGAATAAGCTGTAGCAATGGAAATGGAAATGAGAATAAGAATAATGAAGGTAAAGACGTTAAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA
Protein sequence
MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDENILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTHQVGFGIDGDVNDGDPMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNENKNNEGKDVKDDLLSKEWQNNFTP
Homology
BLAST of Bhi11G002034 vs. NCBI nr
Match:
XP_038904450.1 (MADS-box transcription factor PHERES 1-like [Benincasa hispida])
HSP 1 Score: 224.6 bits (571), Expect = 7.3e-55
Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
MVMN DKIGGSSSSMV ELG VQSEVNMGDLMNGGNSMV IGELGGTETIIVEGDGDEN
Sbjct: 200 MVMNSIDKIGGSSSSMVEELGFVQSEVNMGDLMNGGNSMVEIGELGGTETIIVEGDGDEN 259
Query: 61 ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTHQVGFGIDGDVNDGDPMGS 120
ILLSEWNFGVN+N GMSEIEKLVNDIN VGVEATVSP+DFTHQVGFGI GDVNDGDP G
Sbjct: 260 ILLSEWNFGVNDNFGMSEIEKLVNDINAVGVEATVSPIDFTHQVGFGIGGDVNDGDPTGI 319
Query: 121 LYSDGCYY 129
LY DGCYY
Sbjct: 320 LYFDGCYY 327
BLAST of Bhi11G002034 vs. NCBI nr
Match:
KAA0043801.1 (MADS-box transcription factor 50-like [Cucumis melo var. makuwa] >TYK25332.1 MADS-box transcription factor 50-like [Cucumis melo var. makuwa])
HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
MVMN NDKIGGSSSSM GELG VQ+E N DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 191 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 250
Query: 61 NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
N LLSEWNFG N++SGMSEIEKLVNDI GVG VE S MD +H+ G FGI+ +V G
Sbjct: 251 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 310
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
PMGS+Y+D G+++NDDAEM+L GL+E+GIS N NGN E+
Sbjct: 311 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 370
Query: 181 EGKDVKDDLLSKEWQNNFTP 188
E +D +DDLLSKEW NNFTP
Sbjct: 371 EDEDDEDDLLSKEWSNNFTP 379
BLAST of Bhi11G002034 vs. NCBI nr
Match:
XP_008442937.1 (PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo])
HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
MVMN NDKIGGSSSSM GELG VQ+E N DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 198 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 257
Query: 61 NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
N LLSEWNFG N++SGMSEIEKLVNDI GVG VE S MD +H+ G FGI+ +V G
Sbjct: 258 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 317
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
PMGS+Y+D G+++NDDAEM+L GL+E+GIS N NGN E+
Sbjct: 318 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 377
Query: 181 EGKDVKDDLLSKEWQNNFTP 188
E +D +DDLLSKEW NNFTP
Sbjct: 378 EDEDDEDDLLSKEWSNNFTP 386
BLAST of Bhi11G002034 vs. NCBI nr
Match:
XP_004136717.1 (uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hypothetical protein Csa_000777 [Cucumis sativus])
HSP 1 Score: 188.3 bits (477), Expect = 5.8e-44
Identity = 116/199 (58.29%), Postives = 136/199 (68.34%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLM--NGGNSMVGIGELGGTETIIVEGDGD 60
MVMN NDK GGSSSSM GELG VQSE N D+M GGNSM+ E+GGT TIIVEGDG+
Sbjct: 199 MVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMMEASEIGGTGTIIVEGDGE 258
Query: 61 ENILLSEWNFGVNNNSGMSEIEKLVNDINGVG-VEATVSPMDFTH-QVGFGIDGDVNDGD 120
EN LLSEWNFG N++ GMSEIEKLVNDI GVG E S MD +H Q FGI D N G
Sbjct: 259 ENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDLSHAQADFGI--DCNVGG 318
