Bhi11G001997 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G001997
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr11: 65034565 .. 65034795 (+)
RNA-Seq Expression	Bhi11G001997
Synteny	Bhi11G001997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

mRNA sequence

ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

Coding sequence (CDS)

ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

Protein sequence

MLTSKAPARVSPLNSARSSPLHVNLWPDEELEKGGEKATGTAAAVAMAVVGLCRRRMIRGVDVLYELSHSHFCILF

Homology

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BLAST of Bhi11G001997 vs. ExPASy TrEMBL
Match: A0A0A0LER2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.8e-04
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 28 DEELEKGGEKATGTAAAVAMAVVGLCRRRMIRGVDVLYEL 68
          DEELEKGGEKA G A+AVA+A+VGLCRRR  R V    E+
Sbjct: 43 DEELEKGGEKAAGAASAVAVAMVGLCRRRDGRAVKGAVEM 82

The following BLAST results are available for this feature:

BLAST of Bhi11G001997 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G001997 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G001997 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G001997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LER2	9.8e-04	67.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001997	Bhi11M001997	mRNA