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGNENKNN------ 180
PMGSL++D G+D+NDD EM+L GLFE+ I+ + N NGN+ N
Sbjct: 319 PMGSLFTD----------GVDVNDDGEMMLSGLFENEITENENVNQNGNDQNNEEEDEEV 378
Query: 181 EGKDVKDDLLSKEWQNNFT 187
E +D +DD+LSKEW NNF+
Sbjct: 379 EDEDDEDDILSKEWSNNFS 385
BLAST of Bhi11G002034 vs. NCBI nr
Match:
XP_023539789.1 (uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 136.7 bits (343), Expect = 2.0e-28
Identity = 96/196 (48.98%), Postives = 115/196 (58.67%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
MVMN NDKIGGSSSSM GELG QSE N+ GGNSM+ + +LGG TI EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVVDLGGRTTITAEGDMDEN 258
Query: 61 ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
LL +WNFG GMSEIEKLV+++ GV+ SPMD + Q +GI GD
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGIIGD-------- 318
Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNE--------NKNNEGKD 180
GDG SV +AEM+L GLF SG + NG E N+ E ++
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGTRSRSSNGTENETLIEKVNEEEEEEE 363
Query: 181 VKDDLLSKEWQNNFTP 188
+DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363
BLAST of Bhi11G002034 vs. ExPASy TrEMBL
Match:
A0A5A7TQH1 (MADS-box transcription factor 50-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004710 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
MVMN NDKIGGSSSSM GELG VQ+E N DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 191 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 250
Query: 61 NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
N LLSEWNFG N++SGMSEIEKLVNDI GVG VE S MD +H+ G FGI+ +V G
Sbjct: 251 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 310
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
PMGS+Y+D G+++NDDAEM+L GL+E+GIS N NGN E+
Sbjct: 311 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 370
Query: 181 EGKDVKDDLLSKEWQNNFTP 188
E +D +DDLLSKEW NNFTP
Sbjct: 371 EDEDDEDDLLSKEWSNNFTP 379
BLAST of Bhi11G002034 vs. ExPASy TrEMBL
Match:
A0A1S3B6W2 (uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 123/200 (61.50%), Postives = 145/200 (72.50%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMN-GGNSMVGIGELGGTETIIVEGDGDE 60
MVMN NDKIGGSSSSM GELG VQ+E N DLMN GG+SMV + E+GGT TIIVEGDG+E
Sbjct: 198 MVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEVSEIGGTGTIIVEGDGEE 257
Query: 61 NILLSEWNFGVNNNSGMSEIEKLVNDINGVG--VEATVSPMDFTHQVG-FGIDGDVNDGD 120
N LLSEWNFG N++SGMSEIEKLVNDI GVG VE S MD +H+ G FGI+ +V G
Sbjct: 258 NNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDLSHEQGDFGINCNV-VGG 317
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGN------ENKNN 180
PMGS+Y+D G+++NDDAEM+L GL+E+GIS N NGN E+
Sbjct: 318 PMGSVYTD----------GVEVNDDAEMMLHGLYENGISGEENVNQNGNDQNELEEDDEV 377
Query: 181 EGKDVKDDLLSKEWQNNFTP 188
E +D +DDLLSKEW NNFTP
Sbjct: 378 EDEDDEDDLLSKEWSNNFTP 386
BLAST of Bhi11G002034 vs. ExPASy TrEMBL
Match:
A0A0A0LB39 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 2.8e-44
Identity = 116/199 (58.29%), Postives = 136/199 (68.34%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLM--NGGNSMVGIGELGGTETIIVEGDGD 60
MVMN NDK GGSSSSM GELG VQSE N D+M GGNSM+ E+GGT TIIVEGDG+
Sbjct: 199 MVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMMEASEIGGTGTIIVEGDGE 258
Query: 61 ENILLSEWNFGVNNNSGMSEIEKLVNDINGVG-VEATVSPMDFTH-QVGFGIDGDVNDGD 120
EN LLSEWNFG N++ GMSEIEKLVNDI GVG E S MD +H Q FGI D N G
Sbjct: 259 ENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDLSHAQADFGI--DCNVGG 318
Query: 121 PMGSLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCS---NGNGNENKNN------ 180
PMGSL++D G+D+NDD EM+L GLFE+ I+ + N NGN+ N
Sbjct: 319 PMGSLFTD----------GVDVNDDGEMMLSGLFENEITENENVNQNGNDQNNEEEDEEV 378
Query: 181 EGKDVKDDLLSKEWQNNFT 187
E +D +DD+LSKEW NNF+
Sbjct: 379 EDEDDEDDILSKEWSNNFS 385
BLAST of Bhi11G002034 vs. ExPASy TrEMBL
Match:
A0A6J1L3D4 (uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 6.3e-28
Identity = 97/196 (49.49%), Postives = 116/196 (59.18%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
MVMN NDKIGGSSSSM GELG QSE N+ GGNSM+ + +LGG TI EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVVDLGGRTTITAEGDMDEN 258
Query: 61 ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
LL +WNFG GMSEIEKLV+++ GV+ SPMD + Q +G+ GD
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGMIGD-------- 318
Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNEN-----KNNEGKDV-- 180
GDG SV +AEM+L GLF SG + NG EN K NE ++
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGSRSRSSNGTENETLIEKVNEEEEEEA 363
Query: 181 -KDDLLSKEWQNNFTP 188
+DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363
BLAST of Bhi11G002034 vs. ExPASy TrEMBL
Match:
A0A6J1F887 (MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443217 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 8.2e-28
Identity = 95/196 (48.47%), Postives = 114/196 (58.16%), Query Frame = 0
Query: 1 MVMNLNDKIGGSSSSMVGELGIVQSEVNMGDLMNGGNSMVGIGELGGTETIIVEGDGDEN 60
MVMN NDKIGGSSSSM GELG QSE N+ GGNSM+ +LGG TI EGD DEN
Sbjct: 199 MVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEAVDLGGRTTITAEGDMDEN 258
Query: 61 ILLSEWNFGVNNNSGMSEIEKLVNDINGVGVEATVSPMDFTH-QVGFGIDGDVNDGDPMG 120
LL +WNFG GMSEIEKLV+++ GV+ SPMD + Q +G+ GD
Sbjct: 259 NLLCDWNFG-GTGCGMSEIEKLVSNLG--GVDDNASPMDLANPQANYGMIGD-------- 318
Query: 121 SLYSDGCYYGDGGSVGIDMNDDAEMLLQGLFESGISCSNGNGNE--------NKNNEGKD 180
GDG SV +AEM+L GLF SG + NG E N+ E ++
Sbjct: 319 --------GGDGASV------EAEMMLHGLFGSGSRSRSSNGTENETLIEKVNEEEEEEE 363
Query: 181 VKDDLLSKEWQNNFTP 188
+DDLL+KEW NNFTP
Sbjct: 379 DEDDLLNKEWPNNFTP 363
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038904450.1 | 7.3e-55 | 89.84 | MADS-box transcription factor PHERES 1-like [Benincasa hispida] | [more] |
KAA0043801.1 | 1.1e-47 | 61.50 | MADS-box transcription factor 50-like [Cucumis melo var. makuwa] >TYK25332.1 MAD... | [more] |
XP_008442937.1 | 1.1e-47 | 61.50 | PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo] | [more] |
XP_004136717.1 | 5.8e-44 | 58.29 | uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hypothetical ... | [more] |
XP_023539789.1 | 2.0e-28 | 48.98 | uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TQH1 | 5.5e-48 | 61.50 | MADS-box transcription factor 50-like OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A1S3B6W2 | 5.5e-48 | 61.50 | uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=... | [more] |
A0A0A0LB39 | 2.8e-44 | 58.29 | MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE... | [more] |
A0A6J1L3D4 | 6.3e-28 | 49.49 | uncharacterized protein LOC111498747 OS=Cucurbita maxima OX=3661 GN=LOC111498747... | [more] |
A0A6J1F887 | 8.2e-28 | 48.47 | MADS-box transcription factor PHERES 1-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |